• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Mechanisms underlying unusual DNA synthesis during the moss reprogramming

Research Project

Project/Area Number 18K06302
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Review Section Basic Section 44030:Plant molecular biology and physiology-related
Research InstitutionNational Institute for Basic Biology

Principal Investigator

Ishikawa Masaki  基礎生物学研究所, 生物進化研究部門, 助教 (00586894)

Project Period (FY) 2018-04-01 – 2022-03-31
Project Status Completed (Fiscal Year 2021)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2020: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2019: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2018: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywordsヒメツリガネゴケ / 幹細胞化 / 細胞周期 / DNA合成 / 幹細胞 / 細胞運命転換
Outline of Final Research Achievements

In the moss Physcomitrium patens, upon wounding, leaf cells reactivate the cell cycle and change into stem cells. In this process, the cell cycle-dependent DNA synthesis (unusual DNA synthesis), which is different from the usual nuclear genome DNA replication, is required for the cell fate change. In this study, we aimed to elucidate the regulatory mechanism of the unusual DNA synthesis during stem cell formation in order to understand the relationship between the cell cycle reentry/progression and the cell fate change. Our results suggest that genomic DNA damage occurs during stem cell formation, which leads to the activation of the DNA repair system related to the novel DNA synthesis. We also found that the DNA repair system, which is activated by genomic DNA damage, is involved in stem cell formation. These results suggest that the DNA repair system may be involved in the demethylation of genomic DNA and these processes may be the novel DNA synthesis during stem cell formation.

Academic Significance and Societal Importance of the Research Achievements

ヒメツリガネゴケの幹細胞化における細胞周期制御下にある新奇DNA合成が細胞運命転換を誘導するというアイデアは、「細胞周期における各ステージの役割は、ただ単に細胞周期を動かすためだけなのか」、という細胞周期制御についての根源的な問いに立ち返ることになり、本研究から得られた成果は、動植物の枠を超えた新たな細胞周期研究の展開に繋がる可能性を秘めており、その学術的意義は大きい。

Report

(5 results)
  • 2021 Annual Research Report   Final Research Report ( PDF )
  • 2020 Research-status Report
  • 2019 Research-status Report
  • 2018 Research-status Report
  • Research Products

    (35 results)

All 2022 2021 2020 2019 2018 Other

All Int'l Joint Research (3 results) Journal Article (9 results) (of which Int'l Joint Research: 4 results,  Peer Reviewed: 7 results,  Open Access: 8 results) Presentation (21 results) (of which Int'l Joint Research: 6 results,  Invited: 12 results) Remarks (2 results)

  • [Int'l Joint Research] Huazhong Agricultural Univ.(中国)

    • Related Report
      2021 Annual Research Report
  • [Int'l Joint Research] Acad. Sci. of Czech Republic(チェコ)

    • Related Report
      2021 Annual Research Report
  • [Int'l Joint Research] Univ. of Copenhagen(デンマーク)

    • Related Report
      2021 Annual Research Report
  • [Journal Article] A PSTAIRE-type cyclin-dependent kinase controls light responses in land plants2022

    • Author(s)
      Bao Liang、Inoue Natsumi、Ishikawa Masaki、Gotoh Eiji、Teh Ooi-Kock、Higa Takeshi、Morimoto Tomoro、Ginanjar Eggie Febrianto、Harashima Hirofumi、Noda Natsumi、Watahiki Masaaki、Hiwatashi Yuji、Sekine Masami、Hasebe Mitsuyasu、Wada Masamitsu、Fujita Tomomichi
    • Journal Title

      Science Advances

      Volume: 8 Issue: 4 Pages: 1-12

    • DOI

      10.1126/sciadv.abk2116

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Molecular mechanisms of reprogramming of differentiated cells into stem cells in the moss Physcomitrium patens2022

