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Toward a new understanding of acquired immune system via structural analysis of MHC-crossreative T cells

Research Project

Project/Area Number 18K19452
Research Category

Grant-in-Aid for Challenging Research (Exploratory)

Allocation TypeMulti-year Fund
Review Section Medium-sized Section 49:Pathology, infection/immunology, and related fields
Research InstitutionHiroshima University

Principal Investigator

ICHINOHE TATSUO  広島大学, 原爆放射線医科学研究所, 教授 (80314219)

Co-Investigator(Kenkyū-buntansha) 本庶 仁子  広島大学, 原爆放射線医科学研究所, 講師 (80614106)
Project Period (FY) 2018-06-29 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥6,240,000 (Direct Cost: ¥4,800,000、Indirect Cost: ¥1,440,000)
Fiscal Year 2019: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
Fiscal Year 2018: ¥3,510,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥810,000)
KeywordsT細胞受容体 / 立体構造 / 交差反応性 / 免疫シーケンシング / シングルセルゲノミクス / 主要組織適合性抗原複合体 / 網羅的免疫シークエンス / 共有クロノタイプ
Outline of Final Research Achievements

In this study, we accumulated approximately 2.3 million T-cell receptor (TCR) beta chain clonotypes from peripheral blood in recipients of allogeneic hematopoietic cell transplantation (HCT). Of these clonotypes, 42,436 (1.5%) were proven to be shared between different recipients. Notably, whole T-cell repertoires of post-HCT recipients were predominated by “shared TCR clonotypes” irrespective of donor-recipient HLA compatibility. As a good example, we also identified two HLA-B7-restricted CMV-reactive TCR clonotypes in the TCR repertoire of HLA-B7-negative recipients. Additionally for in toto analysis of T-cell reconstitution at the individual level, we have created an MHC-partially mismatched zebrafish HCT model and found that predominant TCR clonotypes in post-transplant recipients were substantially different from those in donor graft.

Academic Significance and Societal Importance of the Research Achievements

本研究を通じて得られた知見は、「共有TCR」がMHC交差的(crossreactive)に免疫学的優位性を保有する可能性を示唆するものであり、「単一レセプター単一抗原」に代わる獲得免疫系の新たな理解への道を開くものとして、学術的に重要な意義を有する。また、本研究で開発を行ったTCR遺伝子導入用の非ウイルスベクターはわが国独自の技術による遺伝子改変T細胞医薬品の開発に貢献し得る。

Report

(3 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Research-status Report
  • Research Products

    (18 results)

All 2020 2019 2018 Other

All Int'l Joint Research (2 results) Journal Article (1 results) (of which Peer Reviewed: 1 results) Presentation (14 results) (of which Int'l Joint Research: 3 results) Patent(Industrial Property Rights) (1 results)

  • [Int'l Joint Research] EigenBio LLC(米国)

    • Related Report
      2019 Annual Research Report
  • [Int'l Joint Research] iOgenetics Inc.(米国)

    • Related Report
      2018 Research-status Report
  • [Journal Article] 網羅的免疫シークエンス法の進歩と臨床医学への応用.2019

    • Author(s)
      一戸辰夫
    • Journal Title

      日本内科学会雑誌.

      Volume: 108 Pages: 2347-2355

    • NAID

      130007937599

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Presentation] 網羅的免疫シークエンシング法による同種造血細胞移植後の免疫再構築の解析.2020

    • Author(s)
      一戸辰夫
    • Organizer
      第53回日本無菌生物ノートバイオロジー学会総会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Longitudinal analysis of B cell repertoire after allogeneic HCT by comprehensive immunosequencing.2020

    • Author(s)
      Ichinohe T, Kawase T, Fujino K, Edahiro T, Toishigawa K, Mino T, Yoshida T, Nagoshi H, Fukushima N, Nakamura Y, Kitaura K, Shin-I T, Suzuki R, Homan JE, Bremel RD.
    • Organizer
      第42回日本造血細胞移植学会総会.
    • Related Report
      2019 Annual Research Report
  • [Presentation] TALENによるゲノム編集技術を用いた内在性TCR遺伝子のノックアウト及び目的遺伝子の導入.2020

    • Author(s)
      長谷川志穂, 川瀬孝和 , 吉田奈央, 小林美咲, 田辺季佐, 本庶仁子, 土石川佳世, 美山貴彦, 佐藤寛之, 鈴木隆二, 佐久間哲史, 山本 卓, 一戸辰夫.
    • Organizer
      第42回日本造血細胞移植学会総会.
    • Related Report
      2019 Annual Research Report
  • [Presentation] Haplotype characterization of novel major histocompatibility complex U genes in zebrafish.2019

    • Author(s)
      Honjo Y, Ichinohe T.
    • Organizer
      London Calling Nanopore Meeting
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Platinum TALEN-mediated non-viral T cell receptor gene knock-in facilitates universal T cell genome editing for manufacturing of therapeutic immune cells.2019

    • Author(s)
      Honjo Y, Kawase T, Miyama T, Sato H, Suzuki R, Sakuma T, Yamamoto T, Ichinohe T.
    • Organizer
      The 24th Congress of the European Hematology Association
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 造血幹細胞移植におけるHLA関連検査の進歩.2019

    • Author(s)
      一戸辰夫
    • Organizer
      第67回日本輸血・細胞治療学会学術総会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 高い自己複製能とメモリー機能を持つ新たなT細胞サブセットの網羅的T細胞受容体(TCR)解析.2019

    • Author(s)
      川瀬孝和, 吉田奈央, 田辺季佐, 小林美咲, 長谷川七穂, 北浦一孝, 鈴木隆二, 一戸辰夫.
    • Organizer
      第28回日本組織適合性学会大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 網羅的免疫シークエンスによる造血細胞移植後の免疫再構築の解析.2019

    • Author(s)
      一戸辰夫
    • Organizer
      第28回日本組織適合性学会大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] より安全なT細胞免疫療法を目指した遺伝子改変T細胞の作成.2019

    • Author(s)
      川瀬孝和, 本庶仁子, 土石川佳世, 美山貴彦, 佐藤寛之, 鈴木隆二, 佐久間哲史, 山本 卓, 一戸辰夫.
    • Organizer
      第81回日本血液学会学術集会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 網羅的免疫シーケンシングによる同種造血細胞移植後のT細胞多様性再構築の解析.2019

    • Author(s)
      一戸辰夫, 本庶仁子, 福島伯泰.
    • Organizer
      第52回日本無菌生物ノートバイオロジー学会
    • Related Report
      2018 Research-status Report
  • [Presentation] Mapping of immunoglobulin T-cell exposed motifs during B cell reconstitution after allogeneic HCT.2019

    • Author(s)
      一戸辰夫, Robert D. Bremel, 北浦一孝, 中村征史, 川瀬孝和, 美山貴彦, 本庶仁子, 新井 理, 鈴木隆二, E. Jane Homan.
    • Organizer
      第41回日本造血細胞移植学会総会
    • Related Report
      2018 Research-status Report
  • [Presentation] Characterization of novel major histocompatibility complex genes in zebrafish.2018

    • Author(s)
      Honjo Y, Ichinohe T.
    • Organizer
      Nanopore community meeting 2018
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] In-depth immunosequencing of human stem memory T cell repertoire and its comparison with other memory T cell populations.2018

    • Author(s)
      川瀬孝和, 田辺季佐, 美山貴彦, 本庶仁子, 山下和男, 北浦一孝, 鈴木隆二, 一戸辰夫.
    • Organizer
      第22回日本がん免疫学会総会
    • Related Report
      2018 Research-status Report
  • [Presentation] Comprehensive T cell receptor (TCR) repertoire analysis of new T cell subsets with naive phenotype.2018

    • Author(s)
      Kisa Tanabe, Takakazu Kawase, Kazutaka Kitaura, Takahiko Miyama, Misaki Kobayashi, Mayu Sato, Takayuki Oda, Aoi Sakamoto, Kiyoto Tanaka, Kiyotaka Kuzushima, Kazuo Yamashita, Tadasu Shin-I, Ryuji Suzuki, Tatsuo Ichinohe.
    • Organizer
      第80回日本血液学会学術集会
    • Related Report
      2018 Research-status Report
  • [Patent(Industrial Property Rights)] 抗原特異的受容体遺伝子を環状DNAを用いてT細胞ゲノムに導入する方法2019

    • Inventor(s)
      一戸辰夫、山本卓、佐久間哲史、本庶仁子、他5名
    • Industrial Property Rights Holder
      一戸辰夫、山本卓、佐久間哲史、本庶仁子、他5名
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2019-206448
    • Filing Date
      2019
    • Related Report
      2019 Annual Research Report

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Published: 2018-07-25   Modified: 2024-01-30  

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