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Sensitive microRNA detection on an original microfluidic chip

Research Project

Project/Area Number 18K04917
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Review Section Basic Section 28050:Nano/micro-systems-related
Research InstitutionInstitute of Physical and Chemical Research

Principal Investigator

Hosokawa Kazuo  国立研究開発法人理化学研究所, 開拓研究本部, 専任研究員 (00373366)

Project Period (FY) 2018-04-01 – 2023-03-31
Project Status Completed (Fiscal Year 2022)
Budget Amount *help
¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2020: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2019: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2018: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Keywordsマイクロ流体チップ / マイクロRNA
Outline of Final Research Achievements

MicroRNAs (miRNAs) are expected to be useful as a next-generation biomarker for early diagnosis of diseases including cancer. This study aimed at developing a rapid and sensitive detection method for miRNAs by utilizing the “power-free microfluidic chip”, which had been developed by our research group. We had already succeeded in detection of miRNAs in 20 min. Therefore, in this study, improvement of detection sensitivity was a major challenge. First, we have optimized the composition of the reaction buffer. The optimized reaction buffer was tested with 5 different miRNA sequences. As a result, the detection limits were improved 10- to 100-fold. Next, the optimized reaction buffer was applied to miRNA detection from a human sample. The amounts of 3 endogenous miRNAs, measured by the developed microfluidic chip, well agreed with those by conventional quantitative PCR.

Academic Significance and Societal Importance of the Research Achievements

マイクロRNA(miRNA)による遺伝子の発現制御は,細胞の分化・がん化・アポトーシスなど細胞活動の根幹に関わっており,これらの異常はがんやアルツハイマー病の発病・進行に直結するものである. miRNAはこれら疾病を早期診断するためのバイオマーカーとして期待されている.従来,miRNAの検出・定量には定量逆転写PCR,マイクロアレイなどが用いられてきたが,測定時間とコストに課題がある.本研究で得られたmiRNA測定法は従来法に比べて迅速・低コストであり,上記疾病の簡易診断の実現に近づいただけではなく,一般的な生物学研究にも有用なツールとなりうる.

Report

(6 results)
  • 2022 Annual Research Report   Final Research Report ( PDF )
  • 2021 Research-status Report
  • 2020 Research-status Report
  • 2019 Research-status Report
  • 2018 Research-status Report
  • Research Products

    (20 results)

All 2023 2022 2021 2020 2019 2018

All Journal Article (10 results) (of which Peer Reviewed: 10 results,  Open Access: 6 results) Presentation (10 results) (of which Int'l Joint Research: 3 results)

  • [Journal Article] Design of a Sensitive Extracellular Vesicle Detection Method Utilizing a Surface-Functionalized Power-Free Microchip2022

    • Author(s)
      Ishihara Ryo、Katagiri Asuka、Nakajima Tadaaki、Matsui Ryo、Hosokawa Kazuo、Maeda Mizuo、Tomooka Yasuhiro、Kikuchi Akihiko
    • Journal Title

      Membranes

      Volume: 12 Issue: 7 Pages: 679-679

    • DOI

      10.3390/membranes12070679

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Generation of transmitochondrial cybrids using a microfluidic device2022

    • Author(s)
      Wada Ken-Ichi、Hosokawa Kazuo、Ito Yoshihiro、Maeda Mizuo、Harada Yui、Yonemitsu Yoshikazu
    • Journal Title

      Experimental Cell Research

      Volume: 418 Issue: 1 Pages: 113233-113233

    • DOI

      10.1016/j.yexcr.2022.113233

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Multiplex MicroRNA Detection on a Surface-Functionalized Power-Free Microfluidic Chip2021

    • Author(s)
      ISHIHARA Ryo、KITANE Ryoichi、AKIYAMA Yoshitsugu、INOMATA Shoko、HOSOKAWA Kazuo、MAEDA Mizuo、KIKUCHI Akihiko
    • Journal Title

      Analytical Sciences

      Volume: 37 Issue: 5 Pages: 747-751

    • DOI

      10.2116/analsci.20SCP17

    • NAID

      130008036573

    • ISSN
      0910-6340, 1348-2246
    • Year and Date
      2021-05-10
    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Biomarker Analysis on a Power-free Microfluidic Chip Driven by Degassed Poly(dimethylsiloxane)2021

    • Author(s)
      HOSOKAWA Kazuo
    • Journal Title

      Analytical Sciences

      Volume: 37 Issue: 3 Pages: 399-406

    • DOI

      10.2116/analsci.20SCR04

    • NAID

      130007996249

    • ISSN
      0910-6340, 1348-2246
    • Year and Date
      2021-03-10
    • Related Report
      2020 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] A Microfluidic Device for Modulation of Organellar Heterogeneity in Live Single Cells2021

    • Author(s)
      WADA Ken-Ichi、HOSOKAWA Kazuo、ITO Yoshihiro、MAEDA Mizuo
    • Journal Title

      Analytical Sciences

      Volume: 37 Issue: 3 Pages: 499-505

    • DOI

      10.2116/analsci.20SCP11

    • NAID

      130007996244

    • ISSN
      0910-6340, 1348-2246
    • Year and Date
      2021-03-10
    • Related Report
      2020 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Fabrication of Storable Surface-Functionalized Power-Free Microfluidic Chip for Sensitive MicroRNA Detection Utilizing Ultraviolet Grafting2020

