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Molecular simulation study of membrane morphology change induced by proteins

Research Project

Project/Area Number 19370069
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Biophysics
Research InstitutionKyoto University

Principal Investigator

TAKADA Shoji  Kyoto University, 大学院・理学研究科, 准教授 (60304086)

Project Period (FY) 2007 – 2009
Project Status Completed (Fiscal Year 2009)
Budget Amount *help
¥18,200,000 (Direct Cost: ¥14,000,000、Indirect Cost: ¥4,200,000)
Fiscal Year 2009: ¥7,150,000 (Direct Cost: ¥5,500,000、Indirect Cost: ¥1,650,000)
Fiscal Year 2008: ¥7,020,000 (Direct Cost: ¥5,400,000、Indirect Cost: ¥1,620,000)
Fiscal Year 2007: ¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Keywordsベシクル融合 / ベシクル発芽 / ラフト / 粗視化モデル / シミュレーション / インフルエンザ / SNARE
Research Abstract

Membrane morphology change, such as cell fusion and cell division, is induced by related proteins. The aim of the research here is to develop a coarse-grained simulation model for protein-membrane complex and to apply it to the membrane morphology dynamics. We extended the multiple-basin model for proteins, used Noguchi model for lipids, and proposed the excluded volume and hydrophobic interaction terms for the protein-lipid interaction. By this new model, we successfully simulated vesicle formation, vesicle fusion, phase separation of 2-components vesicle, and budding addressing their mechanisms.

Report

(4 results)
  • 2009 Annual Research Report   Final Research Report ( PDF )
  • 2008 Annual Research Report
  • 2007 Annual Research Report
  • Research Products

    (76 results)

All 2010 2009 2008 2007

All Journal Article (12 results) (of which Peer Reviewed: 12 results) Presentation (64 results)

  • [Journal Article] Paddling mechanism for the substrate translocation by AAA+ motor revealed by multiscale molecular simulations2009

    • Author(s)
      Nobuyasu Koga、Tomoshi Kameda、Kei-ichi Okazaki、Shoji Takada
    • Journal Title

      Proceedings of the National Academy of Sciences USA Vol.106

      Pages: 18237-18242

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Folding energy landscape and network dynamics of small globular proteins2009

    • Author(s)
      Naoto Hori、George Chikenji、R. Stephen Berry、Shoji Takada
    • Journal Title

      Proceedings of the National Academy of Sciences USA Vol.106

      Pages: 73-78

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] アロステリーの分子機構 : MWCかあるいはKNFか?2009

    • Author(s)
      岡崎圭一, 高田彰二
    • Journal Title

      生物物理 Vol. 49

      Pages: 132-134

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Self-learning multiscale simulation for achieving high accuracy and high efficiency simultaneously2009

    • Author(s)
      Wenfei Li, Shoji Takada
    • Journal Title

      J.Chemical Physics Vol. 130

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Paddling mechanism for the substrate translocation by AAA+ motor revealed by multiscale molecular simulations2009

    • Author(s)
      Nobuyasu Koga, Tomoshi Kameda, Kei-ichi Okazaki, Shoji Takada
    • Journal Title

      Proc.Nat.Acad.Sci.USA Vol. 106

      Pages: 18237-18242

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Folding energy landscape and network dynamics of small globular proteins2009

    • Author(s)
      Naoto Hori, George Chikenji, R. Stephen Berry, Shoji Takada
    • Journal Title

      Proceedings of the National Academy of Sciences USA 106

      Pages: 73-78

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Dynamic energy landscape view of coupled binding and protein conformational change: Induced-fit versus population-shift mechanisms2008

    • Author(s)
      Kei-ichi Okazaki、Shoji Takada
    • Journal Title

      Proceedings of the National Academy of Sciences USA Vol.105

      Pages: 11182-11187

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Asymmetry in membrane protein sequence and structure: Glycine outside rule2008

    • Author(s)
      Wenzhen Jin、Shoji Takada
    • Journal Title

      Journal of Molecular Biology Vol.377

      Pages: 74-82

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] In silico chaperonin-like cycle helps folding of proteins for structure prediction2008

    • Author(s)
      Tadaomi Furuta, Yoshimi Fujitsuka, George Chikenji, Shoji Takada
    • Journal Title

      Biophysical Journal 94

      Pages: 2558-2565

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Dynamic energy landscape view of coupled binding and protein conformational change : Induced-fit versus2008

