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Development of hemodiagnosis for early detection of ovarian cancer with AI using glycopeptide peaks obtained from CSGSA (Comprehensive Serum Glycopeptide Spectra Analysis)

Research Project

Project/Area Number 18K09300
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Review Section Basic Section 56040:Obstetrics and gynecology-related
Research InstitutionTokai University

Principal Investigator

IKEDA Masae  東海大学, 医学部, 講師 (20365993)

Co-Investigator(Kenkyū-buntansha) 信田 政子  東海大学, 医学部, 講師 (10338717)
三上 幹男  東海大学, 医学部, 教授 (30190606)
柴田 健雄  東海大学, 健康学部, 講師 (30366033)
平澤 猛  東海大学, 医学部, 准教授 (70307289)
Project Period (FY) 2018-04-01 – 2021-03-31
Project Status Completed (Fiscal Year 2020)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2020: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2019: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2018: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Keywords卵巣癌 / 血清バイオマーカー / 糖ペプチド / 質量分析 / 人工知能 / 深層学習 / リキッドバイオプシー / 腫瘍マーカー / 早期診断 / がん検診
Outline of Final Research Achievements

Ovarian cancer is a leading cause of deaths among gynecological cancers, and a method to detect early-stage epithelial ovarian cancer (EOC) is urgently needed. We aimed to develop an artificial intelligence (AI)-based CSGSA method (CSGSA-AI) in combination with convolutional neural network (CNN) to detect aberrant glycans in serum samples of patients with EOC. We converted serum glycopeptide expression patterns into two-dimensional (2D) barcodes to let CNN learn and distinguish between EOC and non-EOC. CNN was trained using 60% samples and validated using 40% samples. We observed that principal component analysis-based alignment of glycopeptides to generate 2D barcodes significantly increased the diagnostic accuracy (88%) of the method. When CNN was trained with 2D barcodes colored on the basis of serum levels of CA125 and HE4, a diagnostic accuracy of 95% was achieved. We believe that this simple and low-cost method will increase the detection of EOC.

Academic Significance and Societal Importance of the Research Achievements

卵巣癌は早期発見が難しくかつ予後も極めて悪い癌であり、新たな発想の新規診断技術導入が重要である。腫瘍マーカーは単一分子と認識され研究されてきたが、現状では卵巣癌早期診断は不可能であろう。そこで古い概念を打ち破り、究極のCombination Assayと考えられる網羅的血清糖ペプチドピークと人工知能を用いた卵巣癌早期診断の開発し、現在汎用されている卵巣癌マーカーであるCA125とHE4よりも有意に初期卵巣癌を判別できる診断法を開発した。

Report

(4 results)
  • 2020 Annual Research Report   Final Research Report ( PDF )
  • 2019 Research-status Report
  • 2018 Research-status Report
  • Research Products

    (18 results)

All 2020 2019 2018

All Journal Article (12 results) (of which Int'l Joint Research: 4 results,  Peer Reviewed: 12 results,  Open Access: 9 results) Presentation (6 results) (of which Int'l Joint Research: 6 results)

  • [Journal Article] Comprehensive Serum Glycopeptide Spectra Analysis Combined with Artificial Intelligence (CSGSA-AI) to Diagnose Early-Stage Ovarian Cancer.2020

    • Author(s)
      Tanabe K, Ikeda M, Hayashi M, Matsuo K, Yasaka M, Machida H, Shida M, Katahira T, Imanishi T, Hirasawa T, Sato K, Yoshida H, Mikami M.
    • Journal Title

      Cancers (Basel)

      Volume: 12(9) Issue: 9 Pages: 2373-2373

    • DOI

      10.3390/cancers12092373

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Epidemiological guideline influence on the therapeutic trend and patient outcome of uterine cervical cancer in Japan: Japan society of gynecologic oncology guideline evaluation committee project.2020

    • Author(s)
      Shigeta S, Shida M, Nagase S, Ikeda M, Takahashi F, Shibata T, Yamagami W, Katabuchi H, Yaegashi N, Aoki D, Mikami M
    • Journal Title