    • Author(s)
      Ishikawa Masaki、Hasebe Mitsuyasu
    • Journal Title

      Current Opinion in Plant Biology

      Volume: 65 Pages: 1-7

    • DOI

      10.1016/j.pbi.2021.102123

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Overexpression of ATG8/LC3 enhances wound-induced somatic reprogramming in Physcomitrium patens2021

    • Author(s)
      Kanne Jakob V.、Ishikawa Masaki、Bressendorff Simon、Ansbol Jeppe、Hasebe Mitsuyasu、Rodriguez Eleazar、Petersen Morten
    • Journal Title

      Autophagy

      Volume: Online ahead of print Issue: 6 Pages: 1-4

    • DOI

      10.1080/15548627.2021.1975913

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Plant stem cell research is uncovering the secrets of longevity and persistent growth2021

    • Author(s)
      Umeda Masaaki、Ikeuchi Momoko、Ishikawa Masaki、Ito Toshiro、Nishihama Ryuichi、Kyozuka Junko、Torii Keiko U.、Satake Akiko、Goshima Gohta、Sakakibara Hitoshi
    • Journal Title

      The Plant Journal

      Volume: Online ahead of print Issue: 2 Pages: 1-10

    • DOI

      10.1111/tpj.15184

    • Related Report
      2020 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] DNA damage triggers reprogramming of differentiated cells into stem cells in Physcomitrella2020

    • Author(s)
      Gu Nan、Tamada Yosuke、Imai Akihiro、Palfalvi Gergo、Kabeya Yukiko、Shigenobu Shuji、Ishikawa Masaki、Angelis Karel J.、Chen Chunli、Hasebe Mitsuyasu
    • Journal Title

      Nature Plants

      Volume: 6 Issue: 9 Pages: 1098-1105

    • DOI

      10.1038/s41477-020-0745-9

    • Related Report
      2020 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] クロマチン修飾を介して植物の分化細胞を幹細胞化する新規転写因子STEMIN2020

    • Author(s)
      石川 雅樹
    • Journal Title

      バイオサイエンスとインダストリー

      Volume: 3 Pages: 240-241

    • Related Report
      2020 Research-status Report
  • [Journal Article] Physcomitrella STEMIN transcription factor induces stem cell formation with epigenetic reprogramming2019

    • Author(s)
      Masaki Ishikawa, Mio Morishita, Yohei Higuchi, Shunsuke Ichikawa, Takaaki Ishikawa, Tomoaki Nishiyama, Yukiko Kabeya, Yukiko, Yuji Hiwatashi, Tetsuya Kurata, Minoru Kubo, Shuji Shigenobu, Yosuke Tamada, Sato Yoshikatsu, Mitsuyasu Hasebe
    • Journal Title

      Nature Plants

      Volume: 5 Issue: 7 Pages: 681-690

    • DOI

      10.1038/s41477-019-0464-2

    • Related Report
      2019 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Single-cell transcriptome analysis of Physcomitrella leaf cells during reprogramming using microcapillary manipulation2019

    • Author(s)
      Minoru Kubo, Tomoaki Nishiyama, Yosuke Tamada, Ryosuke Sano, Masaki Ishikawa, Takashi Murata, Akihiro Imai, Daniel Lang, Taku Demura, Ralf Reski, Mitsuyasu Hasebe
    • Journal Title

      Nucleic Acid Research

      Volume: in press Issue: 9 Pages: 4539-4553

    • DOI

      10.1093/nar/gkz181

    • Related Report
      2019 Research-status Report 2018 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] 植物がもつ再生能力の秘密 -分化細胞を幹細胞へと変化させる"ステミン遺伝子"の発見2019

    • Author(s)
      石川雅樹
    • Journal Title

      academist Journal

      Volume: -

    • Related Report
      2019 Research-status Report
    • Open Access
  • [Presentation] Cellular reprogramming into stem cells as an adaptation to land environments in Physcomitrium patens2022