    • Author(s)
      Kei-ichi Okazaki, Shoji Takada
    • Journal Title

      Proceedings of the National Academy of Sciences USA 105

      Pages: 11182-11187

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] In silico chaperonin-like cycle helps folding of proteins for structure prediction2008

    • Author(s)
      Tadaomi Furuta, Yoshimi Fujitsuka, George Chikenji, and Shoji Takada
    • Journal Title

      Biophysical Jouxnal 94

      Pages: 2558-2565

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Asymmetry in membrane protein sequence and structure: Glycine outside rule2008

    • Author(s)
      Wenzhen Jin and Shoji Takada
    • Journal Title

      Journal of Molecular Biology 377

      Pages: 74-82

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Presentation] FUNCTIONALLY ROTATING MECHANISM OF A MULTIDRUG TRANSPORTER STUDIED BY COARSE-GRAINED SIMULATION2010

    • Author(s)
      Xin-Qiu Yao, Hiroo Kenzaki, Shoji Takada
    • Organizer
      Biophysical Society 54th Annual Meeting
    • Place of Presentation
      San Francisco(USA)
    • Related Report
      2009 Final Research Report
  • [Presentation] BIOMOLECULAR COARSE-GRAINED SIMULATION PROGRAM CAFEMOL2010

    • Author(s)
      Hiroo Kenzaki、Nobuyasu Koga、Shinji Fujiwara、Shoji Takada
    • Organizer
      Biophysical Society 54th Annual Meeting
    • Place of Presentation
      San Francisco(USA)
    • Related Report
      2009 Final Research Report
  • [Presentation] MECHANISM OF UNIDIRECTIONAL MOVE OF KIF1A MOTOR STUDIED BY COARSE-GRAINED SIMULATIONS2010

    • Author(s)
      Ryo Kanada, Takeshi Kuwata, Hiroo Kenzaki, Shoji Takada
    • Organizer
      Biophysical Society 54th Annual Meeting
    • Place of Presentation
      San Francisco (USA)
    • Related Report
      2009 Annual Research Report
  • [Presentation] BIOMOLECULAR COARSE-GRAINED SIMULATION PROGRAM CAFEMOL2010

    • Author(s)
      Hiroo Kenzaki, Nobuyasu Koga, Shinji Fujiwara
    • Organizer
      Biophysical Society 54th Annual Meeting
    • Place of Presentation
      San Francisco (USA)
    • Related Report
      2009 Annual Research Report
  • [Presentation] FUNCTIONALLY ROTATING MECHANISM OF A MULTIDRUG TRANSPORTER STUDIED BY COARSE-GRAINED SIMULATION2010

    • Author(s)
      Xin-Qiu Yao, Hiroo Kenzaki, Shoji Takada
    • Organizer
      Biophysical Society 54th Annual Meeting
    • Place of Presentation
      San Francisco (USA)
    • Related Report
      2009 Annual Research Report
  • [Presentation] Protein folding network, and energy landscape, studied by parallel Wang-Landau sampling2009

    • Author(s)
      Shoji Takada
    • Organizer
      Supercomputing in Solid State Physics 2009
    • Place of Presentation
      物性研究所
    • Year and Date
      2009-02-16
    • Related Report
      2008 Annual Research Report
  • [Presentation] Membrane morphology dynamics induced by proteins: Coarse-grained molecular simulationsタンパク質によって誘起される膜形態ダイナミクス:粗視化分子シミュレーション2009

    • Author(s)
      藤原慎司、高田彰二
    • Organizer
      第47回日本生物物理学会年会
    • Place of Presentation
      アスティとくしま(徳島市)
    • Related Report
      2009 Final Research Report
  • [Presentation] Functionally rotating mechanism of a multidrug transporter studied by coarse-grained simulation2009

    • Author(s)
      Xin-Qiu Yao、Hiroo Kenzaki, Shoji Takada
    • Organizer
      第47回日本生物物理学会年会
    • Place of Presentation
      アスティとくしま(徳島市)
    • Related Report
      2009 Final Research Report
  • [Presentation] 蛋白質の大振幅ゆらぎと機能の分子シミュレーション研究2009

    • Author(s)
      高田彰二
    • Organizer
      第47回日本生物物理学会年会
    • Place of Presentation
      アスティとくしま(徳島市)
    • Related Report
      2009 Final Research Report
  • [Presentation] Working principle of biomolecular motors revealed by molecular dynamics simulations2009

