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Theory and Practice of Data Visualization for Modeling Complex Large Scale Data

Research Project

Project/Area Number 19300097
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Statistical science
Research InstitutionKeio University

Principal Investigator

SHIBATA Ritei  慶應義塾大学, 理工学部, 教授 (60089828)

Co-Investigator(Kenkyū-buntansha) 横内 大介  一橋大学, 国際企業戦略研究科, 講師 (50407144)
Co-Investigator(Renkei-kenkyūsha) DAISUKE Yokouchi  一橋大学, 国際企業戦略研究科, 講師 (50407144)
Project Period (FY) 2007 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥10,790,000 (Direct Cost: ¥8,300,000、Indirect Cost: ¥2,490,000)
Fiscal Year 2010: ¥2,600,000 (Direct Cost: ¥2,000,000、Indirect Cost: ¥600,000)
Fiscal Year 2009: ¥2,600,000 (Direct Cost: ¥2,000,000、Indirect Cost: ¥600,000)
Fiscal Year 2008: ¥2,600,000 (Direct Cost: ¥2,000,000、Indirect Cost: ¥600,000)
Fiscal Year 2007: ¥2,990,000 (Direct Cost: ¥2,300,000、Indirect Cost: ¥690,000)
Keywordsデータヴィジュアリゼーション / Textile Plot / 大規模複雑データ / モデリング / 高次元データ / 大規模データ / 視覚化 / モデル化 / 海洋生物 / ヘッジファンド / DNAシークエンス / 適合度 / データの可視化 / 超高次元 / ゲノム解析 / 条件付きQQプロット / アバンダンス / データの変容 / JAVA / 複雑データ / 非線形変換の発見 / Parallel Coordinate Plot
Research Abstract

The aim of this project is to validate the effectiveness of data visualization technique like Textile Plot for analysis of large complex data to find out new aspects of underlying phenomena and result in a better modeling. The project has been conducted through real application to real problems. Three application fields are taken into account in this project, genome analysis, financial data analysis and marine survey analysis. It has been shown that Textile Plot is a quite powerful tool in finding new genomes compared with a traditional way of visualization LD Display. We have developed a new algorithm to be able to deal with super high, for example several million dimensional data, which is common in genome analysis. In the field of finance, it is shown that Textile Plot is a powerful tool in describing difference of hedge fund operations as well as FX rates. We have conducted cooperative research works with Commonwealth Science and Industry Research Organisation in the field of marine survey data analysis. We could find several interesting aspects of the effect of environmental changes to seabed or estuary fauna by using Textile Plot together with PP plots. It led us to develop a new distributional modeling of the weight and number of such animals, as a stationary distribution of a stochastic difference equation for the growth.

Report

(6 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report   Self-evaluation Report ( PDF )
  • 2008 Annual Research Report
  • 2007 Annual Research Report
  • Research Products

    (49 results)

All 2011 2010 2009 2008 2007 Other

All Journal Article (17 results) (of which Peer Reviewed: 17 results) Presentation (27 results) Remarks (5 results)

  • [Journal Article] Exploration of the disease locus by a careful evaluation of the likelihood polynomial for pedigree data2011

    • Author(s)
      Y. Sugaya and R. Shibata
    • Journal Title

      Pournal of Human Genetics

      Volume: 56 Pages: 383-389

    • NAID

      10030659388

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Exploration of the disease locus by a careful evaluation of the likelihood polynomial for pedigree data2011

    • Author(s)
      Yuki Sugaya, Ritei Shibata
    • Journal Title

      Journal of Human Genetics

      Volume: 56 Pages: 383-389

    • NAID

      10030659388

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A Note on Statistical Models for Individual Hedge Fund Returns2009

    • Author(s)
      R. Miura, Y. Aoki and D. Yokouchi
    • Journal Title

      Mathematical Methods of Operations Research

      Volume: 69 Pages: 553-557

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] A Note on Statistical Models for Individual Hedge Fund Returns.2009

    • Author(s)
      R. Mura, Y. Aoki, D. Yokouchi
    • Journal Title

      Mathematical Methods of Operations Research 69

      Pages: 553-557

    • Related Report
      2009 Self-evaluation Report
    • Peer Reviewed
  • [Journal Article] A Note on Statistical Models for Individual Hedge Fund Returns2009

