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Gross chromosomal rearrangements using DNA repeats

Research Project

Project/Area Number 18K06060
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Review Section Basic Section 43010:Molecular biology-related
Research InstitutionOsaka University

Principal Investigator

Nakagawa Takuro  大阪大学, 理学研究科, 准教授 (20324866)

Project Period (FY) 2018-04-01 – 2022-03-31
Project Status Completed (Fiscal Year 2021)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2020: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2019: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2018: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Keywords染色体異常 / セントロメア / 反復配列 / 相同組換え / DNA複製 / 分裂酵母 / 同腕染色体 / ヘテロクロマチン / DNA反復配列 / がん / 転写 / RNAポリメラーゼII
Outline of Final Research Achievements

There are lots of repetitive sequences in the eukaryote genome, which can mediate gross chromosomal rearrangement (GCR) such as translocation. GCR can cause genetic diseases including cancer. (1) The homologous recombination enzyme, Rad51, promotes faithful repair of DNA damage. On the other hand, we found that another recombination protein, Rad52, facilitates GCR mediated by DNA repeats. (2) High-order chromatin structure, heterochromatin, inhibits transcription of DNA repeats at the centromere region of chromosomes while the centromere repeats do not encode any protein. We found that heterochromatin suppresses GCR through the inhibition of centromere repeat transcription.

Academic Significance and Societal Importance of the Research Achievements

(1)Rad51とRad52は共にDNA組換えを促進するが、それらの間の違いは不明でした。しかし、本研究により、Rad51は染色体維持に働く一方、Rad52は染色体異常を引き起こすことが明らかになりました。(2)染色体のセントロメア反復配列はタンパク質をコードしないにも関わらず、ヘテロクロマチン構造により積極的に転写が抑制されています。本研究により、セントロメアの転写抑制は染色体異常を防ぐために重要であることが明らかになりました。これらの知見は、癌などの遺伝性疾患の予防や治療法の開発に資すると期待されます。

Report

(5 results)
  • 2021 Annual Research Report   Final Research Report ( PDF )
  • 2020 Research-status Report
  • 2019 Research-status Report
  • 2018 Research-status Report
  • Research Products

    (29 results)

All 2022 2021 2020 2019 2018 Other

All Journal Article (6 results) (of which Peer Reviewed: 6 results,  Open Access: 5 results) Presentation (17 results) (of which Int'l Joint Research: 4 results,  Invited: 3 results) Remarks (6 results)

  • [Journal Article] Fission yeast Rad8/HLTF facilitates Rad52-dependent chromosomal rearrangements through PCNA lysine 107 ubiquitination2021

    • Author(s)
      Su Jie、Xu Ran、Mongia Piyusha、Toyofuku Naoko、Nakagawa Takuro
    • Journal Title

      PLOS Genetics

      Volume: 17 Issue: 7 Pages: e1009671-e1009671

    • DOI

      10.1371/journal.pgen.1009671

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] DNA replication machinery prevents Rad52-dependent single-strand annealing that leads to gross chromosomal rearrangements at centromeres2020

    • Author(s)
      Onaka Atsushi T.、Su Jie、Katahira Yasuhiro、Tang Crystal、Zafar Faria、Aoki Keita、Kagawa Wataru、Niki Hironori、Iwasaki Hiroshi、Nakagawa Takuro
    • Journal Title

      Communications Biology

      Volume: 3 Issue: 1 Pages: 202-202

    • DOI

      10.1038/s42003-020-0934-0

    • NAID

      120007117441

    • Related Report
      2020 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Transcriptional silencing of centromere repeats by heterochromatin safeguards chromosome integrity.2019

    • Author(s)
      Nakagawa Takuro, Okita Akiko K
    • Journal Title

      Current Genetics

      Volume: 65 Issue: 5 Pages: 1089-1098

    • DOI

      10.1007/s00294-019-00975-x

    • Related Report
      2019 Research-status Report
    • Peer Reviewed
  • [Journal Article] Heterochromatin suppresses gross chromosomal rearrangements at centromeres by repressing Tfs1/TFIIS-dependent transcription2019

    • Author(s)
      Okita Akiko K.、Zafar Faria、Su Jie、Weerasekara Dayalini、Kajitani Takuya、Takahashi Tatsuro S.、Kimura Hiroshi、Murakami Yota、Masukata Hisao、Nakagawa Takuro
    • Journal Title

      Communications Biology

      Volume: 2 Issue: 1 Pages: 17-17

    • DOI

      10.1038/s42003-018-0251-z

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Shelterin promotes tethering of late replication origins to telomeres for replication‐timing control2018

    • Author(s)
      Ogawa Shiho、Kido Sayuri、Handa Tetsuya、Ogawa Hidesato、Asakawa Haruhiko、Takahashi Tatsuro S、Nakagawa Takuro、Hiraoka Yasushi、Masukata Hisao
    • Journal Title

      The EMBO Journal

      Volume: 37 Issue: 15 Pages: 15-15

    • DOI

      10.15252/embj.201898997

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Nucleosomes around a mismatched base pair are excluded via an Msh2-dependent reaction with the aid of SNF2 family ATPase Smarcad1.2018

    • Author(s)
      Terui R, Nagao K, Kawasoe Y, Taki K, Higashi TL, Tanaka S, Nakagawa T, Obuse C, Masukata H, Takahashi TS
    • Journal Title

      Genes & development

      Volume: 32(11-12) Issue: 11-12 Pages: 806-821

    • DOI

      10.1101/gad.310995.117

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] Heterochromatin suppresses gross chromosomal rearrangements at centromeres.2022

