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Physiological role of regulation involving Crh in Geobacillus kaustophilus

Research Project

Project/Area Number 18H02128
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Review Section Basic Section 38020:Applied microbiology-related
Research InstitutionKobe University

Principal Investigator

Yoshida Ken-ichi  神戸大学, 科学技術イノベーション研究科, 教授 (20230732)

Co-Investigator(Kenkyū-buntansha) 石川 周  神戸大学, 科学技術イノベーション研究科, 准教授 (30359872)
Project Period (FY) 2018-04-01 – 2022-03-31
Project Status Completed (Fiscal Year 2021)
Budget Amount *help
¥17,160,000 (Direct Cost: ¥13,200,000、Indirect Cost: ¥3,960,000)
Fiscal Year 2021: ¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2020: ¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2019: ¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2018: ¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
KeywordsGeobacillus kaustophilus / inositol / catabolite repression / 5-carbon sugar / transcription / カタボライト抑制 / イノシトール / 転写制御 / タンパク質相互作用 / 5炭糖 / リボース / キシロース / Crh / トランスクリプトーム / 細胞内クロスリンク
Outline of Final Research Achievements

Crh in Gram-positive bacteria is supposed to be involved in glucose catabolite repression. It was found that the iol gene cluster for inositol metabolism in Geobacillus kaustophilus (GK) was not repressed by glucose but by excessive phosphorylation of Crh. In addition, phosphorylated Crh forms a complex with CcpA to exert the repression. The iol genes were repressed by xylose and ribose, indicating that Crh is required for the repression by these 5-carbon sugars. In addition, the expression of hpr was markedly lower in GK, whereas that of crh was higher, suggesting that in GK Crh might be responsible for the catabolite repression by 5-carbon sugars.

Academic Significance and Societal Importance of the Research Achievements

本研究最大の成果は、GKのiol遺伝子群が5炭糖の存在下で起こる抑制機構にCrhが関わっていることを示したことである。しかし、これがグラム陽性菌全般に演繹されるか否かは今後の研究結果を待たねばならない。しかし、この研究成果は6炭糖による抑制をHPrが担い、一方5炭糖によるものをCrhが担うというように両者が機能を分担している可能性を示唆しており、このような考え方が議論されたことはなく、想定がなされたことすらない。即ち、この可能性の真偽を問い、それを明らかにすることができればグラム陽性菌のカタボライト抑制の学術的理解を根本から革新するものとなるだろう。

Report

(5 results)
  • 2021 Annual Research Report   Final Research Report ( PDF )
  • 2020 Annual Research Report
  • 2019 Annual Research Report
  • 2018 Annual Research Report
  • Research Products

    (16 results)

All 2022 2021 2020 2019 Other

All Int'l Joint Research (3 results) Journal Article (10 results) (of which Int'l Joint Research: 6 results,  Peer Reviewed: 10 results,  Open Access: 10 results) Presentation (3 results)

  • [Int'l Joint Research] Newcastle University(英国)

    • Related Report
      2021 Annual Research Report
  • [Int'l Joint Research] Universidad Autonoma Madrid(スペイン)

    • Related Report
      2021 Annual Research Report
  • [Int'l Joint Research] Newcastle University(英国)

    • Related Report
      2019 Annual Research Report
  • [Journal Article] Functional analysis of a gene cluster for putative bacteriocin deduced from the genome sequence of <i>Aeribacillus pallidus</i> PI82022

    • Author(s)
      Kita Kyosuke、Yoshida Sanako、Ishikawa Shu、Yoshida Ken-ichi
    • Journal Title

      The Journal of General and Applied Microbiology

      Volume: 68 Issue: 2 Pages: 87-94

    • DOI

      10.2323/jgam.2021.11.003

    • ISSN
      0022-1260, 1349-8037
    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A novel method for transforming Geobacillus kaustophilus with a chromosomal segment of Bacillus subtilis transferred via pLS20-dependent conjugation2022

    • Author(s)
      Mori Kotaro、Fukui Kaho、Amatsu Ryotaro、Ishikawa Shu、Verrone Valeria、Wipat Anil、Meijer Wilfried J. J.、Yoshida Ken-ichi
    • Journal Title

      Microbial Cell Factories

      Volume: 21 Issue: 1 Pages: 34-34

    • DOI

      10.1186/s12934-022-01759-8

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Conjugation Operons in Gram-Positive Bacteria with and without Antitermination Systems2022

