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Development of quantitative SERS and their applications

Research Project

Project/Area Number 18K05354
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Review Section Basic Section 37030:Chemical biology-related
Research InstitutionKyoto Institute of Technology

Principal Investigator

Kobori Akio  京都工芸繊維大学, 分子化学系, 教授 (00397605)

Co-Investigator(Kenkyū-buntansha) 和久 友則  京都工芸繊維大学, 分子化学系, 准教授 (30548699)
Project Period (FY) 2018-04-01 – 2021-03-31
Project Status Completed (Fiscal Year 2020)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2020: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2019: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2018: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Keywords表面増強ラマン散乱 / DNA / RNA / ラマン散乱 / SERS / 核酸 / イメージング / バイオマーカー
Outline of Final Research Achievements

Quantification of trace amounts of nucleic acids in bio-samples is a promising way for diagnosis of virus-induced diseases. Although qPCR is the gold standard for quantification of nucleic acids, development of facile and accurate methods for diagnosis are quite important. One of the answers are the methods using surface-enhanced Raman scattering, SERS. Sensitivity of SERS is dramatically increased over the last two decades and almost outstripped that of fluorescent measurements. However significant improvements for reproducibility of SERS measurements have been required from a practical application. In this study, we newly designed a ratiometric SERS-based assay of nucleic acids. This assay uses two Raman tags as an internal standard and Raman reporter. By this method, sub-nanomolar of the target DNAs were automatically detected with small standard deviations.

Academic Significance and Societal Importance of the Research Achievements

サイレント領域にラマンシグナルを発するラマンタグを2つ導入したSERSプローブを利開発したことで、簡便かつ高感度な核酸測定系の実現に成功した。本手法における核酸検出感度は、蛍光タグを利用した従来の核酸測定法と同程度であることを示すことに成功している。また、ラマン顕微鏡を利用したマッピング測定にSERS測定系を融合可能であることも実験から証明しているため、ラマン分光測定の新たな可能性を示す結果として大いに評価できる。

Report

(4 results)
  • 2020 Annual Research Report   Final Research Report ( PDF )
  • 2019 Research-status Report
  • 2018 Research-status Report
  • Research Products

    (11 results)

All 2021 2019 2018

All Journal Article (4 results) (of which Peer Reviewed: 4 results,  Open Access: 1 results) Presentation (7 results) (of which Int'l Joint Research: 3 results)

  • [Journal Article] Ratiometric SERS Assays for Reliable and Automatic Quantification of Nucleic Acids2021

    • Author(s)
      Ota Ryo、Fukushima Yuki、Araki Yuta、Sasaki Kenta、Waku Tomonori、Kobori Akio
    • Journal Title

      Chemistry Letters

      Volume: 50 Issue: 3 Pages: 513-517

    • DOI

      10.1246/cl.200798

    • NAID

      130007995508

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Sandwich-typed detection of nucleic acids by bioorthogonal SERS probes2021

    • Author(s)
      R. Ota, N. Takagi, Y. Imaizumi, T. Waku, A. Kobori
    • Journal Title

      Nucleosides Nucleotides Nucleic Acids

      Volume: 40 Pages: 166-177

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Selective cross-linking behavior of oligodeoxyribonucleotides containing 2'-O-[N-(4,5',8-trimethylpsoralen-4'- ylmethylcarbamoyl)]adenosine to mutant H-ras DNA2019

    • Author(s)
      A.Yamayoshi, M.Higuchi, Y.Sakai, A.Kobori, T.Yamamoto, T. Shibata, A. Murakami
    • Journal Title

      NUCLEOSIDES, NUCLEOTIDES AND NUCLEIC ACIDS

      Volume: 39 Issue: 1-3 Pages: 119-130

    • DOI

      10.1080/15257770.2019.1677912

    • Related Report
      2019 Research-status Report
    • Peer Reviewed
  • [Journal Article] Photochromic DNA having fluorescent protein-inspired nucleosides2018

    • Author(s)
      Akio Kobori, Taichiro Arai, Yuya Sakata, Takayuki Sugita, Asako Yamayoshi, Akira Murakami
    • Journal Title

      Tetrahedron Letters

      Volume: 59 Issue: 41 Pages: 3690-3693

    • DOI

      10.1016/j.tetlet.2018.08.064

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] Development of SERS-active nanoparticles for sensitive detection of nucleic acids2019

    • Author(s)
      太田良
    • Organizer
      ISNAC2019
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research
  • [Presentation] ステムループ型SERSプローブを利用したmiRNA定量法の開発2019

    • Author(s)
      太田良
    • Organizer
      2019年度日本分光学会年次講演会
    • Related Report
      2019 Research-status Report
  • [Presentation] 高感度核酸検出を志向した生体直行型SERSプローブの開発2018

    • Author(s)
      太田 良
    • Organizer
      第28回バイオ・高分子シンポジウム
    • Related Report
      2018 Research-status Report
  • [Presentation] Development of a sandwich-typed assay for nucleic acids using surface-enhanced Raman scattering2018

    • Author(s)
      Ryo Ota, Akio Kobori
    • Organizer
      256th ACS national meeting
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] PEG-核酸複合体を導入した金ナノロッドの調製と機能評価2018

    • Author(s)
      福島雄基、太田良、小堀哲生
    • Organizer
      日本バイオマテリアル学会第13回関西若手研究発表会
    • Related Report
      2018 Research-status Report
  • [Presentation] 生体直行型ラマンタグを鎖中に導入した核酸の合成と機能評価2018

    • Author(s)
      太田良、福島雄基、小堀哲生
    • Organizer
      第12回バイオ関連化学合同シンポジウム
    • Related Report
      2018 Research-status Report
  • [Presentation] Facile quantification of miRNAs in biological samples2018

    • Author(s)
      Kizuki Ichimi, Yu Watari, Akio Kobori
    • Organizer
      2018ISNAC
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research

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Published: 2018-04-23   Modified: 2022-01-27  

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