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Regulation of pathogenicity through RNA degradation and processing by ribonuclease

Research Project

Project/Area Number 18K15143
Research Category

Grant-in-Aid for Early-Career Scientists

Allocation TypeMulti-year Fund
Review Section Basic Section 49050:Bacteriology-related
Research InstitutionUniversity of Tsukuba

Principal Investigator

Nozomu Obana  筑波大学, 医学医療系, 助教 (00722688)

Project Period (FY) 2018-04-01 – 2021-03-31
Project Status Completed (Fiscal Year 2020)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2020: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2019: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2018: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
KeywordsRNA / リボヌクレアーゼ / バイオフィルム / 温度応答 / 細胞外マトリクス / ウェルシュ菌 / バイオフィルムマトリクス / 温度 / ribonuclease / Clostridium / RNA processing / virulence factor / Ribonulcease / degradosome / RNA切断 / IV型線毛遺伝子 / 毒素遺伝子
Outline of Final Research Achievements

Cells in biofilms dynamically adapt to surrounding environmental conditions, which alters biofilm architecture. The obligate anaerobic pathogen Clostridium perfringens shows different biofilm structures in different temperatures. Here we find that the temperature-regulated production of extracellular polymeric substance (EPS) is necessary for morphological changes in biofilms. We identify BsaA proteins as an EPS matrix necessary for pellicle biofilm formation at lower temperature. We show that bsaA operon is bimodal, and the bsaA-ON population size is increased at a lower temperature. We find that bsaA-ON cells cover bsaA-OFF cells attaching to the bottom surface. This heterogeneity is regulated by the cleavage of the pilA2 mRNA by RNase Y. As temperature is an environmental cue, C. perfringens may modulate EPS expression to induce morphological changes in biofilm structure as a strategy for adapting to interhost and external environments.

Academic Significance and Societal Importance of the Research Achievements

ウェルシュ菌は国内での患者数第3位の食中毒細菌であり、本菌が環境中に生残するメカニズムの解明は重要である。本菌は宿主の体温より低い温度に応答して自らを繊維状タンパク質(細胞外マトリクス)で覆い、強固な集団(バイオフィルム)を形成することで、酸素および抗生物質に対する耐性を向上させることを発見した。このバイオフィルム形成にはRNAの切断を介した遺伝子発現制御機構が必須であることを見出した。バイオフィルムマトリクスやRNA制御に着目したバイオフィルム除去法および食中毒や感染症の予防・治療法の開発が期待される。

Report

(4 results)
  • 2020 Annual Research Report   Final Research Report ( PDF )
  • 2019 Research-status Report
  • 2018 Research-status Report
  • Research Products

    (14 results)

All 2021 2020 2019 2018

All Journal Article (4 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 4 results,  Open Access: 2 results) Presentation (10 results) (of which Int'l Joint Research: 1 results,  Invited: 5 results)

  • [Journal Article] Diversity of physical properties of bacterial extracellular membrane vesicles revealed through atomic force microscopy phase imaging2020

    • Author(s)
      Kikuchi Yousuke、Obana Nozomu、Toyofuku Masanori、Kodera Noriyuki、Soma Takamitsu、Ando Toshio、Fukumori Yoshihiro、Nomura Nobuhiko、Taoka Azuma
    • Journal Title

      Nanoscale

      Volume: 12 Issue: 14 Pages: 7950-7959

    • DOI

      10.1039/c9nr10850e

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Temperature-regulated heterogeneous extracellular matrix gene expression defines biofilm morphology in Clostridium perfringens2020

    • Author(s)
      Obana N, Nakamura K, Nomura N.
    • Journal Title

      NPJ Biofilms Microbiomes

      Volume: 6 Issue: 1 Pages: 29-29

    • DOI

      10.1038/s41522-020-00139-7

    • NAID

      120007147871

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Fungal mycelia and bacterial thiamine establish a mutualistic growth mechanism.2020

    • Author(s)
      Abeysinghe G, Kuchira M, Kudo G, Masuo S, Ninomiya A, Takahashi K, Utada AS, Hagiwara D, Nomura N, Takaya N, Obana N, Takeshita N.
    • Journal Title

      Life Sci Alliance

      Volume: 3 Issue: 12 Pages: e202000878-e202000878

    • DOI

      10.26508/lsa.202000878

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Competence-stimulating peptide-dependent localized cell death and extracellular DNA production in Streptococcus mutans biofilms2020

    • Author(s)
      Nagasawa R, Yamamoto T, Utada AS, Nomura N, Obana N
    • Journal Title

      Applied and Environmental Microbiology

      Volume: 86 Issue: 23 Pages: 1-17

    • DOI

      10.1128/aem.02080-20

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Presentation] 細菌(研究者)の環境適応戦略2021

    • Author(s)
      尾花 望
    • Organizer
      第94回日本細菌学会
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] 腸内細菌が産生するメンブレンベシクルによる 免疫誘導とワクチンプラットフォームへの応用2020

    • Author(s)
      尾花 望
    • Organizer
      第93回日本生化学会大会
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] 転写後制御を介した不均一性の制御2020

    • Author(s)
      尾花 望
    • Organizer
      2020年度グラム陽性菌ゲノム機能会議
    • Related Report
      2020 Annual Research Report
  • [Presentation] 細菌が能動的に産生する多様な細胞外膜小胞2020

    • Author(s)
      尾花 望
    • Organizer
      第7回日本細胞外小胞学会
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] Temperature-dependent Type IV pili regulation via RNA processing2020

    • Author(s)
      尾花 望、中村幸治、野村暢彦
    • Organizer
      第93回日本細菌学会総会
    • Related Report
      2019 Research-status Report
  • [Presentation] Environmentally regulated cell fate shapes biofilm of Clostridium perfringens2019

    • Author(s)
      Nozomu Obana, Nobuhiko Nomura
    • Organizer
      Clostpath 11
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research
  • [Presentation] 微生物の集団形成による環境適応2019

    • Author(s)
      尾花 望
    • Organizer
      2018年度べん毛研究交流会
    • Related Report
      2018 Research-status Report
    • Invited
  • [Presentation] ウェルシュ菌のバイオフィルム中の役割分担2018

    • Author(s)
      尾花 望
    • Organizer
      細菌学若手コロッセウム in Okayama 2018
    • Related Report
      2018 Research-status Report
  • [Presentation] 嫌気性食中毒細菌集団中の役割分担2018

    • Author(s)
      尾花 望、田伏義彦、野村暢彦
    • Organizer
      第52回ビブリオシンポジウム
    • Related Report
      2018 Research-status Report
  • [Presentation] バイオフィルム(集団)形成が生み出す微生物活性2018

    • Author(s)
      尾花 望、野村暢彦
    • Organizer
      化学工学会第50回秋季大会
    • Related Report
      2018 Research-status Report
    • Invited

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Published: 2018-04-23   Modified: 2022-01-27  

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