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Development of a lipid asymmetry biosensor that dramatically facilitates studies on biomembranes

Research Project

Project/Area Number 18K19292
Research Category

Grant-in-Aid for Challenging Research (Exploratory)

Allocation TypeMulti-year Fund
Review Section Medium-sized Section 43:Biology at molecular to cellular levels, and related fields
Research InstitutionNagoya University

Principal Investigator

Kamura Takumi  名古屋大学, 理学研究科, 教授 (40333455)

Co-Investigator(Kenkyū-buntansha) 小原 圭介  名古屋大学, 理学研究科, 助教 (30419858)
Project Period (FY) 2018-06-29 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥6,240,000 (Direct Cost: ¥4,800,000、Indirect Cost: ¥1,440,000)
Fiscal Year 2019: ¥3,120,000 (Direct Cost: ¥2,400,000、Indirect Cost: ¥720,000)
Fiscal Year 2018: ¥3,120,000 (Direct Cost: ¥2,400,000、Indirect Cost: ¥720,000)
Keywords脂質非対称 / 細胞膜 / バイオセンサー / 生体膜、 / ストレス / 出芽酵母 / GFP / 膜動態
Outline of Final Research Achievements

In this study, we tried to develop a biosensor that can report the state of lipid asymmetry in the plasma membrane. For this purpose, we focused on and utilized a lipid asymmetry sensor protein Rim21 which we previously identified in yeast. As a result, we developed a prototype of lipid asymmetry biosensor that can visualize alterations in lipid asymmetry in living yeast cells. In addition, we conducted a systematic mutagenesis approach of the prototype biosensor, and succeeded in developing a series of improved biosensors with higher S/N ratio.
Using these biosensors, we monitored the state of lipid asymmetry in yeast cells exposed to environmental stresses. Interestingly, the state of lipid symmetry seemed to be altered under alkaline and salt stresses. Cells deleted for RIM21 were hypersensitive to alkaline and salt stresses, suggesting that these environmental stresses are sensed by Rim21 through alterations in the state of lipid asymmetry in the plasma membrane.

Academic Significance and Societal Importance of the Research Achievements

本研究で開発した脂質非対称バイオセンサーは遺伝子にコードされているため、増幅、保存、輸送などが簡便である。国内外の研究者のリクエストに応じることで、生体膜研究の分野に大きく貢献できる。
また、本研究では細胞外のpHや塩濃度などの物理化学変数の幾つかが、脂質非対称など細胞膜の物理化学的状態に変化をもたらし、その変化を細胞膜に存在するセンサータンパク質群が感知することを示唆した。細胞外の物理化学変数を細胞が感知する仕組みはほとんど明らかになっていないが、この様な新たな概念は、細胞のストレス受容機構の研究に大きなパラダイムシフトを起こす可能性を秘めている。

Report

(3 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Research-status Report
  • Research Products

    (6 results)

All 2020 2019 2018

All Journal Article (1 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 1 results,  Open Access: 1 results) Presentation (5 results) (of which Int'l Joint Research: 1 results)

  • [Journal Article] <i>N</i>-glycosylation of Rim21 at an Unconventional Site Fine-tunes Its Behavior in the Plasma Membrane2020

    • Author(s)
      Obara K, Kotani T, Nakatogawa H, Kihara A, Kamura T
    • Journal Title

      Cell Structure and Function

      Volume: 45 Issue: 1 Pages: 1-8

    • DOI

      10.1247/csf.19021

    • NAID

      130007784461

    • ISSN
      0386-7196, 1347-3700
    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] Development of a biosensor for the plasma membrane lipid asymmetry.2019

    • Author(s)
      Obara K, Yasuda A and Kamura T
    • Organizer
      29th International Conference on Yeast Genetics and Molecular Biology (ICYGMB)
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 細胞外刺激と細胞膜脂質非対称の関係性の解析2019

    • Author(s)
      安田有那、小原圭介、嘉村巧
    • Organizer
      第42回日本分子生物学会年会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 細胞膜脂質非対称バイオセンサーの開発2019

    • Author(s)
      小原圭介、安田有那、嘉村巧
    • Organizer
      第19回日本蛋白質学会年会・第71回日本細胞生物学会大会 合同年次大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 細胞膜脂質非対称バイオセンサーの開発2019

    • Author(s)
      小原圭介、安田有那、嘉村巧
    • Organizer
      第71回日本細胞生物学会大会
    • Related Report
      2018 Research-status Report
  • [Presentation] 細胞膜脂質非対称バイオセンサー開発の試み2018

    • Author(s)
      安田有那、小原圭介、嘉村巧
    • Organizer
      第41回日本分子生物学会年会
    • Related Report
      2018 Research-status Report

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Published: 2018-07-25   Modified: 2021-02-19  

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