    • Author(s)
      Ishihara Ryo、Tanabe Kanta、Inomata Shoko、Matsui Ryo、Kitane Ryoichi、Hosokawa Kazuo、Maeda Mizuo、Kikuchi Akihiko
    • Journal Title

      Industrial & Engineering Chemistry Research

      Volume: 59 Issue: 22 Pages: 10464-10468

    • DOI

      10.1021/acs.iecr.0c00620

    • Related Report
      2020 Research-status Report
    • Peer Reviewed
  • [Journal Article] Sensitivity Enhancement of MicroRNA Detection Using a Power-free Microfluidic Chip2019

    • Author(s)
      KIM Young-Jin、HOSOKAWA Kazuo、MAEDA Mizuo
    • Journal Title

      Analytical Sciences

      Volume: 35 Issue: 11 Pages: 1227-1236

    • DOI

      10.2116/analsci.19P211

    • NAID

      130007743102

    • ISSN
      0910-6340, 1348-2246
    • Year and Date
      2019-11-10
    • Related Report
      2019 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Cytoplasmic fusion between an enlarged embryonic stem cell and a somatic cell using a microtunnel device2019

    • Author(s)
      Kim Seong Min、Wada Ken-Ichi、Ueki Masashi、Hosokawa Kazuo、Maeda Mizuo、Sakai Yasuyuki、Ito Yoshihiro
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 520 Issue: 2 Pages: 257-262

    • DOI

      10.1016/j.bbrc.2019.09.131

    • Related Report
      2019 Research-status Report
    • Peer Reviewed
  • [Journal Article] Characterizing the non-crosslinked aggregation of DNA-modified gold nanoparticles: effects of DNA length and terminal base pair2019

    • Author(s)
      Sato Kae、Hosokawa Kazuo、Maeda Mizuo
    • Journal Title

      The Analyst

      Volume: 144 Issue: 18 Pages: 5580-5588

    • DOI

      10.1039/c9an00822e

    • Related Report
      2019 Research-status Report
    • Peer Reviewed
  • [Journal Article] Design of a surface-functionalized power-free microchip for extracellular vesicle detection utilizing UV grafting2019

    • Author(s)
      Ishihara R.、Katagiri A.、Nakajima T.、Matsui R.、Komatsu S.、Hosokawa K.、Maeda M.、Tomooka Y.、Kikuchi A.
    • Journal Title

      Reactive and Functional Polymers

      Volume: 142 Pages: 183-188

    • DOI

      10.1016/j.reactfunctpolym.2019.06.017

    • Related Report
      2019 Research-status Report
    • Peer Reviewed
  • [Presentation] 独自のマイクロ流体チップを用いたデジタルPCR2023

    • Author(s)
      細川和生,大森整
    • Organizer
      日本化学会第103春季年会
    • Related Report
      2022 Annual Research Report
  • [Presentation] マイクロ流体デバイスを用いたミトコンドリアゲノム置換2021

    • Author(s)
      和田健一,細川和生,伊藤嘉浩,前田瑞夫
    • Organizer
      化学とマイクロ・ナノシステム学会第43回研究会
    • Related Report
      2021 Research-status Report
  • [Presentation] 自律駆動マイクロ流体チップを用いたマイクロRNAの高感度検出2020

    • Author(s)
      井上聖也,Young-Jin Kim,武政誠,細川和生,前田瑞夫
    • Organizer
      日本化学会第100春季年会
    • Related Report
      2019 Research-status Report
  • [Presentation] 自律駆動マイクロ流体チップを用いたマイクロRNA検出における検出限界の改善2019

    • Author(s)
      井上聖也,Young-Jin Kim, 武政誠,細川和生,前田瑞夫
    • Organizer
      日本分析化学会第68年会
    • Related Report
      2019 Research-status Report
  • [Presentation] MicroRNA detection on a power-free microfluidic chip2019

    • Author(s)
      Kazuo Hosokawa, Young-Jin Kim, Mizuo Maeda
    • Organizer
      第6回COINSシンポジウム
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research
  • [Presentation] Improved performance of a power-free microfluidic chip for a miRNA detection strategy2019

    • Author(s)
      Young-Jin Kim, Kazuo Hosokawa, Mizuo Maeda
    • Organizer
      6th International Conference on Multifunctional, Hybrid and Nanomaterials
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] A novel method for quantitative organelles transfer using a microfluidic device2019

    • Author(s)
      Ken-Ichi Wada, Kazuo Hosokawa, Yoshihiro Ito, Mizuo Maeda
    • Organizer
      3rd International Symposium on Nanoarchitectonics for Mechanobiology
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] マイクロデバイスを用いたオルガネラ移植の量的制御2018

    • Author(s)
      和田健一,細川和生,伊藤嘉浩,前田瑞夫
    • Organizer
      第28回日本MRS年次大会
    • Related Report
      2018 Research-status Report
  • [Presentation] シングルセル解析を目指したマイクロ流体デバイスを用いたオルガネラ組成の操作2018

    • Author(s)
      和田健一,細川和生,伊藤嘉浩,前田瑞夫
    • Organizer
      第41回日本分子生物学会年会
    • Related Report
      2018 Research-status Report
  • [Presentation] Quantitative control of mitochondria transfer between live single cells using a microfluidic device toward mtDNA editing2018

    • Author(s)
      和田健一,細川和生,伊藤嘉浩,前田瑞夫
    • Organizer
      第70回日本細胞生物学会
    • Related Report
      2018 Research-status Report

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Published: 2018-04-23   Modified: 2024-01-30  

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