    • Author(s)
      Masaki Ishikawa and Mitsuyasu Hasebe
    • Organizer
      PLANT & ANIMAL GENOME XXIX
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Mechanisms underlying stem cell formation in the moss Physcomitrium patens2021

    • Author(s)
      Masaki Ishikawa
    • Organizer
      Secrets of stem cells underlying longevity and persistent growth
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 陸上植物の幹細胞新生を制御する分子機構2021

    • Author(s)
      石川 雅樹
    • Organizer
      第14回 日本エピジェネティクス研究会年会
    • Related Report
      2020 Research-status Report
    • Invited
  • [Presentation] 遺伝子組換えヒメツリガネゴケの拡散防止措置2020

    • Author(s)
      石川 雅樹、畠山 晋、西浜 竜一、坂本 裕一、須賀 晴久、鈴木 智大、矢野 明、西内 巧
    • Organizer
      第43回 日本分子生物学会年会
    • Related Report
      2020 Research-status Report
  • [Presentation] 器官再生の鍵を握るエピゲノムの再構築2020

    • Author(s)
      石川雅樹、青山剛士、長谷部光泰
    • Organizer
      日本植物学会 第84回大会
    • Related Report
      2020 Research-status Report
    • Invited
  • [Presentation] 遺伝子組換えキノコ類の拡散防止措置2020

    • Author(s)
      鈴木 智大、矢野 明、坂本 裕一、畠山 晋、石川 雅樹、西浜 竜一、須賀 晴久、西内 巧
    • Organizer
      第43回 日本分子生物学会年会
    • Related Report
      2020 Research-status Report
  • [Presentation] 組換えアカパンカビの拡散防止措置2020

    • Author(s)
      畠山 晋、鈴木 智大、矢野 明、坂本 裕一、石川 雅樹、西浜 竜一、須賀 晴久、西内 巧
    • Organizer
      第43回 日本分子生物学会年会
    • Related Report
      2020 Research-status Report
  • [Presentation] ヒメツリガネゴケの茎葉体における細胞分裂軸制御機構の解析2020

    • Author(s)
      幸節 健、堀内 雄太、玉田 洋介、石川 雅樹、壁谷 幸子、小藤 累美子、長谷部 光泰
    • Organizer
      日本植物学会 第84回大会
    • Related Report
      2020 Research-status Report
  • [Presentation] GRAS 転写因子によるヒ メツリガネゴケ葉原基の 細胞分裂軸制御2020

    • Author(s)
      堀内 雄太、藤原 彩香、藤本 直也、中村亮、吉田 彩子、幸節 健、壁谷 幸子、石川 雅樹、玉田 洋介、藤本 仰一、長谷部 光泰、小藤 累美子
    • Organizer
      日本植物学会 第84回大会
    • Related Report
      2020 Research-status Report
  • [Presentation] ABCB14 regulates local cell growth in Physcomitrella patens2020

    • Author(s)
      Liechi Zhang, Tsuyoshi Aoyama, Takashi Murata, Ken Kosetsu, Yukiko Kabeya, Masaki ishikawa, Mitsuyasu Hasebe
    • Organizer
      日本植物学会 第84回大会
    • Related Report
      2020 Research-status Report
  • [Presentation] Molecular mechanisms underlying stem cell formation in plants2020

    • Author(s)
      Masaki Ishikawa
    • Organizer
      the JSDB online trial meeting 2020
    • Related Report
      2020 Research-status Report
    • Invited
  • [Presentation] ヒメツリガネゴケから見えてきた幹細胞新生におけるオーキシンの役割2020

    • Author(s)
      石川雅樹, 青山剛士, 長谷部光泰
    • Organizer
      第61回日本植物生理学会年会
    • Related Report
      2019 Research-status Report
    • Invited
  • [Presentation] ヒメツリガネゴケ CDKA の光応答における制御機構2020