    • Author(s)
      R.Miura, Y.Aoki, D.Yokouchi
    • Journal Title

      Mathematical Methods of Operations Research 69

      Pages: 553-557

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] High Dimensional Data Visualisation : the Textile Plot2008

    • Author(s)
      N. Kumasaka and R. Shibata
    • Journal Title

      Computational Statistics and Data Analysis

      Volume: 52 Pages: 3636-3644

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Modelling Swimmer' Speeds Over the Course of a Race2008

    • Author(s)
      H. Shimadzu, R. Shibata and Y. Ohgi
    • Journal Title

      J. Biomechanics

      Volume: 41 Pages: 549-555

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] High Dimensional Data Visualisation: the Textile Plot.2008

    • Author(s)
      N. Kumasaka, R. Shibata
    • Journal Title

      Computational Statistics and Data Analysis 52

      Pages: 3636-3644

    • Related Report
      2009 Self-evaluation Report
    • Peer Reviewed
  • [Journal Article] Modelling Swimmer' Speeds Over the Course of a Race.2008

    • Author(s)
      H. Simadzu, R. Sibata, Y. Ogi
    • Journal Title

      J.Biomechanics 41

      Pages: 549-555

    • Related Report
      2009 Self-evaluation Report
    • Peer Reviewed
  • [Journal Article] Modelling Swimmers' Speeds over the Course of a Race2008

    • Author(s)
      H. Shimadzu, R. Shibata, Y. Ohgi
    • Journal Title

      Journal of Biomechanics 41

      Pages: 549-555

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] High Dimensional Data Visualisation : the Textile Plot2008

    • Author(s)
      N. Kumasaka, R. Shibata
    • Journal Title

      Computational Statistics and Data Analysis 52

      Pages: 3616-3644

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Modelling Swimmers'Sppeds over the Course of a Race2008

    • Author(s)
      H. Shimadzu, R. Shibata and Y. Ohgi
    • Journal Title

      J.Biomechanics 41

      Pages: 549-555

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] High Dimensional Data Visualisation:the Textile Plot2008

    • Author(s)
      N. Kumasaka and R. Shibata
    • Journal Title

      Computational Statistics and Data Analysis 52

      Pages: 3616-3644

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Textile Plot環境2007

    • Author(s)
      熊坂夏彦, 柴田里程
    • Journal Title

      統計数理

      Volume: 55 Pages: 47-98

    • NAID

      120006019033

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Characteristic Features of Japanese Women's Hair With Aging and With Progressing Hair Loss2007

    • Author(s)
      M. Tajima, C. Hamada, T. Arai, M. Miyazawa, R. Shibata and A. I. Shino
    • Journal Title

      J. Dermatological Science

      Volume: 45 Pages: 93-101

    • NAID

      10024115214

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Characteristic features of Japanese women;s hair with aging and with progressing hair loss2007

    • Author(s)
      M. Tajima, C. Hamada, T. Arai, M. Miyazawa, R. Shibata and A. Ishino.
    • Journal Title

      Journal of Dermatological Science 45

      Pages: 93-101

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Texttile Plot環境2007

    • Author(s)
      熊坂 夏彦, 柴田 里程
    • Journal Title

      統計数理 55

      Pages: 47-68

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Presentation] Approximation of Cramer-von Mises test statistics by weighted sum of chi-square variables2011

    • Author(s)
      M. Naka and R. Shibata
    • Organizer
      Workshop on Asymptotic Methods in Data Science
    • Place of Presentation
      慶應義塾大学矢上キャンパス
    • Year and Date
      2011-12-08
    • Related Report
      2010 Final Research Report
  • [Presentation] Approximation of Cramer-von Mises test statistics by weighted sum of chi-square variables2011

    • Author(s)
      Mayumi Naka, Ritei Shibata
    • Organizer
      Workshop on Asymptotic Methods in Data Science
    • Place of Presentation
      慶應義塾大学
    • Year and Date
      2011-12-08
    • Related Report
      2010 Annual Research Report
  • [Presentation] Asymptotics of spatial AR parameter estimation2011

    • Author(s)
      Y. Takei and R. Shibata
    • Organizer
      Workshop on Asymptotic Methods in Data Science
    • Place of Presentation
      慶應義塾大学矢上キャンパス
    • Year and Date
      2011-12-06
    • Related Report
      2010 Final Research Report
  • [Presentation] Asymptotics of spatial AR parameter estimation2011

