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Semi-exhaustive functional screening of cell-cell interaction factors in human iPSC mini-liver

Research Project

Project/Area Number 18K19589
Research Category

Grant-in-Aid for Challenging Research (Exploratory)

Allocation TypeMulti-year Fund
Review Section Medium-sized Section 55:Surgery of the organs maintaining homeostasis and related fields
Research InstitutionThe University of Tokyo (2019)
Yokohama City University (2018)

Principal Investigator

Sekine Keisuke  東京大学, 医科学研究所, 准教授 (00323569)

Project Period (FY) 2018-06-29 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥6,240,000 (Direct Cost: ¥4,800,000、Indirect Cost: ¥1,440,000)
Fiscal Year 2019: ¥3,120,000 (Direct Cost: ¥2,400,000、Indirect Cost: ¥720,000)
Fiscal Year 2018: ¥3,120,000 (Direct Cost: ¥2,400,000、Indirect Cost: ¥720,000)
KeywordsiPS細胞 / オルガノイド / シングルセルRNAシークエンス / 肝臓 / シングルセルゲノミクス
Outline of Final Research Achievements

In this study, we constructed an efficient functional screening system for human iPSC mini-liver using CRISPR / CAS9 method. In order to efficiently carry out gene deletion, iCrispr-iPS cells in which a gene capable of inducing Cas9 expression by addition of doxycycline was introduced into the AAVS1 locus of human iPS cells by homologous recombination were established for a several iPSC lines. We performed a functional analysis using knockout iPSCs of genes that are thought to be involved in the residual undifferentiated cells in differentiated cell products, and succeeded in identifying the factors involved in the predisposed to remain the undifferentiated cells in differentiated cell products. In addition, we made several knockout iPSCs for urea cycle-related genes, which are also the cause of urea cycle abnormality, and performed functional verification.

Academic Significance and Societal Importance of the Research Achievements

本研究ではiPSCを用いて極めて効率よく遺伝子欠損細胞を作製し機能検証する手法を確立した。この技術を用いて、移植医療に用いる再生医療等製品における安全性の確保において極めて重要な未分化iPSCの残存に関わる因子を同定した。また、先天的な代謝性疾患の原因でもある尿素サイクル関連遺伝子について複数のノックアウトiPSCを作製し、尿素サイクルのそれぞれの酵素欠損によってバイパスされる代謝経路が異なる可能性が示唆された。今後、尿素サイクルに異常症に対する薬剤療法や代謝改善のための検証が可能になると期待される。以上のことから、本手法を用いることで様々な細胞における効率よい遺伝子機能の検証が期待される。

Report

(3 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Research-status Report
  • Research Products

    (26 results)

All 2020 2019 2018 Other

All Int'l Joint Research (2 results) Journal Article (4 results) (of which Int'l Joint Research: 4 results,  Peer Reviewed: 4 results,  Open Access: 4 results) Presentation (8 results) (of which Int'l Joint Research: 3 results,  Invited: 8 results) Book (1 results) Patent(Industrial Property Rights) (11 results) (of which Overseas: 4 results)

  • [Int'l Joint Research] マックスプランク進化人類学研究所(ドイツ)

    • Related Report
      2018 Research-status Report
  • [Int'l Joint Research] IOB/ETH Zurich(スイス)

    • Related Report
      2018 Research-status Report
  • [Journal Article] Self-Condensation Culture Enables Vascularization of Tissue Fragments for Efficient Therapeutic2018

    • Author(s)
      Yoshinobu Takahashi, Keisuke Sekine, Tatsuya Kin, Takanori Takebe, Hideki Taniguchi
    • Journal Title

      Cell Reports

      Volume: 6 Issue: 6 Pages: 1620-1629

    • DOI

      10.1016/j.celrep.2018.03.123

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Optimal Hypoxia Regulates Human iPSC-Derived Liver Bud Differentiation through Intercellular TGFB Signaling2018

