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Analysis of the effector secretion pathway of plant pathogenic fungi using chemical genetics

Research Project

Project/Area Number 18K14440
Research Category

Grant-in-Aid for Early-Career Scientists

Allocation TypeMulti-year Fund
Review Section Basic Section 38060:Applied molecular and cellular biology-related
Research InstitutionInstitute of Physical and Chemical Research

Principal Investigator

Naoyoshi Kumakura  国立研究開発法人理化学研究所, 環境資源科学研究センター, 研究員 (50815438)

Project Period (FY) 2018-04-01 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2019: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2018: ¥3,120,000 (Direct Cost: ¥2,400,000、Indirect Cost: ¥720,000)
Keywordsエフェクター分泌 / マーカーリサイクリング / CRISPR / エフェクター分泌阻害剤 / CRISPR/CAS9 / 植物病原糸状菌 / 炭疽病菌 / エフェクター / ケミカルジェネティクス
Outline of Final Research Achievements

Phytopathogenic fungi secrete effector proteins to break down immune responses and physical barriers, such as cell walls, of host plants to establish infection. Although the secretion of effectors is precisely regulated in space and time, suggesting the existence of a specific secretory pathway, the molecular mechanism of the secretion is not clarified. In this study, I aimed to elucidate and analyze the molecular mechanism of effector secretion using the effector secretion inhibitors of the Colletotrichum fungi. This study identified target candidate genes for effector secretion inhibitors. Furthermore, I have succeeded in developing a marker recycling method for Colletotrichum orbiculare, a causing agent of anthracnose of Cucurbits, that enables the analysis of functionally redundant genes.

Academic Significance and Societal Importance of the Research Achievements

世界中で多額の作物被害をもたらす植物病原糸状菌は基礎・応用の両面で重要な研究対象である。本研究では植物病原菌が感染時に分泌するエフェクターの分泌阻害剤に機能アノテーションを付与した。また、モデル植物病害糸状菌における高効率な多重変異体作製技術の開発にも成功した。本手法は、エフェクター分泌に寄与する遺伝子のみならず、病原性に寄与するエフェクター研究にも応用可能であるため、植物病害糸状菌の感染戦略の分子メカニズム解明に寄与することが期待できる。

Report

(3 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Research-status Report
  • Research Products

    (7 results)

All 2020 2019 2018

All Journal Article (3 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 3 results,  Open Access: 3 results) Presentation (4 results) (of which Int'l Joint Research: 3 results)

  • [Journal Article] Subtelomeric regions and a repeat-rich chromosome harbor multicopy effector gene clusters with variable conservation in multiple plant pathogenic Colletotrichum species2020

    • Author(s)
      Gan Pamela、Hiroyama Ryoko、Tsushima Ayako、Masuda Sachiko、Shibata Arisa、Ueno Akiko、Kumakura Naoyoshi、Narusaka Mari、Hoat Trinh Xuan、Narusaka Yoshihiro、Takano Yoshitaka、Shirasu Ken
    • Journal Title

      bioRxiv

      Volume: -

    • DOI

      10.1101/2020.04.28.061093

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Genomic Plasticity Mediated by Transposable Elements in the Plant Pathogenic Fungus Colletotrichum higginsianum2019

    • Author(s)
      Tsushima Ayako、Gan Pamela、Kumakura Naoyoshi、Narusaka Mari、Takano Yoshitaka、Narusaka Yoshihiro、Shirasu Ken
    • Journal Title

      Genome Biology and Evolution

      Volume: - Issue: 5 Pages: 1487-1500

    • DOI

      10.1093/gbe/evz087

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Establishment of a selection marker recycling system for sequential transformation of the plant-pathogenic fungus Colletotrichum orbiculare2018

    • Author(s)
      Kumakura Naoyoshi、Ueno Akiko、Shirasu Ken
    • Journal Title

      Molecular Plant Pathology

      Volume: 20 Issue: 3 Pages: 447-459

    • DOI

      10.1111/mpp.12766

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] ウリ類炭疽病菌の二次代謝物生合成酵素遺伝子PKS13は宿主植物葉への侵入に必要である2020

    • Author(s)
      熊倉直祐, Pamela Gan, 石濱伸明, 白須賢
    • Organizer
      令和2年度日本植物病理学会大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Fungal phytopathogen-secreted ribonucleases potentiate host immune responses2019

    • Author(s)
      Naoyoshi Kumakura, Suthitar Singkaravanit-Ogawa, Pamela Gan1, Ayako Tsushima1,3, Mari Narusaka4, Yoshihiro Narusaka, Yoshitaka Takano, Ken Shirasu
    • Organizer
      30th Fungal Genetics Conference
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Colletotrichum orbiculare ribonuclease-type effectors potentiate host immune responses in their catalytic residues dependent manner2019

    • Author(s)
      Naoyoshi Kumakura, Suthitar Singkaravanit-Ogawa, Pamela Gan1, Ayako Tsushima1,3, Mari Narusaka4, Yoshihiro Narusaka, Yoshitaka Takano, Ken Shirasu
    • Organizer
      IS-MPMI XVIII Congress
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Fungal phytopathogen-secreted ribonucleases are virulent effectors that potentiate host immune responses2019

    • Author(s)
      Naoyoshi Kumakura, Suthitar Singkaravanit-Ogawa, Pamela Gan, Ayako Tsushima, Mari Narusaka, Yoshihiro Narusaka, Yoshitaka Takano and Ken Shirasu
    • Organizer
      The 30th Fungal Genetics Conference
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research

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Published: 2018-04-23   Modified: 2021-02-19  

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