    • Author(s)
      Shoji Takada
    • Organizer
      The 238th American Chemical Society National Meeting
    • Place of Presentation
      Washington D.C. (USA)
    • Related Report
      2009 Final Research Report
  • [Presentation] Functionally rotating mechanism of a multidrug transporter studied by coarse-grained simulation2009

    • Author(s)
      Xin-Qiu Yao、Hiroo Kenzaki, Shoji Takada
    • Organizer
      次世代生命体統合PJ分子スケールワークショップ「ペタフロップスコンピューティングに向けた生体高分子シミュレーションの最前線」
    • Place of Presentation
      東京大学生産技術研究所(東京都)
    • Related Report
      2009 Final Research Report
  • [Presentation] CafeMol:生体分子粗視化シミュレーションプログラム2009

    • Author(s)
      検崎博生、古賀信康、藤原慎司、堀直人、金田亮、岡崎圭一、姚新秋、高田彰二
    • Organizer
      次世代生命体統合PJ分子スケールワークショップ「ペタフロップスコンピューティングに向けた生体高分子シミュレーションの最前線」
    • Place of Presentation
      東京大学生産技術研究所(東京都)
    • Related Report
      2009 Final Research Report
  • [Presentation] Biomolecular Coarse-Grained Simulation Program2009

    • Author(s)
      Hiroo Kenzaki, Nobuyasu Koga, Shinji Fujiwara, Naoto Hori, Ryo Kanada, Kei-ichi Okazaki, Xin-Qiu Yao, Shoji Takada、CafeMol
    • Organizer
      RIKEN Joint Computational Science Workshop 2009
    • Place of Presentation
      理化学研究所(横浜市)
    • Related Report
      2009 Final Research Report
  • [Presentation] Functionally rotating mechanism of a multidrug transporter studied by coarse-grained simulation2009

    • Author(s)
      Xin-Qiu Yao、Hiroo Kenzaki, Shoji Takada
    • Organizer
      International Symposium on "Reaction Dynamics of Many-Body Chemical Systems"
    • Place of Presentation
      京都ガーデンプレス(京都市)
    • Related Report
      2009 Final Research Report
  • [Presentation] Working Principle of Biomolecular Motors Revealed by Molecular Dynamics Simulations2009

    • Author(s)
      Shoji Takada
    • Organizer
      International Symposium on "Reaction Dynamics of Many-Body Chemical Systems"
    • Place of Presentation
      京都ガーデンプレス(京都市)
    • Related Report
      2009 Final Research Report
  • [Presentation] 計算機実験による生体分子モーターの作動原理探求2009

    • Author(s)
      高田彰二
    • Organizer
      自然科学研究機構スーパーコンピューターワークショップ2009
    • Place of Presentation
      自然科学研究機構岡崎コンファレンスセンター
    • Related Report
      2009 Final Research Report
  • [Presentation] Working Principle of Biomolecular Motors Revealed by Molecular Dynamics Simulations2009

    • Author(s)
      高田彰二
    • Organizer
      International Symposium on "Reaction Dynamics of Many-Body Chemical Systems"
    • Place of Presentation
      京都ガーデンプレス (京都市)
    • Related Report
      2009 Annual Research Report
  • [Presentation] Self-Learning Multi-scale Simulations2009

    • Author(s)
      Wenfei Li, Shoji Takada
    • Organizer
      International Symposium on "Reaction Dynamics of Many-Body Chemical Systems"
    • Place of Presentation
      京都ガーデンプレス (京都市)
    • Related Report
      2009 Annual Research Report
  • [Presentation] Functionally rotating mechanism of a multidrug transporter studied by coarse-grained simulation2009

    • Author(s)
      Xin-Qiu Yao, Hiroo Kenzaki, Shoji Takada
    • Organizer
      International Symposium on "Reaction Dynamics of Many-Body Chemical Systems"
    • Place of Presentation
      京都ガーデンプレス (京都市)
    • Related Report
      2009 Annual Research Report
  • [Presentation] Mechanism of unidirectional move of KIF1A motor studied by coarse-grained simulations2009

    • Author(s)
      金田亮
    • Organizer
      RIKEN Joint Computational Science Workshop 2009
    • Place of Presentation
      理化学研究所 (横浜市)
    • Related Report
      2009 Annual Research Report
  • [Presentation] CafeMol : Biomolecular Coarse-Grained Simulation Program2009