    • Author(s)
      Ayabe Hiroaki、Anada Takahisa、Kamoya Takuo、Sato Tomoya、Kimura Masaki、Yoshizawa Emi、Kikuchi Shunyuu、Ueno Yasuharu、Sekine Keisuke、Camp J. Gray、Treutlein Barbara、Ferguson Autumn、Suzuki Osamu、Takebe Takanori、Taniguchi Hideki
    • Journal Title

      Stem Cell Reports

      Volume: 11 Issue: 2 Pages: 306-316

    • DOI

      10.1016/j.stemcr.2018.06.015

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Recapitulation of hepatitis B virus?host interactions in liver organoids from human induced pluripotent stem cells2018

    • Author(s)
      Nie Yun-Zhong、Zheng Yun-Wen、Miyakawa Kei、Murata Soichiro、Zhang Ran-Ran、Sekine Keisuke、Ueno Yasuharu、Takebe Takanori、Wakita Takaji、Ryo Akihide、Taniguchi Hideki
    • Journal Title

      EBioMedicine

      Volume: 35 Pages: 114-123

    • DOI

      10.1016/j.ebiom.2018.08.014

    • NAID

      120007128498

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Human iPSC-Derived Posterior Gut Progenitors Are Expandable and Capable of Forming Gut and Liver Organoids.2018

    • Author(s)
      Zhang R-R, Koido M, Tadokoro T, Ouchi R, Matsuno T, Ueno Y, Sekine K, Takebe T*, Taniguch H
    • Journal Title

      Stem Cell Reports

      Volume: 10 Issue: 3 Pages: 780-793

    • DOI

      10.1016/j.stemcr.2018.01.006

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] Generation of human liver using iPS cells for regenerative therapies2019

    • Author(s)
      Keisuke Sekine
    • Organizer
      American Association for the Study of Liver Diseases(AASLD)
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Generation of functional human liver from pluripotent stem cell.2019

    • Author(s)
      Keisuke Sekine
    • Organizer
      26th East Asia Joint Symposium on Biomedical Research
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Multicellular cancer organoid cultures for recapitulating cancer ecosystems2019

    • Author(s)
      Keisuke Sekine
    • Organizer
      The 78th Annual Meeting of the Japanese Cancer Association
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Recapitulating pancreatic cancer ecosystems by multicellular cancer organoid cultures based on patient-derived cancer cells2019

    • Author(s)
      関根圭輔
    • Organizer
      患者由来がんモデル
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Generation of three-dimensional cancer tissue using patient-derived pancreatic cancer cells2019

    • Author(s)
      Keisuke Sekine
    • Organizer
      Asia-Pacific Scientific Workshop
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] 再生医療応用へ向けたiPSC肝芽製造技術の開発2018

    • Author(s)
      関根圭輔
    • Organizer
      幹細胞の培養法・培養工学のためのコンソーシアム 第三回シンポジウム
    • Related Report
      2018 Research-status Report
    • Invited
  • [Presentation] ヒト組織三次元的再構成技術を用いたヒューマンバイオロジーの解析2018

    • Author(s)
      関根圭輔
    • Organizer
      第11回Symphony
    • Related Report
      2018 Research-status Report
    • Invited
  • [Presentation] 患者由来膵癌細胞を用いた三次元的癌組織の人為的創出2018

    • Author(s)
      関根圭輔
    • Organizer
      講演会:新しい治療法の開発を目指す患者由来がんモデル
    • Related Report
      2018 Research-status Report
    • Invited
  • [Book] 患者由来がんモデルを用いたがん研究実践ガイド、佐々木博己/編2019

    • Author(s)
      関根圭輔
    • Total Pages
      294
    • Publisher
      羊土社
    • ISBN
      9784758122429
    • Related Report
      2019 Annual Research Report
  • [Patent(Industrial Property Rights)] 未分化細胞の分化抵抗性評価法2020

    • Inventor(s)
      関根圭輔、谷口英樹
    • Industrial Property Rights Holder
      関根圭輔、谷口英樹
    • Industrial Property Rights Type
      特許
    • Filing Date
      2020
    • Related Report
      2019 Annual Research Report
    • Overseas
  • [Patent(Industrial Property Rights)] 多能性幹細胞からの立体臓器の構築2020

