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Analysis of heat-response gene regulation through norvel nuclear body by containing the noncoding RNA

Research Project

Project/Area Number 18K14899
Research Category

Grant-in-Aid for Early-Career Scientists

Allocation TypeMulti-year Fund
Review Section Basic Section 47030:Pharmaceutical hygiene and biochemistry-related
Research InstitutionThe University of Tokyo

Principal Investigator

Onoguchi-Mizutani Rena  東京大学, アイソトープ総合センター, 特任助教 (30780697)

Project Period (FY) 2018-04-01 – 2022-03-31
Project Status Completed (Fiscal Year 2021)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2019: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Fiscal Year 2018: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywords熱ストレス応答 / 核内構造体 / 長鎖非コードRNA / 非コードRNA
Outline of Final Research Achievements

We found that heat shock induces translocation of MALAT1 noncoding RNA from nuclear speckle to a distinct nuclear body named HiNoCo body. In this study, I tried to reveal the heat-response gene regulation through MALAT1/HiNoCo body. I identified the heat-responsible mRNAs and open chromatin region which were altered in MALAT1 knockout cells. We also found that MALAT1 interacted with specific Genomic DNA region in heat shock condition.

Academic Significance and Societal Importance of the Research Achievements

本研究により、MALAT1非コードRNAが熱ストレスに応答して局在変化することで、通常時と熱ストレス時では異なる遺伝子発現の制御に関与することが示唆された。本研究は「非コードRNAの局在変化を基盤とした熱応答性遺伝子の発現制御」という新しい熱ストレス応答機構の発見につながる、先駆的な事例となることが期待される。

Report

(5 results)
  • 2021 Annual Research Report   Final Research Report ( PDF )
  • 2020 Research-status Report
  • 2019 Research-status Report
  • 2018 Research-status Report
  • Research Products

    (9 results)

All 2022 2021 2020 2019 2018

All Journal Article (5 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 4 results,  Open Access: 2 results) Presentation (4 results) (of which Int'l Joint Research: 2 results,  Invited: 1 results)

  • [Journal Article] Long noncoding RNA and phase separation in cellular stress response2022

    • Author(s)
      Onoguchi-Mizutani Rena、Akimitsu Nobuyoshi
    • Journal Title

      The Journal of Biochemistry

      Volume: 171 Issue: 3 Pages: 269-276

    • DOI

      10.1093/jb/mvab156

    • Related Report
      2021 Annual Research Report
  • [Journal Article] Identification of heat-inducible long noncoding RNA MALAT1 -containing novel nuclear (HiNoCo) body2021

    • Author(s)
      Rena Onoguchi-Mizutani, Yoshitaka Kirikae, Yoko Ogura, Tony Gutschner, Sven Diederichs, Nobuyoshi Akimitsu
    • Journal Title

      The journal of Cell Science

      Volume: -

    • Related Report
      2020 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Identification of novel heat shock-induced long non-coding RNA in human cells2020

    • Author(s)
      Onoguchi-Mizutani Rena、Kishi Yoshihiro、Ogura Yoko、Nishimura Yuuki、Imamachi Naoto、Suzuki Yutaka、Miyazaki Satoru、Akimitsu Nobuyoshi
    • Journal Title

      The Journal of Biochemistry

      Volume: - Issue: 4 Pages: 497-505

    • DOI

      10.1093/jb/mvaa126

    • Related Report
      2020 Research-status Report
    • Peer Reviewed
  • [Journal Article] Identification of Minimal p53 Promoter Region Regulated by MALAT1 in Human Lung Adenocarcinoma Cells.2018

    • Author(s)
      Tano K, Onoguchi-Mizutani R, Yeasmin F, Uchiumi F, Suzuki Y, Yada T, Akimitsu N
    • Journal Title

      frontiers in Genetics

      Volume: なし Pages: 208-208

    • DOI

      10.3389/fgene.2017.00208

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Diminished nuclear RNA decay upon Salmonella infection upregulates antibacterial noncoding RNAs2018

    • Author(s)
      Imamura Katsutoshi、Takaya Akiko、Ishida Yo‐ichi、Fukuoka Yayoi、Taya Toshiki、Nakaki Ryo、Kakeda Miho、Imamachi Naoto、Sato Aiko、Yamada Toshimichi、Onoguchi‐Mizutani Rena、Akizuki Gen、Tanu Tanzina、Tao Kazuyuki、Miyao Sotaro、Suzuki Yutaka、Nagahama Masami、Yamamoto Tomoko、Jensen Torben Heick、Akimitsu Nobuyoshi
    • Journal Title

      The EMBO Journal

      Volume: 37 Issue: 13

    • DOI

      10.15252/embj.201797723

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] 非コードRNAを含有する熱ストレス応答性の新規核内構造体, HiNoCo-bodyの同定2021

    • Author(s)
      小野口玲菜、秋光信佳
    • Organizer
      日本薬学会第141年会(広島)
    • Related Report
      2020 Research-status Report
  • [Presentation] Characterization of heat-responsible novel nuclear body containing MALAT1, a long noncoding RNA2019

    • Author(s)
      Rena Onoguchi-Mizutani, Takeshi Kawamura, Yutaka Suzuki, Nobuyoshi, Akimitsu.
    • Organizer
      RNA Control & Regulation -84th Cold Spring Harbor Laboratory Symposium-
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research
  • [Presentation] 長鎖非コードRNAを含有する新規核内構造体, HiNoCo-bodyを介した熱ショック応答機構の解析2018

    • Author(s)
      小野口(水谷) 玲菜、鈴木 穣、川村猛、秋光信佳
    • Organizer
      第20回日本RNA学会
    • Related Report
      2018 Research-status Report
  • [Presentation] Characterization of heat-responsible novel nuclear body containing MALAT12018

    • Author(s)
      Rena Onoguchi-Mizutani
    • Organizer
      第25回Tokyo RNA Club
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research / Invited

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Published: 2018-04-23   Modified: 2024-12-25  

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