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The detection and formation mechanism of guanine quadruplex DNA structure in the cell

Research Project

Project/Area Number 18K06072
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Review Section Basic Section 43010:Molecular biology-related
Research InstitutionTokyo Metropolitan Institute of Medical Science

Principal Investigator

KANOH Yutaka  公益財団法人東京都医学総合研究所, 基礎医科学研究分野, 主席研究員 (90450593)

Project Period (FY) 2018-04-01 – 2021-03-31
Project Status Completed (Fiscal Year 2020)
Budget Amount *help
¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2020: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2019: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2018: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Keywordsグアニン4重鎖DNA / 非B型DNA / 研究法開発 / 染色体機能 / guanine quadruplex / Rif1 / in vivo / G-quadruplex / I-SceI / DNA replication / 染色体機能制御
Outline of Final Research Achievements

DNA is an information device composed of four nucleotides. Many chromosome regulations are regulated to maintain biological information and must be adjusted at the appropriate timing and intensity. In addition to the known chromosome regulation mechanisms, Guanine Quadruplex (G4) DNA included in non-B-type DNA structures have been found to be involved in repression of transcription, activation of DNA replication, telomere regulation, etc. Although in vitro analysis of G4 DNA is improving well, the elucidation of chromosome regulation by G4DNA in the cell is important academically. In this study, we have established a new detection method of G4DNA for intracellular analysis. In addition, we identified the feature of G4DNA on the chromosome is an open nucleosome.

Academic Significance and Societal Importance of the Research Achievements

これまで染色体制御は、DNAの1次配列・ヒストン修飾・DNA修飾等による研究が行われてきた。近年これに加えG4DNAをはじめとした非B型DNA構造が染色体の制御に関与していることが判明してきている。しかし、非B型DNA構造の研究は試験管内の再構築がメインに行われてきたため、細胞内でどのような事象に関与しているか、未だ不明な面が多い。そこで我々が確立した方法等を用いることにより非B型DNA構造の機能的な解明が進めば、より生命現象の理解に寄与できる。ひいては染色体の正常化維持の理解につながり、癌研究やその治療などへの社会に貢献できる意義がある。

Report

(4 results)
  • 2020 Annual Research Report   Final Research Report ( PDF )
  • 2019 Research-status Report
  • 2018 Research-status Report
  • Research Products

    (10 results)

All 2020 2019 2018 Other

All Journal Article (4 results) (of which Peer Reviewed: 4 results,  Open Access: 4 results) Presentation (5 results) (of which Int'l Joint Research: 2 results) Remarks (1 results)

  • [Journal Article] Detection of cellular G-quadruplex by using a loop structure as a structural determinant2020

    • Author(s)
      Masai Hisao、Kanoh Yutaka、Kakusho Naoko、Fukatsu Rino
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 531 Issue: 1 Pages: 75-83

    • DOI

      10.1016/j.bbrc.2020.05.191

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Rif1 promotes association of G-quadruplex (G4) by its specific G4 binding and oligomerization activities2019

    • Author(s)
      Masai Hisao、Fukatsu Rino、Kakusho Naoko、Kanoh Yutaka、Moriyama Kenji、Ma Yue、Iida Keisuke、Nagasawa Kazuo
    • Journal Title

      Scientific Reports

      Volume: 9 Issue: 1 Pages: 8618-8618

    • DOI

      10.1038/s41598-019-44736-9

    • Related Report
      2019 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Both a Unique Motif at the C Terminus and an N-Terminal HEAT Repeat Contribute to G-Quadruplex Binding and Origin Regulation by the Rif1 Protein2018

    • Author(s)
      Kobayashi Shunsuke、Fukatsu Rino、Kanoh Yutaka、Kakusho Naoko、Matsumoto Seiji、Chaen Shigeru、Masai Hisao
    • Journal Title

      Molecular and Cellular Biology

      Volume: 39 Issue: 4

    • DOI

      10.1128/mcb.00364-18

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Molecular architecture of G-quadruplex structures generated on duplex Rif1-binding sequences2018

    • Author(s)
      Masai Hisao、Kakusho Naoko、Fukatsu Rino、Ma Yue、Iida Keisuke、Kanoh Yutaka、Nagasawa Kazuo
    • Journal Title

      Journal of Biological Chemistry

      Volume: 293 Issue: 44 Pages: 17033-17049

    • DOI

      10.1074/jbc.ra118.005240

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] 分裂酵母のRif1の過剰発現は増殖を阻害し、M期の進行を妨害することで細胞死を誘導する。2020

    • Author(s)
      加納豊 松本清治 正井久雄
    • Organizer
      第43回日本分子生物学会年会
    • Related Report
      2020 Annual Research Report
  • [Presentation] Rif1の結合サイトから読み解くグアニン4重鎖構造の染色体上での形成メカニズムの解明2019

    • Author(s)
      加納 豊・松本 清治・高沢 佳芳・小林 駿介・關口 直樹・深津 理乃・覚正 直子・正井久雄
    • Organizer
      MBSJ2019
    • Related Report
      2019 Research-status Report
  • [Presentation] Genetic analysis of Rif1 protein and G-quadruplexes in the fission yeast2019

    • Author(s)
      Yutaka Kanoh, Shunsuke Kobayashi, Rino Fukatsu, Naoko Kakusho, Seiji Matsumoto, Kaho Takasawa, Hisao Masai
    • Organizer
      EMBO Workshop on Fission Yeast 10th International Meeting
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research
  • [Presentation] DNA複製を制御するグアニン4重鎖構造の細胞内存在と形成のメカニズムの解明2018

    • Author(s)
      加納 豊・松本 清治・關口直樹・深津 理乃・覚正 直子・正井久雄
    • Organizer
      第41回日本分子生物学会年会
    • Related Report
      2018 Research-status Report
  • [Presentation] Fission yeast Rif1 functional analysis in DNA replication2018

    • Author(s)
      Yutaka Kanoh, Seiji Matsumoto, Hisao Masai
    • Organizer
      3R-3C
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Remarks] 公益財団法人 東京都医学総合研究所 基礎医科学研究分野 ゲノム動態プロジェクト ホームページ

    • URL

      http://www.igakuken.or.jp/project/detail/genome.html

    • Related Report
      2019 Research-status Report

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Published: 2018-04-23   Modified: 2022-01-27  

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