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Identification of circatidal clock genes in the mangrove cricket

Research Project

Project/Area Number 18K06330
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Review Section Basic Section 44050:Animal physiological chemistry, physiology and behavioral biology-related
Research InstitutionThe Graduate University for Advanced Studies

Principal Investigator

Satoh Aya  総合研究大学院大学, 先導科学研究科, 連携研究員 (60378560)

Co-Investigator(Kenkyū-buntansha) 寺井 洋平  総合研究大学院大学, 先導科学研究科, 助教 (30432016)
Project Period (FY) 2018-04-01 – 2021-03-31
Project Status Completed (Fiscal Year 2020)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2020: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2019: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2018: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Keywords体内時計 / 概潮汐時計 / 時計遺伝子 / マングローブ / コオロギ / RNA干渉法 / RNA-seq / 潮汐サイクル / 潮間帯 / 潮汐 / 概潮汐リズム
Outline of Final Research Achievements

Mangrove crickets Apteronemobius asahinai are endemic to mangrove forest floors. They show circatidal rhythmicity with the period of 12.6 hours in their locomotor activity under constant condition. Little is known about the molecular mechanisms underlying the circatidal clock. To identify circatidal clock genes, we investigated rhythmic gene expression under constant darkness by RNA-seq. We identified higher number of transcripts with circatidal rhythmicity (284) than those with circadian (206). We also determined a high quality draft genome sequence of mangrove crickets. These dataset will facilitate further investigation of circatidal clock genes.

Academic Significance and Societal Importance of the Research Achievements

本研究では,これまでどの生物においても特定されていない概潮汐時計遺伝子を解明するため,恒常条件下で発現量が概潮汐リズムを示す遺伝子群を特定できた。また,分子基盤解明の重要な情報となるゲノム配列を高精度に決定することができた。これらの研究成果は,概潮汐時計の分子基盤の今後の解明に大きく貢献すると期待される。

Report

(4 results)
  • 2020 Annual Research Report   Final Research Report ( PDF )
  • 2019 Research-status Report
  • 2018 Research-status Report
  • Research Products

    (4 results)

All 2021 2019

All Journal Article (2 results) (of which Peer Reviewed: 1 results,  Open Access: 1 results) Presentation (2 results) (of which Int'l Joint Research: 1 results)

  • [Journal Article] マングローブ林に見られる昆虫と潮汐に対応した体内時計2021

    • Author(s)
      佐藤綾
    • Journal Title

      海洋と生物

      Volume: 43 Pages: 19-25

    • Related Report
      2020 Annual Research Report
  • [Journal Article] Circatidal gene expression in the mangrove cricket Apteronemobius asahinai2019

    • Author(s)
      Satoh Aya、Terai Yohey
    • Journal Title

      Scientific Reports

      Volume: 9 Issue: 1 Pages: 1-7

    • DOI

      10.1038/s41598-019-40197-2

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] マングローブスズにおける概潮汐時計遺伝子の探索2019

    • Author(s)
      佐藤綾,寺井洋平,高須美羽子
    • Organizer
      第26回日本時間生物学会学術大会
    • Related Report
      2019 Research-status Report
  • [Presentation] Circatidal gene expression in the mangrove cricket Apteronemobius asahinai: searching for the circatidal clock genes2019

    • Author(s)
      Satoh Aya、Terai Yohey
    • Organizer
      5th World Congress of Chronobiology
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research

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Published: 2018-04-23   Modified: 2022-01-27  

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