      Gynecol Oncol

      Volume: 159 Issue: 1 Pages: 248-255

    • DOI

      10.1016/j.ygyno.2020.07.023

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Utility of Comprehensive Serum Glycopeptide Spectra Analysis (CSGSA) for the Detection of Early Stage Epithelial Ovarian Cancer.2020

    • Author(s)
      Matsuo K, Tanabe K, Hayashi M, Ikeda M, Yasaka M, Machida H, Shida M, Sato K, Yoshida H, Hirasawa T, Imanishi T, Mikami M.
    • Journal Title

      Cancers (Basel)

      Volume: 12(9) Issue: 9 Pages: 2374-2374

    • DOI

      10.3390/cancers12092374

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Analysis of pathological and clinical characteristics of cervical conization according to age group in Japan.2020

    • Author(s)
      Murakami I, Ohno A, Ikeda M, Yamashita H, Mikami M, Kobayashi Y, Nagase S, Yokoyama M, Enomoto T, Katabuchi H.
    • Journal Title

      Heliyon

      Volume: 6(10) Issue: 10 Pages: e05193-e05193

    • DOI

      10.1016/j.heliyon.2020.e05193

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Usefulness of laparoscopic restaging surgery for patients diagnosed with apparent early ovarian/fallopian tubal cancer by a prior surgery, a case control observational study in a single institute in Japan.2020

    • Author(s)
      Yoshida H, Yamamoto M, Shigeta H, Yasaka M, Machida H, Ikeda M, Shida M, Hirasawa T, Mikami M.
    • Journal Title

      Eur J Gynaecol Oncol

      Volume: 41(6) Issue: 6 Pages: 960-968

    • DOI

      10.31083/j.ejgo.2020.06.2224

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Value and limitation of conization as a diagnostic procedure for cervical neoplasm.2019

    • Author(s)
      Yamamoto R, Sekiyama K, Higuchi T, Ikeda M, Mikami M, Kobayashi Y, Nagase S, Yokoyama M, Enomoto T, Katabuchi H.
    • Journal Title

      J Obstet Gynaecol Res

      Volume: 45(12) Issue: 12 Pages: 2419-2424

    • DOI

      10.1111/jog.14118

    • Related Report
      2019 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Comprehensive Serum Glycopeptide Spectra Analysis (CSGSA): A Potential New Tool for Early Detection of Ovarian Cancer.2019

    • Author(s)
      Hayashi M, Matsuo K, Tanabe K, Ikeda M, Miyazawa M, Yasaka M, Machida H, Shida M, Imanishi T, Grubbs BH, Hirasawa T, Mikami M.
    • Journal Title

      Cancers (Basel)

      Volume: 11(5) Issue: 5 Pages: 591-591

    • DOI

      10.3390/cancers11050591

    • NAID

      130007556094

    • Related Report
      2019 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Difficult Diagnosis of Peritoneal Serous Papillary Carcinoma in a 63-year-old Woman: A Case Report.2019

    • Author(s)
      Tsuda B, Kajiwara H, Sakota N, Amatsu S, Tanaka A, Ikeda M.
    • Journal Title

      Tokai J Exp Clin Med

      Volume: 44(3) Pages: 49-53

    • Related Report
      2019 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] The Clinical Features of Recurrent Endometrial Cancer in Japan: Chemotherapy Instead of Radiotherapy as Postoperative Adjuvant Treatment2018

    • Author(s)
      Iwase Haruko、Furukawa Seigi、Hirasawa Takeshi、Asai Satoshi、Ohara Tatsuru、Hosonuma Shinji、Endo Shinichi、Tazo Yuki、Sato Hidetaka、Takada Toshio、Arai Masahide、Ikeda Masae、Shida Masako、Yoshioka Norihito、Tozawa-Ono Akiko、Suzuki Nao、Mikami Mikio、Onda Takashi
    • Journal Title

      International Journal of Gynecologic Cancer

      Volume: 28 Issue: 8 Pages: 1616-1623

    • DOI

      10.1097/igc.0000000000001346

    • Related Report
      2018 Research-status Report
    • Peer Reviewed
  • [Journal Article] The use of conization to identify and treat severe lesions among prediagnosed CIN1 and 2 patients in Japan2018

    • Author(s)
      Mikami Mikio、Ikeda Masae、Sato Hidetaka、Iwase Haruko、Enomoto Takayuki、Kobayashi Yoichi、Katabuchi Hidetaka
    • Journal Title