    • Author(s)
      Hiroo Kenzaki, Nobuyasu Koga, Shinji Fujiwara, Naoto Hori, Ryo Kanada, Kei-ichi Okazaki, Xin-Qiu Yao, Shoji Takada
    • Organizer
      RIKEN Joint Computational Science Workshop 2009
    • Place of Presentation
      理化学研究所 (横浜市)
    • Related Report
      2009 Annual Research Report
  • [Presentation] Working principles of biomolecular motors studied by multiscale simulations2009

    • Author(s)
      高田彰二
    • Organizer
      International Symposium on Multi-Scale Dynamics of Protein Complex Formation and Function
    • Place of Presentation
      東京大学 (東京都)
    • Related Report
      2009 Annual Research Report
  • [Presentation] Self-learning multiscale simulations for biomolecular systems2009

    • Author(s)
      Wenfei Li, Shoji Takada
    • Organizer
      International Symposium on Multi-Scale Dynamics of Protein Complex Formation and Function
    • Place of Presentation
      東京大学 (東京都)
    • Related Report
      2009 Annual Research Report
  • [Presentation] CafeMol : 生体分子粗視化シミュレーションプログラム2009

    • Author(s)
      検崎博生, 古賀信康, 藤原慎司, 堀直人, 金田亮, 岡崎圭一, 姚新秋, 高田彰二
    • Organizer
      次世代生命体統合PJ分子スケールワークショップ「ペタフロップスコンピューティングに向けた生体高分子シミュレーションの最前線」
    • Place of Presentation
      東京大学生産技術研究所 (東京都)
    • Related Report
      2009 Annual Research Report
  • [Presentation] Functionally rotating mechanism of a multidrug transporter studied by coarse-grained simulation2009

    • Author(s)
      Xin-Qiu Yao, Hiroo Kenzaki, Shoji Takada
    • Organizer
      次世代生命体統合PJ分子スケールワークショップ「ペタフロップスコンピューティングに向けた生体高分子シミュレーションの最前線」
    • Place of Presentation
      東京大学生産技術研究所 (東京都)
    • Related Report
      2009 Annual Research Report
  • [Presentation] KIF1A分子モーターの一方向性の運動発現機構の解明2009

    • Author(s)
      金田亮, 桑田豪, 検崎博生, 高田彰二
    • Organizer
      次世代生命体統合PJ分子スケールワークショップ「ペタフロップスコンピューティングに向けた生体高分子シミュレーションの最前線」
    • Place of Presentation
      東京大学生産技術研究所 (東京都)
    • Related Report
      2009 Annual Research Report
  • [Presentation] Working principle of biomolecular motors revealed by molecular dynamics simulations2009

    • Author(s)
      高田彰二
    • Organizer
      The 238th American Chemical Society National Meeting
    • Place of Presentation
      Washington D. C. (USA)
    • Related Report
      2009 Annual Research Report
  • [Presentation] 蛋白質の大振幅ゆらぎと機能の分子シミュレーション研究2009

    • Author(s)
      高田彰二
    • Organizer
      第47回日本生物物理学会年会
    • Place of Presentation
      アスティとくしま (徳島市)
    • Related Report
      2009 Annual Research Report
  • [Presentation] KIF1A分子モーターの一方向性の運動発現機構のシミュレーション研究2009

    • Author(s)
      金田亮, 桑田豪, 岡崎圭一, 検崎博生, 高田彰二
    • Organizer
      第47回日本生物物理学会年会
    • Place of Presentation
      アスティとくしま (徳島市)
    • Related Report
      2009 Annual Research Report
  • [Presentation] Coarse-grained simulation of protein-DNA complex : dynamics of nucleosome2009

    • Author(s)
      検崎博生, 高田彰二
    • Organizer
      第47回日本生物物理学会年会
    • Place of Presentation
      アスティとくしま (徳島市)
    • Related Report
      2009 Annual Research Report
  • [Presentation] Folding simulations of chignolin by self-learning multiscale method2009

    • Author(s)
      Wenfei Li, Shoji Takada
    • Organizer
      第47回日本生物物理学会年会
    • Place of Presentation
      アスティとくしま (徳島市)
    • Related Report
      2009 Annual Research Report
  • [Presentation] Functionally rotating mechanism of a multidrug transporter studied by coarse-grained simulation2009