    • Author(s)
      Takuro Nakagawa
    • Organizer
      National Tsing Hua University-Osaka University (NTHU-OU) virtual symposium on biological and medical sciences
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 染色体異常の分子メカニズム(日本遺伝学会奨励賞受賞講演)2021

    • Author(s)
      中川拓郎
    • Organizer
      日本遺伝学会(第93回大会)
    • Related Report
      2021 Annual Research Report
    • Invited
  • [Presentation] Heterochromatin prevents DNA-RNA hybrid formation that causes gross chromosomal rearrangements at centromeres.2021

    • Author(s)
      Ran Xu, Crystal Tang, Takuro Nakagawa
    • Organizer
      日本分子生物学会(第44回年会)
    • Related Report
      2021 Annual Research Report
  • [Presentation] Ber1 and Skb1 cause gross chromosomal rearrangements at centromeres in rad51 deletion cells.2021

    • Author(s)
      Piyusha Mongia, Naoko Toyofuku, Takuro Nakagawa
    • Organizer
      日本分子生物学会(第44回年会)
    • Related Report
      2021 Annual Research Report
  • [Presentation] Rad8-dependent PCNA ubiquitination at lysine 107 promotes gross chromosomal rearrangements.2021

    • Author(s)
      Jie Su and Takuro Nakagawa
    • Organizer
      pombe Talks
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 分裂酵母PCNAのユビキチン化による染色体異常の促進2020

    • Author(s)
      中川拓郎、豊福直子、蘇傑
    • Organizer
      日本遺伝学会
    • Related Report
      2020 Research-status Report
  • [Presentation] 染色体異常の分子メカニズム2020

    • Author(s)
      蘇傑、豊福直子、中川拓郎
    • Organizer
      日本分子生物学会
    • Related Report
      2020 Research-status Report
    • Invited
  • [Presentation] R ループは分裂酵母のセントロメア領域での染色体異常を引き起こす2019

    • Author(s)
      Tang Crystal、中川拓郎
    • Organizer
      第37回 染色体ワークショップ・第18回 核ダイナミクス研究会
    • Related Report
      2019 Research-status Report
  • [Presentation] 分裂酵母Rad8はPCNA K107のユビキチン化を介してセントロメア領域での染色体異常を引き起こす2019

    • Author(s)
      中川拓郎、豊福直子、蘇傑
    • Organizer
      第37回 染色体ワークショップ・第18回 核ダイナミクス研究会
    • Related Report
      2019 Research-status Report
  • [Presentation] 分裂酵母Rad8/Rad5/HLTFによる染色体異常の分子機構2019

    • Author(s)
      中川拓郎、豊福直子、沖慶太郎、蘇傑
    • Organizer
      第25回 DNA複製・組換え・修復ワークショップ
    • Related Report
      2019 Research-status Report
  • [Presentation] ヘテロクロマチンによる染色体異常の抑制2019

    • Author(s)
      中川拓郎
    • Organizer
      染色体ワークショップ・核ダイナミクス研究会
    • Related Report
      2018 Research-status Report
  • [Presentation] 分裂酵母を用いた染色体異常の分子機構の解明2019

    • Author(s)
      中川拓郎
    • Organizer
      国立遺伝学研究所 研究集会
    • Related Report
      2018 Research-status Report
    • Invited
  • [Presentation] Heterochromatin suppresses Gross Chromosomal Rearrangements at Centromeres2019

    • Author(s)
      中川拓郎
    • Organizer
      武田科学振興財団 生命科学シンポジウム
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] 分裂酵母を用いた染色体異常の分子メカニズムの研究2019

    • Author(s)
      中川拓郎
    • Organizer
      大阪大学 理学研究フォーラム
    • Related Report
      2018 Research-status Report
  • [Presentation] ヘテロクロマチンによる染色体異常の抑制2018

    • Author(s)
      中川拓郎
    • Organizer
      日本遺伝学会
    • Related Report
      2018 Research-status Report
  • [Presentation] Heterochromatin suppresses gross chromosomal rearrangements at centromeres2018

    • Author(s)
      中川拓郎
    • Organizer
      3R Symposium
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] ヘテロクロマチンによる転写制御を介した染色体異常の抑制機構2018

    • Author(s)
      中川拓郎
    • Organizer
      日本分子生物学会
    • Related Report
      2018 Research-status Report
  • [Remarks] Laboratory of Molecular Genetics

    • URL

      https://www.bio.sci.osaka-u.ac.jp/~takuro/science/

    • Related Report
      2021 Annual Research Report
  • [Remarks] Laboratory of Molecular Genetics

    • URL

      http://www.bio.sci.osaka-u.ac.jp/~takuro/science/

    • Related Report
      2020 Research-status Report
  • [Remarks] 学際グループ(分子遺伝学)

    • URL

      http://www.bio.sci.osaka-u.ac.jp/dbs01/re-paper-temp.php?id=14

    • Related Report
      2020 Research-status Report 2019 Research-status Report
  • [Remarks] 研究室ホームページ

    • URL

      http://www.bio.sci.osaka-u.ac.jp/~takuro/science/

    • Related Report
      2019 Research-status Report
  • [Remarks] 大阪大学大学院:理学研究科生物科学専攻:研究室紹介:詳細

    • URL

      https://www.bio.sci.osaka-u.ac.jp/dbs01/re-paper-temp.php?id=14

    • Related Report
      2018 Research-status Report
  • [Remarks] Home | Takuro Nakagawa Group Web Site

    • URL

      http://www.bio.sci.osaka-u.ac.jp/~takuro/science/

    • Related Report
      2018 Research-status Report

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Published: 2018-04-23   Modified: 2023-01-30  

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