    • Author(s)
      Yuki Takei, Ritei Shibata
    • Organizer
      Workshop on Asymptotic Methods in Data Science
    • Place of Presentation
      慶應義塾大学
    • Year and Date
      2011-12-06
    • Related Report
      2010 Annual Research Report
  • [Presentation] 離散分布モデルのモデル選択-ポアッソンとトーマスを中心に-2011

    • Author(s)
      柴田里程
    • Organizer
      統計関連学会連合大会
    • Place of Presentation
      九州大学
    • Year and Date
      2011-09-06
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] Cramer-von Mises統計量の漸近表現とMLE・MDEによるパラメータ推定の影響評価2011

    • Author(s)
      仲真弓, 柴田里程
    • Organizer
      統計関連学会連合大会
    • Place of Presentation
      九州大学
    • Year and Date
      2011-09-05
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] パラメータ推定を含むCramer-von Miseタイプ適合度検定統計量の漸近分布のパラメータ依存性2010

    • Author(s)
      仲真弓, 柴田里程
    • Organizer
      統計関連学会連合大会
    • Place of Presentation
      早稲田大学
    • Year and Date
      2010-09-07
    • Related Report
      2010 Final Research Report
  • [Presentation] Goodness of fit of Gamma distribution to sea fauna weights2009

    • Author(s)
      M. Naka, R. Shibata
    • Organizer
      The International Biometric Society Australasian Region
    • Place of Presentation
      Lake Taupo, New Zealand
    • Year and Date
      2009-11-30
    • Related Report
      2010 Final Research Report
  • [Presentation] Goodness of fit of Gamma distribution to sea fauna weights.2009

    • Author(s)
      M. Naka, R. Shibata
    • Organizer
      The International Biometric Society Australasian Region (New Zealand)
    • Place of Presentation
      Lake Taupo, New Zealand
    • Year and Date
      2009-11-30
    • Related Report
      2009 Self-evaluation Report
  • [Presentation] Goodness of fit of Gamma distribution to sea fauna weights2009

    • Author(s)
      仲真弓, 柴田里程
    • Organizer
      The International Biometric Society Australasian Region(New Zealand)
    • Place of Presentation
      Lake Taupo, New Zealand
    • Year and Date
      2009-11-30
    • Related Report
      2009 Annual Research Report
  • [Presentation] 独立異分布標本のPPプロットによる分布適合性の検証2009

    • Author(s)
      柴田里程, 菅谷勇樹
    • Organizer
      統計関連学会連合大会
    • Place of Presentation
      同志社大学
    • Year and Date
      2009-09-08
    • Related Report
      2010 Final Research Report 2009 Self-evaluation Report
  • [Presentation] 独立異分布標本のPPプロットによる分布適合性の検証2009

    • Author(s)
      柴田里程, 菅谷勇樹
    • Organizer
      統計関連連合大会
    • Place of Presentation
      同志社大学
    • Year and Date
      2009-09-08
    • Related Report
      2009 Annual Research Report
  • [Presentation] オーストラリア北部における大規模海底生物調査データの解析2009

    • Author(s)
      仲真弓, 柴田里程
    • Organizer
      統計関連学会連合大会
    • Place of Presentation
      同志社大学
    • Year and Date
      2009-09-07
    • Related Report
      2010 Final Research Report 2009 Annual Research Report
  • [Presentation] 確率継承アルゴリズムによるマルコフ樹の尤度評価2009

    • Author(s)
      菅谷勇樹, 柴田里程
    • Organizer
      統計関連学会連合大会
    • Place of Presentation
      同志社大学
    • Year and Date
      2009-09-07
    • Related Report
      2010 Final Research Report 2009 Annual Research Report
  • [Presentation] Smile Curve and Local Volatility2009

    • Author(s)
      R. Shibata, Y. Tanizawa
    • Organizer
      Australia-Japan Workshop on Data Science
    • Place of Presentation
      慶應義塾大学理工学部
    • Year and Date
      2009-03-27
    • Related Report
      2008 Annual Research Report
  • [Presentation] Modelling Counts in Trawling Data2009

    • Author(s)
      R. Shibata, Y. Sugaya
    • Organizer
      Australia-Japan Workshop on Data Science
    • Place of Presentation
      慶應義塾大学理工学部
    • Year and Date
      2009-03-24
    • Related Report
      2008 Annual Research Report
  • [Presentation] Smile Curve and Local Volatility2008