    • Author(s)
      Xin-Qiu Yao, Hiroo Kenzaki, Shoji Takada
    • Organizer
      第47回日本生物物理学会年会
    • Place of Presentation
      アスティとくしま (徳島市)
    • Related Report
      2009 Annual Research Report
  • [Presentation] レプリカ交換法による巨大タンパク質-核酸複合系の粗視化シミュレーション研究2009

    • Author(s)
      Naoto Hori, Hiroo Kenzaki, Shoji Takada
    • Organizer
      第47回日本生物物理学会年会
    • Place of Presentation
      アスティとくしま (徳島市)
    • Related Report
      2009 Annual Research Report
  • [Presentation] Membrane morphology dynamics induced by proteins : Coarse-grained molecular simulations タンパク質によって誘起される膜形態ダイナミクス : 粗視化分子シミュレーション2009

    • Author(s)
      藤原慎司, 高田彰二
    • Organizer
      第47回日本生物物理学会年会
    • Place of Presentation
      アスティとくしま (徳島市)
    • Related Report
      2009 Annual Research Report
  • [Presentation] 計算機実験による生体分子モーターの作動原理探求2009

    • Author(s)
      高田彰二
    • Organizer
      自然科学研究機構スーパーコンピューターワークショップ2009
    • Place of Presentation
      自然科学研究機構 岡崎コンフアレンスセン
    • Related Report
      2008 Annual Research Report
  • [Presentation] Molecular Simulation Study of Kinesin : Coupling between ATPase Domain Conformational Change and Mechanical2009

    • Author(s)
      Ryo Kanada, Kei-ichi Okazaki, Shoji Takada
    • Organizer
      The Biophysical Society's 53rd Annual Meeting
    • Place of Presentation
      Boston
    • Related Report
      2008 Annual Research Report
  • [Presentation] Self-learning multi-scale simulation2009

    • Author(s)
      Wenfei Li, Shoji Takada
    • Organizer
      The Biophysical Society's 53rd Annual Meeting
    • Place of Presentation
      Boston
    • Related Report
      2008 Annual Research Report
  • [Presentation] 計算機実験による生体分子モーターの作動原理探求2008

    • Author(s)
      高田彰二
    • Organizer
      産業総合研究所生命情報工学研究センター研究報告シンポジウム
    • Place of Presentation
      産業総合研究所生命情報工学研究センター
    • Year and Date
      2008-11-07
    • Related Report
      2009 Final Research Report
  • [Presentation] 計算機実験による生体分子モーターの作動原理探求2008

    • Author(s)
      高田彰二
    • Organizer
      産業総合研究所生命時報工学研究センター研究報告シンポジウム
    • Place of Presentation
      産業総合研究所生命情報報工学研究センター
    • Year and Date
      2008-11-07
    • Related Report
      2008 Annual Research Report
  • [Presentation] 構造変化シミュレーションからの生体分子機械の作動原理探求2008

    • Author(s)
      高田彰二
    • Organizer
      大阪大学蛋白質研究所セミナー「蛋白質の構造変化の仕組みを探る」
    • Place of Presentation
      大阪大学蛋白質研究所(吹田)
    • Year and Date
      2008-03-03
    • Related Report
      2009 Final Research Report 2007 Annual Research Report
  • [Presentation] 巨大生体分子複合系のマルチスケールシミュレーションに向けて2008

    • Author(s)
      高田彰二
    • Organizer
      バイオスーパーコンピューティング・シンポジウム(BSCS)
    • Place of Presentation
      理化学研究所
    • Related Report
      2009 Final Research Report 2008 Annual Research Report
  • [Presentation] 膜融合を引き起こすウイルスタンパク質の大規模構造変化のシミュレーション研究2008

    • Author(s)
      藤原慎司、高田彰二
    • Organizer
      第46回日本生物物理学会年会
    • Place of Presentation
      福岡国際会議場
    • Related Report
      2009 Final Research Report 2008 Annual Research Report
  • [Presentation] 結合による構造変化と生体分子システムの作動原理2008

    • Author(s)
      岡崎圭一、高田彰二
    • Organizer
      第46回日本生物物理学会年会
    • Place of Presentation
      福岡国際会議場
    • Related Report
      2009 Final Research Report 2008 Annual Research Report
  • [Presentation] 構造変化とリガンド結合の共役メカニズム:induced-fit vs population-shift2008

