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Shedding light on genome evolution of a 220-million-year old's cockroach friend: Blattabacterium cuenoti

Research Project

Project/Area Number 18K14767
Research Category

Grant-in-Aid for Early-Career Scientists

Allocation TypeMulti-year Fund
Review Section Basic Section 45020:Evolutionary biology-related
Research InstitutionOkinawa Institute of Science and Technology Graduate University

Principal Investigator

Bourguignon Thomas  沖縄科学技術大学院大学, 進化ゲノミクスユニット, 准教授 (40817558)

Project Period (FY) 2018-04-01 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2019: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2018: ¥3,120,000 (Direct Cost: ¥2,400,000、Indirect Cost: ¥720,000)
Keywordscockroach / Blattabacterium / symbiosis / endosymbiont / blattabacterium / genome evolution / Endosymbionts / genome reduction / genome
Outline of Final Research Achievements

I sequenced, assembled and annotated >50 Blattabacterium genomes that I used to identify the factors at the origin of genome erosion in endosymbionts. I found that the main factor linked to genome reduction in Blattabacterium was mutation rate. Other factors driving gene loss include relaxed selection, and the domino effect caused by the loss of metabolically related genes. However, genetic drift resulting from population bottlenecks showed no correlation with gene loss, suggesting that the Muller’s Ratchet plays no significant role in Blattabacterium genome erosion. This project therefore improved our understanding of the evolution of small genomes in insect endosymbionts.

Academic Significance and Societal Importance of the Research Achievements

We already published one paper in Genome Biology and Evolution (IF: 3.73). For another paper, we resubmitted a revised version that addressed the comments of the reviewers and is now under reevaluation for publication in Current Biology (IF: 9.19). I expect one last paper to be submitted this year.

Report

(3 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Research-status Report
  • Research Products

    (3 results)

All 2019 2018

All Journal Article (2 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 1 results,  Open Access: 1 results) Presentation (1 results) (of which Int'l Joint Research: 1 results)

  • [Journal Article] Evolutionary rates are correlated between cockroach symbiont and mitochondrial genomes2019

    • Author(s)
      Arab Daej A.、Bourguignon Thomas、Wang Zongqing、Ho Simon Y. W.、Lo Nathan
    • Journal Title

      biorxiv

      Volume: NA

    • DOI

      10.1101/542241

    • Related Report
      2018 Research-status Report
  • [Journal Article] Parallel and Gradual Genome Erosion in the Blattabacterium Endosymbionts of Mastotermes darwiniensis and Cryptocercus Wood Roaches2018

    • Author(s)
      Kinjo Yukihiro、Bourguignon Thomas、Tong Kwei Jun、Kuwahara Hirokazu、Lim Sang Jin、Yoon Kwang Bae、Shigenobu Shuji、Park Yung Chul、Nalepa Christine A、Hongoh Yuichi、Ohkuma Moriya、Lo Nathan、Tokuda Gaku
    • Journal Title

      Genome Biology and Evolution

      Volume: 10 Issue: 6 Pages: 1622-1630

    • DOI

      10.1093/gbe/evy110

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] 過去2億3千万年のゴキブリ-ブラタバクテリウムのゲノム浸食2018

    • Author(s)
      Thomas Bourguignon
    • Organizer
      Entomological Society of Japan
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research

URL: 

Published: 2018-04-23   Modified: 2021-02-19  

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