    • Author(s)
      Miguel-Arribas Andres、Wu Ling Juan、Michaelis Claudia、Yoshida Ken-ichi、Grohmann Elisabeth、Meijer Wilfried J. J.
    • Journal Title

      Microorganisms

      Volume: 10 Issue: 3 Pages: 587-587

    • DOI

      10.3390/microorganisms10030587

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Assessment of Bacillus subtilis Plasmid pLS20 Conjugation in the Absence of Quorum Sensing Repression2021

    • Author(s)
      Mori Kotaro、Verrone Valeria、Amatsu Ryotaro、Fukui Kaho、Meijer Wilfried J. J.、Ishikawa Shu、Wipat Anil、Yoshida Ken-ichi
    • Journal Title

      Microorganisms

      Volume: 9 Issue: 9 Pages: 1931-1931

    • DOI

      10.3390/microorganisms9091931

    • NAID

      120007159899

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Identification of a repressor for the two iol operons required for inositol catabolism in Geobacillus kaustophilus2021

    • Author(s)
      Ken-ichi Yoshida, Yusuke Shirae, Ryo Nishimura, Kaho Fukui, Shu Ishikawa
    • Journal Title

      Microbiology

      Volume: 167 Issue: 1 Pages: 1-11

    • DOI

      10.1099/mic.0.001008

    • NAID

      120007097057

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Complete Genome Sequence of Thermophilic Bacterium Aeribacillus pallidus PI82020

    • Author(s)
      Kyosuke Kita, Atsushi Ishida, Kosei Tanaka, Shu Ishikawa, Ken-ichi Yoshida
    • Journal Title

      Microbiol. Resour. Announc

      Volume: 9 Issue: 17

    • DOI

      10.1128/mra.00224-20

    • NAID

      120006873010

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Complete Genome Sequence of Nitrogen-Fixing Paenibacillus sp. Strain URB8-2, Isolated from the Rhizosphere of Wild Grass2020

    • Author(s)
      Kyosuke Kita, Shu Ishikawa, Ken-ichi Yoshida
    • Journal Title

      Microbiol. Resour. Announc.

      Volume: 9 Issue: 36

    • DOI

      10.1128/mra.00814-20

    • NAID

      120006895440

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A bacterial cell factory converting glucose into scyllo-inositol, a therapeutic agent for Alzheimer's disease2020

    • Author(s)
      Michon C, Kang CM, Karpenko S, Tanaka K, Ishikawa S, Yoshida KI
    • Journal Title

      Commun Biol.

      Volume: 3 Issue: 1 Pages: 95-95

    • DOI

      10.1038/s42003-020-0814-7

    • NAID

      120006818792

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Complete Genome Sequence of a Thermophilic Bacterium Aeribacillus pallidus PI82020

    • Author(s)
      Kyosuke Kita, Atsushi Ishida, Kosei Tanaka, Shu Ishikawa, Ken-ichi Yoshida
    • Journal Title

      Microbiol. Resour. Announc.

      Volume: -

    • NAID

      120006873010

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Production of <i>scyllo</i>-Inositol: Conversion of Rice Bran into a Promising Disease-Modifying Therapeutic Agent for Alzheimer’s Disease2019

    • Author(s)
      Ken-ichi YOSHIDA, Shu ISHIKAWA
    • Journal Title

      Journal of Nutritional Science and Vitaminology

      Volume: 65 Issue: Supplement Pages: S139-S142

    • DOI

      10.3177/jnsv.65.S139

    • NAID

      130007729783

    • ISSN
      0301-4800, 1881-7742
    • Year and Date
      2019-10-11
    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] 好熱バチルスに見いだされた5炭糖によるカタボライト抑制2022

    • Author(s)
      福井香帆、石川周、吉田健一
    • Organizer
      日本農芸化学会2022年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Geobacillus kaustophilusのCrhによるイノシトール代謝系遺伝子群の発 現制御機構の解明2021

    • Author(s)
      福井香帆、石川周、吉田健一
    • Organizer
      2021年度グラム陽性菌ゲノム機能会議
    • Related Report
      2021 Annual Research Report
  • [Presentation] Geobacillus kaustophilusのイノシトール代謝系遺伝子群の5炭糖によるカタボライト抑制にCrhが関与する可能性2021

    • Author(s)
      福井香帆、石川周、吉田健一
    • Organizer
      日本農芸化学会関西支部第518回講演会
    • Related Report
      2021 Annual Research Report

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Published: 2018-04-23   Modified: 2023-01-30  

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