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Development of the inhibitors to RNA demethylases and it's application to monitor local demethylation

Research Project

Project/Area Number 18K05435
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Review Section Basic Section 38030:Applied biochemistry-related
Research InstitutionKyoto University

Principal Investigator

Fujiwara Yoshie  京都大学, 高等研究院, 研究員 (90423095)

Project Period (FY) 2018-04-01 – 2021-03-31
Project Status Completed (Fiscal Year 2020)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2020: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2019: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2018: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
KeywordsRNAの脱メチル化 / 阻害剤 / 細胞膜透過性 / RNA脱メチル化
Outline of Final Research Achievements

RNA modification is one of the translational regulation mechanisms which allow cells to respond quickly to stimulations from environment. To study if activity dependent demethylation of reversible m6A modification on mRNAs occurs during local translation at synapse, we planned to obtain the demethylase inhibitor with high cell permiability. We developed FTO inhibitor based on a known compound, and confirmed that it works in cells. On the other hand, we found several compounds which show inhibitory activity by screening, but now, their specificity to two demethylases, FTO and ALKBH5, belonging to the same superfamily is low. Docking simulation suggested key amino acids for further improvement of the inhibitor. At the same time, we prepared FTO-KO and ALKBH5-KO cell lines. Further research is required to examine local demethylation. The FTO inhibitor we developed can be used for the examination of local demethylation in future.

Academic Significance and Societal Importance of the Research Achievements

RNA修飾は細胞機能の発現と関係し、パターンやバランスが崩れると、疾患の原因になることもある。本研究で開発したFTO特異的阻害剤は、神経細胞のみならず、各種細胞へ利用が可能である。

Report

(4 results)
  • 2020 Annual Research Report   Final Research Report ( PDF )
  • 2019 Research-status Report
  • 2018 Research-status Report
  • Research Products

    (3 results)

All 2020 2019

All Journal Article (1 results) (of which Open Access: 1 results) Presentation (2 results)

  • [Journal Article] Schizophrenia and autism associated mutations and disrupted m6A signal by YTHDF1 cause defects in microtubule function and neurodevelopment2020

    • Author(s)
      Roy Rohini、Li Xiangru、Hou Shengqun、Fujiwara Yoshie、Sukegawa Momoe、Hong Wan-Ting、Oomoto Ikumi、Ito Hidenori、Joshi Kandarp、Fan Ruolin、Nagata Koh-ichi、Lai Kwok-on、Wang Dan Ohtan
    • Journal Title

      bioRxiv

      Volume: -

    • DOI

      10.1101/2020.11.14.382556

    • Related Report
      2020 Annual Research Report
    • Open Access
  • [Presentation] m6A readers are required for neuronal development and connections in vitro2020

    • Author(s)
      Dan Ohtan Wang, Rohini Roy, Hiroki Umeshima, Ikumi Oomoto, Ruolin Fan, Momoe Sukegawa, Yoshie Fujiwara, Kwok-On Lai, Xiangru Li
    • Organizer
      第43回日本神経科学大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] Screening and identification of inhibitor candidates against <I>N6</I>-methyladenosine demethylase ALKBH52019

    • Author(s)
      Yoshie Fujiwara, Yume Kato, Kanako Hori, Yohei Katoh, Kazuhisa Nakayama, Tatsuya Takagi, Yushi Tian, Dan Ohtan Wang
    • Organizer
      第42回日本神経科学大会
    • Related Report
      2019 Research-status Report

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Published: 2018-04-23   Modified: 2022-01-27  

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