    • Inventor(s)
      谷口英樹、武部貴 則、関根圭輔
    • Industrial Property Rights Holder
      谷口英樹、武部貴 則、関根圭輔
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2019-557347
    • Filing Date
      2020
    • Related Report
      2019 Annual Research Report
  • [Patent(Industrial Property Rights)] 再構成癌組織を用いた薬剤評価方法2019

    • Inventor(s)
      関根圭輔、谷口英樹、上野康晴、奥田諒、森永聡一郎、宮城洋平
    • Industrial Property Rights Holder
      関根圭輔、谷口英樹、上野康晴、奥田諒、森永聡一郎、宮城洋平
    • Industrial Property Rights Type
      特許
    • Filing Date
      2019
    • Related Report
      2019 Annual Research Report
    • Overseas
  • [Patent(Industrial Property Rights)] 上皮間葉転換関連分子を用いた癌評価法2019

    • Inventor(s)
      関根圭輔、谷口英樹、上野康晴、奥田諒、森永聡一郎、宮城洋平
    • Industrial Property Rights Holder
      関根圭輔、谷口英樹、上野康晴、奥田諒、森永聡一郎、宮城洋平
    • Industrial Property Rights Type
      特許
    • Filing Date
      2019
    • Related Report
      2019 Annual Research Report
    • Overseas
  • [Patent(Industrial Property Rights)] 未分化細胞検出法2019

    • Inventor(s)
      関根圭輔、谷口英樹、安居良太
    • Industrial Property Rights Holder
      関根圭輔、谷口英樹、安居良太
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2019-207002
    • Filing Date
      2019
    • Related Report
      2019 Annual Research Report
  • [Patent(Industrial Property Rights)] 未分化マーカー遺伝子高感度検出法2019

    • Inventor(s)
      関根圭輔、谷口英樹、安居良太、松井貴香
    • Industrial Property Rights Holder
      関根圭輔、谷口英樹、安居良太、松井貴香
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2019-207004
    • Filing Date
      2019
    • Related Report
      2019 Annual Research Report
  • [Patent(Industrial Property Rights)] 未分化細胞検出法2019

    • Inventor(s)
      関根圭輔、谷口英樹
    • Industrial Property Rights Holder
      関根圭輔、谷口英樹
    • Industrial Property Rights Type
      特許
    • Filing Date
      2019
    • Related Report
      2019 Annual Research Report
    • Overseas
  • [Patent(Industrial Property Rights)] 未分化細胞の分化抵抗性評価法2019

    • Inventor(s)
      関根圭輔、谷口英樹
    • Industrial Property Rights Holder
      関根圭輔、谷口英樹
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2019-005892
    • Filing Date
      2019
    • Related Report
      2018 Research-status Report
  • [Patent(Industrial Property Rights)] 未分化細胞検出法2018

    • Inventor(s)
      関根圭輔、谷口英樹
    • Industrial Property Rights Holder
      関根圭輔、谷口英樹
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2018-115025
    • Filing Date
      2018
    • Related Report
      2018 Research-status Report
  • [Patent(Industrial Property Rights)] 上皮間葉転換関連分子を用いた癌評価法2018

    • Inventor(s)
      関根圭輔、谷口英 樹、上野康晴、奥田 諒、森永聡一郎、宮城洋平
    • Industrial Property Rights Holder
      関根圭輔、谷口英 樹、上野康晴、奥田 諒、森永聡一郎、宮城洋平
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2018-080581
    • Filing Date
      2018
    • Related Report
      2018 Research-status Report
  • [Patent(Industrial Property Rights)] 再構成癌組織を用いた薬剤評価方法2018

    • Inventor(s)
      関根圭輔、谷口英 樹、上野康晴、奥田 諒、森永聡一郎、宮城洋平
    • Industrial Property Rights Holder
      関根圭輔、谷口英 樹、上野康晴、奥田 諒、森永聡一郎、宮城洋平
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2018-080585
    • Filing Date
      2018
    • Related Report
      2018 Research-status Report

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Published: 2018-07-25   Modified: 2021-02-19  

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