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Maturation process of prokaryotic 30S ribosome

Research Project

Project/Area Number 18H02163
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Review Section Basic Section 38060:Applied molecular and cellular biology-related
Research InstitutionHirosaki University

Principal Investigator

Hyouta Himeno  弘前大学, 農学生命科学部, 教授 (80208785)

Project Period (FY) 2018-04-01 – 2023-03-31
Project Status Completed (Fiscal Year 2022)
Budget Amount *help
¥17,680,000 (Direct Cost: ¥13,600,000、Indirect Cost: ¥4,080,000)
Fiscal Year 2022: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Fiscal Year 2021: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Fiscal Year 2020: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Fiscal Year 2019: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Fiscal Year 2018: ¥7,800,000 (Direct Cost: ¥6,000,000、Indirect Cost: ¥1,800,000)
Keywordsリボソーム / リボソーム成熟 / リボソーム生合成 / リボソーム成熟因子
Outline of Final Research Achievements

Based on the "relationship between RsgA and RbfA" that I have clarified so far, I focused four types of maturation factors (RsgA, RbfA, RimM, Era) required for the late stage of the bacterial ribosomal 30S subunit biosynthesis to analyze the role of each factor on 30S subunit maturation. In addition, by conducting structural analysis of biosynthetic intermediates, we analyzed the molecular mechanisms in detail, leading to better understanding of the maturation process of the ribosome. We will establish a system for in vitro assembly of the mature 30S subunits from 30S subunit biosynthetic intermediates accumulated in maturation factor-deficient cells, and use this as a basis for the development of novel antibiotics.

Academic Significance and Societal Importance of the Research Achievements

リボソームは、重要な機能部位を多数持ち、また原核生物と真核生物でその構造が大きく異なることから、抗生物質開発の有力なターゲットとなってきた。現在、リボソームの成熟過程を標的とする次世代の抗生物質の開発に期待が集まっている。本研究の成果は、リボソームの生合成中間体を標的とする抗生物質の設計に向けての基礎となるものである。また、各段階の生合成中間体から成熟した30Sサブユニットを再構成することが可能となれば、新たな抗生物質スクリーニング系の開発ための基礎となると期待される。

Report

(6 results)
  • 2022 Annual Research Report   Final Research Report ( PDF )
  • 2021 Annual Research Report
  • 2020 Annual Research Report
  • 2019 Annual Research Report
  • 2018 Annual Research Report
  • Research Products

    (15 results)

All 2023 2022 2021 2020 2019 2018 Other

All Int'l Joint Research (1 results) Journal Article (6 results) (of which Peer Reviewed: 6 results,  Open Access: 4 results) Presentation (7 results) (of which Int'l Joint Research: 1 results,  Invited: 1 results) Book (1 results)

  • [Int'l Joint Research] Indian Institute of Technology Kanpur(インド)

    • Related Report
      2019 Annual Research Report
  • [Journal Article] A leaderless mRNA including tRNA-like sequence encodes a small peptide that regulates the expression of GcvB small RNA in Escherichia coli2022

    • Author(s)
      Muto Akira、Goto Simon、Kurita Daisuke、Ushida Chisato、Soma Akiko、Himeno Hyota
    • Journal Title

      The Journal of Biochemistry

      Volume: 171 Issue: 4 Pages: 459-465

    • DOI

      10.1093/jb/mvac007

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Bacterial Ribosome Rescue Systems2022

    • Author(s)
      Daisuke Kurita, Hyota Himeno
    • Journal Title

      Microorganisms

      Volume: 10 Issue: 2 Pages: 372-372

    • DOI

      10.3390/microorganisms10020372

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Involvement of GcvB small RNA in intrinsic resistance to multiple aminoglycoside antibiotics in Escherichia coli.2021

    • Author(s)
      Akira Muto, Simon Goto, Daisuke Kurita, Chisato Ushida, Hyota Himeno
    • Journal Title

      Journal of Biochemistry

      Volume: 169 Issue: 4 Pages: 485-489

    • DOI

      10.1093/jb/mvaa122

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Identification of a short form of a Caenorhabditis elegans Y RNA homolog Cel7 RNA2021

    • Author(s)
      Takehiro Chiba, Shin-Ya Kihara, Manami Sato, Kou Xingkui, Simon Goto, Takuma Suzumura, Gota Kawai, Hyouta Himeno, Chisato Ushida
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 557 Pages: 104-109

    • DOI

      10.1016/j.bbrc.2021.03.143

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A stalled-ribosome rescue factor Pth3 is required for mitochondrial translation against antibiotics in Saccharomyces cerevisiae2021

    • Author(s)
      Hoshino Soichiro、Kanemura Ryohei、Kurita Daisuke、Soutome Yukihiro、Himeno Hyouta、Takaine Masak、Watanabe Masakatsu、Nameki Nobukazu
    • Journal Title

      Communications Biology

      Volume: 4 Issue: 1 Pages: 300-300

    • DOI

      10.1038/s42003-021-01835-6

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Molecular determinants of release factor 2 for ArfA-mediated ribosome rescue2020

    • Author(s)
      Kurita Daisuke、Abo Tatsuhiko、Himeno Hyouta
    • Journal Title

      Journal of Biological Chemistry

      Volume: 295 Issue: 38 Pages: 13326-13337

    • DOI

      10.1074/jbc.ra120.014664

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] cAMP causes growth arrest on E. coli under stress conditions2022

    • Author(s)
      Haque, M.F., Himeno, H
    • Organizer
      日本生化学会東北支部第88回例会・シンポジウム
    • Related Report
      2022 Annual Research Report
  • [Presentation] リボソーム小サブユニット生合成におけるYbeZの役割2022

    • Author(s)
      白山春斗、石井亮太、姫野俵太
    • Organizer
      第45回日本分子生物学会年会
    • Related Report
      2022 Annual Research Report
  • [Presentation] 翻訳停滞解消システムにおけるArfA/RF2/リボソーム複合体の構造解析2019

    • Author(s)
      栗田大輔・Ma C・Gao N・姫野俵太
    • Organizer
      第92回日本生化学会大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Structural basis of alternative ribosome rescue by ArfA and RF2.2019

    • Author(s)
      Kurita, D., Ma, C., Gao, N., Himeno, H.
    • Organizer
      24th Annual Meeting of the RNA Society
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Ribosome rescue systems in bacteriaRibosome rescue systems in bacteria2018

    • Author(s)
      Himeno, H., Muto, A., Kurita, D.
    • Organizer
      Phages, Virus, Bacteria & Hosts
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] クライオ電子顕微鏡によるリボソーム/ArfA/RF2翻訳停滞複合体の構造解析2018

    • Author(s)
      栗田大輔・Ma Chengying・Gao Ning・姫野俵太
    • Organizer
      日本農芸化学会 東北・北海道合同支部大会 第153回大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] クライオ電子顕微鏡によるリボソーム・ArfA・RF2複合体の構造解析2018

    • Author(s)
      栗田大輔・Ma Chengying・Gao Ning・姫野俵太
    • Organizer
      第5回リボソームミーティング
    • Related Report
      2018 Annual Research Report
  • [Book] mRNAの制御機構の解明と治療薬・ワクチンへの活用2023

    • Author(s)
      姫野俵太
    • Total Pages
      10
    • Publisher
      技術情報協会
    • ISBN
      9784861049378
    • Related Report
      2022 Annual Research Report

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Published: 2018-04-23   Modified: 2024-01-30  

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