    • Author(s)
      井上夏実, Liang Bao, 菅原駿人, 石川雅樹, 後藤栄治, 関根政実, Ooi-Kock Teh, 長谷部光泰, 和田正三, 藤田知道
    • Organizer
      第61回日本植物生理学会年会
    • Related Report
      2019 Research-status Report
  • [Presentation] STEMIN transcription factor induces reprogramming of differentiated cells to stem cells in the moss Physcomitrella patens2020

    • Author(s)
      Masaki Ishikawa, Mio Morishita, Yukiko Kabeya, Mitsuyasu Hasebe
    • Organizer
      International Symposium: Principles of pluripotent stem cells underlying plant vitality
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research
  • [Presentation] STEMIN transcription factor induces stem cell formation with local histone modifications in the moss Physcomitrella patens2020

    • Author(s)
      Masaki Ishikawa, Mio Morishita, Mitsuyasu Hasebe
    • Organizer
      Marchantia Workshop 2019
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] 植物の幹細胞新生を司る分子基盤の解明にむけて2019

    • Author(s)
      石川雅樹
    • Organizer
      植物科学シンポジウム2019 SDGsに向けた植物科学の展開
    • Related Report
      2019 Research-status Report
    • Invited
  • [Presentation] STEMIN1 transcription factor induces stem cell formation with local histone modifications in the moss Physcomitrella patens2019

    • Author(s)
      Mio Morishita, Masaki Ishikawa, Tomoaki Nishiyama, Shuji Shigenobu, Yosuke Tamada, Mitsuyasu Hasebe
    • Organizer
      International Symposium: Principles of pluripotent stem cells underlying plant vitality
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research
  • [Presentation] RNA-seq data analysis of CDKA double knockout in Physcomitrella patens and investigation into affected potassium transport and photosynthesis pathways2019

    • Author(s)
      Brody Frink, Atsushi Takabayashi, Masaki Ishikawa, Yuzuru Suzuki, Sumio Sagano Ayumi, Tanaka, Mitsuyasu Hasebe, Tomomichi Fujita
    • Organizer
      日本植物学会第82回大会
    • Related Report
      2018 Research-status Report
    • Invited
  • [Presentation] Requirement Of Kinase Activity Of CDKA On The Novel Functions In The Moss, Physcomitrella patens2019

    • Author(s)
      Eggie Febrianto Ginanjar, Masaki Ishikawa, Masami Sekine, Natsumi Inoue, Mitsuyasu Hasebe, Ooi-Kock Teh, Tomomichi Fujita
    • Organizer
      第60回 日本植物生理学会年会
    • Related Report
      2018 Research-status Report
    • Invited
  • [Presentation] 陸上植物がもつ細胞の分化状態を打破するシステム2018

    • Author(s)
      石川雅樹, 森下美生, 重信秀治, 長谷部光泰
    • Organizer
      日本植物学会第82回大会
    • Related Report
      2018 Research-status Report
    • Invited
  • [Presentation] DNA damage induces cellular reprogramming of differentiated cells to stem cells in the moss Physcomitrella patens2018

    • Author(s)
      Nan Gu, Yosuke Tamada, Akihiro Imai, Gergo Palfalvi, Shuji Shigenobu, Masaki Ishikawa, Chunli Chen, Mitsuyasu Hasebe
    • Organizer
      日本遺伝学会第90回大会 国際シンポジウム
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research / Invited
  • [Remarks] 基礎生物学研究所 生物進化研究部門

    • URL

      http://www.nibb.ac.jp/sections/evolutionary_biology_and_biodiversity/hasebe/

    • Related Report
      2021 Annual Research Report 2020 Research-status Report 2019 Research-status Report 2018 Research-status Report
  • [Remarks] 基礎生物学研究所 生物進化研究部門 長谷部研究室

    • URL

      http://www.nibb.ac.jp/evodevo/

    • Related Report
      2021 Annual Research Report 2020 Research-status Report 2019 Research-status Report 2018 Research-status Report

URL: 

Published: 2018-04-23   Modified: 2023-01-30  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi