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Investigation of neo-self antigens derived from proteins with post-translational modification

Research Project

Project/Area Number 18K19485
Research Category

Grant-in-Aid for Challenging Research (Exploratory)

Allocation TypeMulti-year Fund
Review Section Medium-sized Section 50:Oncology and related fields
Research InstitutionJapanese Foundation for Cancer Research

Principal Investigator

Kiyotani Kazuma  公益財団法人がん研究会, がんプレシジョン医療研究センター 免疫ゲノム医療開発プロジェクト, 主任研究員 (30433642)

Project Period (FY) 2018-06-29 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥6,240,000 (Direct Cost: ¥4,800,000、Indirect Cost: ¥1,440,000)
Fiscal Year 2019: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Fiscal Year 2018: ¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Keywords翻訳後修飾 / ネオセルフ抗原 / T細胞受容体 / ネオアンチゲン / LC-MS/MS
Outline of Final Research Achievements

In this study, we investigated whether neo-self peptides derived from mutilated proteins encoded by oncogenes. We generated all possible peptides with methylated amino acid using bioinformatic approach and predicted their binding affinities to HLA class I molecules. Through the analysis, we obtained two possible candidates of methylated proteins which can be presented on HLA molecules. From HLA-matched healthy donor’s blood sample, we successfully induced methylated peptide-specific T cells for one of them. We also identified the TCRalpha/beta sequences of the T cells, and generated TCR-engineered T cells.

Academic Significance and Societal Importance of the Research Achievements

本研究では、翻訳後修飾(特にメチル化)を受けたタンパク質由来の抗原がT細胞の標的となりうるかを検証した。これまでに翻訳後修飾を受けたペプチドがHLA上に提示されていることは報告されていた。本研究では、実際に初めて翻訳後修飾を受けたペプチドを特異的に認識するT細胞の同定に成功した。本研究の成果は、学術的にも、また新たながん免疫療法の標的としても大変重要な成果である。

Report

(3 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Research-status Report
  • Research Products

    (23 results)

All 2020 2019 2018

All Journal Article (12 results) (of which Int'l Joint Research: 12 results,  Peer Reviewed: 12 results,  Open Access: 5 results) Presentation (11 results) (of which Int'l Joint Research: 2 results,  Invited: 1 results)

  • [Journal Article] Cooperation of genes in HPV16 E6/E7-dependent cervicovaginal carcinogenesis trackable by endoscopy and independent of exogenous estrogens or carcinogens2020

    • Author(s)
      Paula Bottinger, Kiyotani Kazuma, et al.
    • Journal Title

      Carcinogenesis

      Volume: . Issue: 11 Pages: 1605-1615

    • DOI

      10.1093/carcin/bgaa027

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Impact of TCR Diversity on the Development of Transplanted or Chemically Induced Tumors2019

    • Author(s)
      Schreiber K, Karrison G, Wolf SP, Kiyotani K, Steiner M, Littmann ER, Pamer EG, Kammertoens T, Schreiber H, Leisegang M.
    • Journal Title

      Cancer Immunology Research

      Volume: 8 Issue: 2 Pages: 192-202

    • DOI

      10.1158/2326-6066.cir-19-0567

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Diagnostic utility of STAT6YE361 expression in classical Hodgkin lymphoma and related entities2019

    • Author(s)
      Slambrouck CV, Huh J, Suh C, Song JY, Menon MP, Sohani AR, Duffield AS, Goldberg RC, Dama P, Kiyotani K, Godfrey J, Fitzpatrick C, Kline J, Smith SM, Jaffe ES, Hartmann S, Venkataraman G.
    • Journal Title

      Modern Pathology

      Volume: 33 Issue: 5 Pages: 834-845

    • DOI

      10.1038/s41379-019-0428-0

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Tamoxifen Metabolism and Breast Cancer Recurrence: A Question Unanswered by CYPTAM2019

    • Author(s)
      Goetz MP, Suman VJ, Nakamura Y, Kiyotani K, Jordan VC, Ingle JN.
    • Journal Title

      Journal of Clinical Oncology

      Volume: 37 Issue: 22 Pages: 1982-1983

    • DOI

      10.1200/jco.19.00504

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Secreted PD-L1 variants mediate resistance to PD-L1 blockade therapy in non-small cell lung cancer2019

    • Author(s)
      Gong Bo, Kiyotani Kazuma, Sakata Seiji, Nagano Seiji, Kumehara Shun, Baba Satoko, Besse Benjamin, Yanagitani Noriko, Friboulet Luc, Nishio Makoto, Takeuchi Kengo, Kawamoto Hiroshi, Fujita Naoya, Katayama Ryohei
    • Journal Title

      The Journal of Experimental Medicine

      Volume: 216 Issue: 4 Pages: 982-1000

    • DOI

      10.1084/jem.20180870

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] TCR sequencing analysis of cancer tissues and tumor draining lymph nodes in colorectal cancer patients.2019

    • Author(s)
      Tatsuo Matsuda, Eisaku Miyauchi, Yu-Wen Hsu, Satoshi Nagayama, Kazuma Kiyotani, Makda Zewde, Jae-Hyun Park, Taigo Kato, Makiko Harada, Shimpei Matsui, Masashi Ueno, Kazumasa Fukuda, Nobuaki Suzuki, Shoichi Hazama, Hiroaki Nagano, Hiroya Takeuchi, Wickii T. Vigneswaran, Yuko Kitagawa, Yusuke Nakamura
    • Journal Title

      OncoImmunology

      Volume: 8

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Identification of neoantigen-specific T cells and their targets: implications for immunotherapy of head and neck squamous cell carcinoma2019

    • Author(s)
      Ren Lili、Leisegang Matthias、Deng Boya、Matsuda Tatsuo、Kiyotani Kazuma、Kato Taigo、Harada Makiko、Park Jae-Hyun、Saloura Vassiliki、Seiwert Tanguy、Vokes Everett、Agrawal Nishant、Nakamura Yusuke
    • Journal Title

      OncoImmunology

      Volume: 8 Issue: 4 Pages: e1568813-e1568813

    • DOI

      10.1080/2162402x.2019.1568813

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Significant differences in T cell receptor repertoires in lung adenocarcinomas with and without epidermal growth factor receptor mutations2019

    • Author(s)
      Miyauchi Eisaku、Matsuda Tatsuo、Kiyotani Kazuma、Low Siew-Kee、Hsu Yu-Wen、Tsukita Yoko、Ichinose Masakazu、Sakurada Akira、Okada Yoshinori、Saito Ryoko、Nakamura Yusuke
    • Journal Title

      Cancer Science

      Volume: 110 Issue: 3 Pages: 867-874

    • DOI

      10.1111/cas.13919

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] The era of immunogenomics/immunopharmacogenomics2018

    • Author(s)
      Zewde Makda、Kiyotani Kazuma、Park Jae-Hyun、Fang Hua、Yap Kai Lee、Yew Poh Yin、Alachkar Houda、Kato Taigo、Mai Tu H.、Ikeda Yuji、Matsuda Tatsuo、Liu Xiao、Ren Lili、Deng Boya、Harada Makiko、Nakamura Yusuke
    • Journal Title

      Journal of Human Genetics

      Volume: 63 Issue: 8 Pages: 865-875

    • DOI

      10.1038/s10038-018-0468-1

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Immunoglobulin profiling identifies unique signatures in patients with Kawasaki disease during intravenous immunoglobulin treatment2018

    • Author(s)
      Ko Tai-Ming、Kiyotani Kazuma、Chang Jeng-Sheng、Park Jae-Hyun、Yin Yew Poh、Chen Yuan-Tsong、Wu Jer-Yuarn、Nakamura Yusuke
    • Journal Title

      Human Molecular Genetics

      Volume: 27 Issue: 15 Pages: 2671-2677

    • DOI

      10.1093/hmg/ddy176

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] A pilot study of durvalumab and tremelimumab and immunogenomic dynamics in metastatic breast cancer2018

    • Author(s)
      Santa-Maria Cesar August、Kato Taigo、Park Jae-Hyun、Kiyotani Kazuma、Rademaker Alfred、Shah Ami N.、Gross Leeaht、Blanco Luis Z.、Jain Sarika、Flaum Lisa、Tellez Claudia、Stein Regina、Uthe Regina、Gradishar William J.、Cristofanilli Massimo、Nakamura Yusuke、Giles Francis J.
    • Journal Title

      Oncotarget

      Volume: 9 Issue: 27 Pages: 18985-18996

    • DOI

      10.18632/oncotarget.24867

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Induction of Neoantigen-Specific Cytotoxic T Cells and Construction of T-cell Receptor?Engineered T Cells for Ovarian Cancer2018

    • Author(s)
      Matsuda Tatsuo、Leisegang Matthias、Park Jae-Hyun、Ren Lili、Kato Taigo、Ikeda Yuji、Harada Makiko、Kiyotani Kazuma、Lengyel Ernst、Fleming Gini F.、Nakamura Yusuke
    • Journal Title

      Clinical Cancer Research

      Volume: 24 Issue: 21 Pages: 5357-5367

    • DOI

      10.1158/1078-0432.ccr-18-0142

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Presentation] Comparison of TCR repertoires between cancer tissues and lymph nodes in colorectal cancer patients.2019

    • Author(s)
      Kiyotani K, Matsuda T, Miyauchi E, Hsu Y, Nagayama S, Zewde M, Park JH, Kato T, Harada M, Suzuki N, Nagano H, Hazama S, Nakamura Y.
    • Organizer
      AACR Annual Meeting 2019
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Identification of cancer-reactive/neoantigen-specific T cells in peripheral blood and tumor tissues of cancer patients.2019

    • Author(s)
      Kiyotani K
    • Organizer
      6th Annual Meeting of Colegio Mexicano para la Investigacion del Cancer
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Progress and future of cancer immunotherapy2019

    • Author(s)
      Kiyotani K
    • Organizer
      第78回日本癌学会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Screening of cancer-reactive/neoantigen-specific T cells in peripheral blood and tumor tissues of cancer patients.2019

    • Author(s)
      Kiyotani K, Nakamura Y.
    • Organizer
      第78回日本癌学会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Secreted PD-L1 variants caused by aberrant splicing mediate antiPD-L1 antibody resistance.2019

    • Author(s)
      Gong B, Kiyotani K, Sakata S, Nishio M, Takeuchi K, Kawamoto H, Fujita N, Katayama R.
    • Organizer
      第78回日本癌学会
    • Related Report
      2019 Annual Research Report
  • [Presentation] TCR repertoires in lung adenocarcinomas with and without EGFR mutation.2019

    • Author(s)
      Miyauchi E, Matsuda T, Kiyotani K, Low SK, Tsukita Y, Ichinose M, Sakurada A, Okada Y, Saito R, Nakamura Y.
    • Organizer
      第78回日本癌学会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Clinical significance of clonal hematopoiesis in the interpretation of blood liquid biopsy.2019

    • Author(s)
      Chan HT, Nagayama S, Chin YM, Hayashi R, Kiyotani K, Nakamura Y, Low SK.
    • Organizer
      第78回日本癌学会
    • Related Report
      2019 Annual Research Report
  • [Presentation] NGSデータからのネオアンチゲン予測アルゴリズム開発および特異的T細胞の誘導2018

    • Author(s)
      清谷一馬
    • Organizer
      第31回日本バイオセラピィ学会学術集会総会
    • Related Report
      2018 Research-status Report
  • [Presentation] TCR sequencing analysis of cancer tissues and lymph nodes in colorectal cancer patients2018

    • Author(s)
      Kiyotani K, Matsuda T, Nagayama S, Miyauchi E, Hsu Y, Zewde M, Park JH, Kato T, Harada M, Suzuki N, Nagano H, Hazama S, Nakamura Y
    • Organizer
      第77回日本癌学会
    • Related Report
      2018 Research-status Report
  • [Presentation] Establishment of T-cell receptor-engineered T cells: Inplications for head and neck squemous carcinoma2018

    • Author(s)
      Ren L, Matsuda T, Deng B, Kiyotani K, Kato T, Park JH, Agrawal N, Nakamura Y
    • Organizer
      第77回日本癌学会
    • Related Report
      2018 Research-status Report
  • [Presentation] T cell receptor repertoire analysis of lung adenocarcinoma harboring EGFR mutations2018

    • Author(s)
      Miyauchi E, Matsuda T, Hsu Y, Tsukita Y, Ichinose M, Sakurada A, Okada Y, Saito R, Kiyotani K, Nakamura Y
    • Organizer
      第77回日本癌学会
    • Related Report
      2018 Research-status Report

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Published: 2018-07-25   Modified: 2021-12-27  

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