    • Author(s)
      R. Shibata and Y. Tanizawa
    • Organizer
      Australia-Japan Workshop on Data Science
    • Place of Presentation
      慶應義塾大学
    • Year and Date
      2008-03-27
    • Related Report
      2010 Final Research Report
  • [Presentation] Modelling Counts in Trawling Data2008

    • Author(s)
      R. Shibata and Y. Sugaya
    • Organizer
      Australia-Japan Workshop on Data Science
    • Place of Presentation
      慶應義塾大学
    • Year and Date
      2008-03-27
    • Related Report
      2010 Final Research Report
  • [Presentation] Likelihood-based method for estimating penetrance and disease susceptibility allele frequency2008

    • Author(s)
      Y. Sugaya and R. Shibata
    • Organizer
      Workshop on Data Science
    • Place of Presentation
      慶應義塾大学
    • Year and Date
      2008-03-25
    • Related Report
      2010 Final Research Report
  • [Presentation] What can we do for hedge fund return data under the DandD environment?2008

    • Author(s)
      D. Yokouchi and R. Miura
    • Organizer
      Workshop on Data Science
    • Place of Presentation
      慶應義塾大学
    • Year and Date
      2008-03-24
    • Related Report
      2010 Final Research Report
  • [Presentation] Weight distribution in trawling data.2008

    • Author(s)
      M. Naka and R. Shibata
    • Organizer
      Wrokshop on Data Science
    • Place of Presentation
      慶應義塾大学
    • Year and Date
      2008-03-24
    • Related Report
      2010 Final Research Report
  • [Presentation] ニューロン活動電位の3ステージダイナミックモデル2007

    • Author(s)
      島津秀康, 柴田里程
    • Organizer
      統計関連学会連合大会
    • Place of Presentation
      神戸大学
    • Year and Date
      2007-09-08
    • Related Report
      2010 Final Research Report 2007 Annual Research Report
  • [Presentation] アイスランド家系データにもとづく染色体上の交差確率の変化の推定2007

    • Author(s)
      菅谷勇樹, 柴田里程
    • Organizer
      統計関連学会連合大会
    • Place of Presentation
      神戸大学
    • Year and Date
      2007-09-07
    • Related Report
      2010 Final Research Report
  • [Presentation] Textile Plotによる高次元非線形関係の発見2007

    • Author(s)
      熊坂夏彦, 柴田里程
    • Organizer
      統計関連学会連合大会
    • Place of Presentation
      神戸大学
    • Year and Date
      2007-09-07
    • Related Report
      2010 Final Research Report
  • [Presentation] Textile Plot による高次元非線形関係の発見2007

    • Author(s)
      熊坂 夏彦, 柴田 里程
    • Organizer
      統計関連学会連合大会
    • Place of Presentation
      神戸大学
    • Year and Date
      2007-09-07
    • Related Report
      2007 Annual Research Report
  • [Presentation] アイスランド家系データにもどづく染色体上の交差確率の変化の推定2007

    • Author(s)
      菅谷 勇樹, 柴田 里程
    • Organizer
      統計関連学会連合大会
    • Place of Presentation
      神戸大学
    • Year and Date
      2007-09-07
    • Related Report
      2007 Annual Research Report
  • [Presentation] DandD環境による金融データベースシステムの構築2007

    • Author(s)
      横内 大介
    • Organizer
      統計関連学会連合大会
    • Place of Presentation
      神戸大学
    • Year and Date
      2007-09-07
    • Related Report
      2007 Annual Research Report
  • [Remarks]

    • URL

      http://www.stat.math.keio.ac.jp

    • Related Report
      2010 Final Research Report
  • [Remarks]

    • URL

      http://www.stat.math.keio.ac.jp

    • Related Report
      2010 Annual Research Report
  • [Remarks]

    • URL

      http://www.stat.math.keio.ac.jp

    • Related Report
      2009 Annual Research Report
  • [Remarks]

    • URL

      http://stat.math.keio.ac.jp/

    • Related Report
      2008 Annual Research Report
  • [Remarks]

    • URL

      http://www.stat.math.keio.ac.jp

    • Related Report
      2007 Annual Research Report

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Published: 2007-04-01   Modified: 2016-04-21  

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