      Journal of Gynecologic Oncology

      Volume: 29 Issue: 4

    • DOI

      10.3802/jgo.2018.29.e46

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Fully sialylated alpha-chain of complement 4-binding protein (A2160): a novel prognostic marker for epithelial ovarian carcinoma2018

    • Author(s)
      Matsuo Koji、Tanabe Kazuhiro、Ikeda Masae、Shibata Takeo、Kajiwara Hiroshi、Miyazawa Masaki、Miyazawa Mariko、Hayashi Masaru、Shida Masako、Hirasawa Takeshi、Roman Lynda D.、Mikami Mikio
    • Journal Title

      Archives of Gynecology and Obstetrics

      Volume: 297 Issue: 3 Pages: 749-756

    • DOI

      10.1007/s00404-018-4658-z

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] UPLC-MS/MS based diagnostics for epithelial ovarian cancer using fully sialylated C4-binding protein2018

    • Author(s)
      Tanabe Kazuhiro、Matsuo Koji、Miyazawa Masaki、Hayashi Masaru、Ikeda Masae、Shida Masako、Hirasawa Takeshi、Sho Ryuichiro、Mikami Mikio
    • Journal Title

      Biomedical Chromatography

      Volume: 32 Issue: 5

    • DOI

      10.1002/bmc.4180

    • Related Report
      2018 Research-status Report
    • Peer Reviewed
  • [Presentation] NGS-based molecular profiling ( a multi-center collaborative, observation study in Japan) highlights pathogenic variants of DNA-repair genes in advanced or recurrent endometrial cancer.2020

    • Author(s)
      Fujiwara H, Oda K, Takahashi N, Sakata J, Taneichi A, Ikeda M, Tanikawa M, Kusakabe M, Mitsuhashi A, Kobayashi Y, Yamashita H, Suzuki N, Akiyama A, Tokunaga H, Tanaka N, Mikami M
    • Organizer
      ASCO2020 The American Society of Clinical Oncology
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Early ovarian cancer detection by deep learning: Two-dimensional comprehensive serum glycopeptide spectra analysis.2020

    • Author(s)
      M Mikami, K Tanabe, K Matsuo, M Ikeda, M Hayashi, M Yasaka, H Machida, M SHida, T Hirasawa, T Imanishi
    • Organizer
      SGO 2020 Annual Meeting on Women's Cancer
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research
  • [Presentation] Comprehensive Serum Glycopeptide Spectra Analysis (CSGSA) might be a new2018

    • Author(s)
      M Ikeda, M Mikami, K Tanabe, K Matsuo, M Miyazawa, M Hayashi, H Machida,
    • Organizer
      ASGO 5th International Workshop on Gynecologic Onclology
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] Diagnosis of early stage ovarian clear cell carcinoma (CCC) and endometrioid carcinoma (EMC) - the combination assay of A2160 ( Alpha-chain of Complement 4-Binding Protein with Fully-Sialylated Glycans)2018

    • Author(s)
      M Hayashi, M Miyazawa, M Miyazawa, H Machida, M Ikeda, M Shida, THirasawa,
    • Organizer
      ASGO 5th International Workshop on Gynecologic Onclology
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] Predictors for Positive Surgical Margin of Cervical Intraepithelial Neoplasia Grade 3 After Therapeutic Cervical Conization: A Retrospective Multicenter Study2018

    • Author(s)
      M Yasaka, M Ikeda, M Shida, T Hirasawa, M Mikami, Y Kobayashi, S Nagase, M Yokoyama, T Enomoto, H Katabuchi
    • Organizer
      17th Biennial Meeting of the International Gynecologic Cancer Society ( IGCS2018 )
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] Prevention of Preterm Delivery After Cervical Conization for Cervical2018

    • Author(s)
      T Narayama, M Ikeda, M Shida, T Hirasawa, M Mikami, Y Kobayashi, S Nagase, M Yokoyama, T Enomoto, H Katabuchi
    • Organizer
      17th Biennial Meeting of the International Gynecologic Cancer Society ( IGCS2018 )
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research

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Published: 2018-04-23   Modified: 2022-01-27  

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