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NGS of multiple onset schizophrenia families

Research Project

Project/Area Number 18K07554
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Review Section Basic Section 52030:Psychiatry-related
Research InstitutionNagoya University

Principal Investigator

Aleksic Branko  名古屋大学, 医学系研究科(国際), 特任准教授 (60547511)

Project Period (FY) 2018-04-01 – 2021-03-31
Project Status Completed (Fiscal Year 2020)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2020: ¥390,000 (Direct Cost: ¥300,000、Indirect Cost: ¥90,000)
Fiscal Year 2019: ¥390,000 (Direct Cost: ¥300,000、Indirect Cost: ¥90,000)
Fiscal Year 2018: ¥3,510,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥810,000)
Keywordsexome seqencing / exome sequencing / Whole exome sequencing / Genome / Sequencing / Psychiatry / NGS
Outline of Final Research Achievements

In this research we dissected genetic architecture of schizophrenia using families with multiple affected members. Until now most family based exome sequencing used trio based design and research was focused mainly on de novo variants (i.e. variants that are not present in parents but exist in affected children). In the current research besides de novo variants we focused on inherited variants. These are variants that are present in all affected member in one pedigree. In addition we investigated variants that are rare and of high impact (i.e. splice site mutation and/or nonsense variants), which may be family specific but exhibit incomplete penetrance (i.e. present in both affected and non affected members of the same family.

Academic Significance and Societal Importance of the Research Achievements

This research helped to alleviate misconceptions and reduce stigma through an improved understanding of the genetic cause of psychiatric disorders, and eventually offer support to patients and their families.

Report

(4 results)
  • 2020 Annual Research Report   Final Research Report ( PDF )
  • 2019 Research-status Report
  • 2018 Research-status Report
  • Research Products

    (5 results)

All 2020 2018

All Journal Article (5 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 5 results,  Open Access: 4 results)

  • [Journal Article] Characterization of a schizophrenia patient with a rare RELN deletion by combining genomic and patient-derived cell analyses2020

    • Author(s)
      Arioka Yuko,Hirata Akihiro,Kushima Itaru,Aleksic Branko,Mori Daisuke,Ozaki Norio
    • Journal Title

      Schizophrenia Research

      Volume: 216 Pages: 511-515

    • DOI

      10.1016/j.schres.2019.10.038

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Rare single-nucleotide DAB1 variants and their contribution to Schizophrenia and autism spectrum disorder susceptibility2020

    • Author(s)
      Nawa Yoshihiro、Kimura Hiroki、Mori Daisuke、Kato Hidekazu、Toyama Miho、Furuta Sho、Yu Yanjie、Ishizuka Kanako、Kushima Itaru、Aleksic Branko、Arioka Yuko、Morikawa Mako、Okada Takashi、Inada Toshiya、Kaibuchi Kozo、Ikeda Masashi、Iwata Nakao、Suzuki Michio、Okahisa Yuko、Egawa Jun et al
    • Journal Title

      Human Genome Variation

      Volume: 7 Issue: 1 Pages: 37-37

    • DOI

      10.1038/s41439-020-00125-7

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Pharmacotherapy of restricted/repetitive behavior in autism spectrum disorder:a systematic review and meta-analysis2020

    • Author(s)
      Yu Yanjie、Chaulagain Ashmita、Pedersen Sindre Andre、Lydersen Stian、Leventhal Bennett L.、Szatmari Peter、Aleksic Branko、Ozaki Norio、Skokauskas Norbert
    • Journal Title

      BMC Psychiatry

      Volume: 20 Issue: 1

    • DOI

      10.1186/s12888-020-2477-9

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Assessment of a glyoxalase I frameshift variant, p.P122fs, in Japanese patients with schizophrenia.2018

    • Author(s)
      Ishizuka K, Kimura H, Kushima I, Inada T, Okahisa Y, Ikeda M, Iwata N, Mori D, Aleksic B, Ozaki N.
    • Journal Title

      Psychiatr Genet.

      Volume: 5 Issue: 5 Pages: 90-93

    • DOI

      10.1097/ypg.0000000000000204

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Rare loss of function mutations in N-methyl-d-aspartate glutamate receptors and their contributions to schizophrenia susceptibility2018

    • Author(s)
      Yu Yanjie、Lin Yingni、Takasaki Yuto、Wang Chenyao、Kimura Hiroki、Xing Jingrui、Ishizuka Kanako、Toyama Miho、Kushima Itaru、Mori Daisuke、Arioka Yuko、Uno Yota、Shiino Tomoko、Nakamura Yukako、Okada Takashi、Morikawa Mako、Ikeda Masashi、Iwata Nakao、Okahisa Yuko、Takaki Manabu、Sakamoto Shinji、et al.
    • Journal Title

      Translational Psychiatry

      Volume: 8 Issue: 1 Pages: 12-20

    • DOI

      10.1038/s41398-017-0061-y

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research

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Published: 2018-04-23   Modified: 2022-01-27  

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