    • Author(s)
      岡崎圭一、高田彰二
    • Organizer
      第22回分子シミュレーション討論会
    • Place of Presentation
      岡山大学
    • Related Report
      2009 Final Research Report
  • [Presentation] Working principle of biomolecular motors revealed by multi-scale simulations2008

    • Author(s)
      Shoji Takada
    • Organizer
      The 235th American Chemical Society National Meeting
    • Place of Presentation
      New Orleans
    • Related Report
      2009 Final Research Report 2008 Annual Research Report
  • [Presentation] Protein folding network, and energy landscape, studied by parallel Wang-Landau sampling2008

    • Author(s)
      Shoji Takada
    • Organizer
      The 235th American Chemical Society National Meeting
    • Place of Presentation
      New Orleans
    • Related Report
      2008 Annual Research Report
  • [Presentation] 計算機実験による生体分子モーターの作動原理探求2008

    • Author(s)
      高田彰二
    • Organizer
      東北大理学部化学教室講演会
    • Place of Presentation
      東北大学
    • Related Report
      2008 Annual Research Report
  • [Presentation] 構造変化とリガンド結合の共役メカニズム : induced-fit vs population-shift2008

    • Author(s)
      岡崎圭一, 高田彰二
    • Organizer
      第22回分子シミュレーション討論会
    • Place of Presentation
      岡山大学
    • Related Report
      2008 Annual Research Report
  • [Presentation] 粗視化モデルによる双頭キネシンのステップ機構の解明2008

    • Author(s)
      金田亮, 岡崎圭一, 高田彰二
    • Organizer
      第46回日本生物物理学会年会
    • Place of Presentation
      福岡国際会議場
    • Related Report
      2008 Annual Research Report
  • [Presentation] Coarse-grained simulation of complex of protein and DNA2008

    • Author(s)
      検崎博生, 高田彰二
    • Organizer
      第46回日本生物物理学会年会
    • Place of Presentation
      福岡国際会議場
    • Related Report
      2008 Annual Research Report
  • [Presentation] Adaptive multi-scale simulations of biomolecules for achieving high accuracy and high efficiency2008

    • Author(s)
      Wenfei Li, Shoji Takada
    • Organizer
      第46回日本生物物理学会年会
    • Place of Presentation
      福岡国際会議場
    • Related Report
      2008 Annual Research Report
  • [Presentation] Coarse-grained simulation for understanding working mechanism of Fl-ATPase2008

    • Author(s)
      Kei-ichi Okazaki, Shoji Takada
    • Organizer
      第46回日本生物物理学会年会
    • Place of Presentation
      福岡国際会議場
    • Related Report
      2008 Annual Research Report
  • [Presentation] Mechanical principle of the motor protein KIFIA studied by molecular dynamics simulation (2)2008

    • Author(s)
      Takeshi Kuwata, Kei-ichi Okazaki, Ryo Kanada, Hiroo Kenzaki
    • Organizer
      第46回日本生物物理学会年会
    • Place of Presentation
      福岡国際会議場
    • Related Report
      2008 Annual Research Report
  • [Presentation] Folding energy landscape of small globular proteins at atomistic resolution revealed by multiscale modeling2008

    • Author(s)
      Hiroaki Yoshii, Naoto Hori, Tomoshi Kameda, Shoii Takada
    • Organizer
      第46回日本生物物理学会年会
    • Place of Presentation
      福岡国際会議場
    • Related Report
      2008 Annual Research Report
  • [Presentation] 粗視化モデルによるタンパク質の構造変化とリガンド結合の共役メカニズムの解明:分子モーターへの応用2007

    • Author(s)
      岡崎圭一, 高田彰二
    • Organizer
      第45回日本生物物理学会年会
    • Place of Presentation
      横浜パシフィコ
    • Related Report
      2009 Final Research Report 2007 Annual Research Report
  • [Presentation] Asymmetry in membrane protein sequence and structure: Glycine outside rule2007

    • Author(s)
      Wenzhen Jin、Shoji Takada
    • Organizer
      第45回日本生物物理学会年会
    • Place of Presentation
      横浜パシフィコ
    • Related Report
      2009 Final Research Report 2007 Annual Research Report
  • [Presentation] 計算機実験による生体分子システムの作動原理探求2007

    • Author(s)
      高田彰二
    • Organizer
      第1回論理薬研究会
    • Place of Presentation
      岐阜大学
    • Related Report
      2009 Final Research Report 2007 Annual Research Report
  • [Presentation] Working principle of molecular motors revealed by molecular simulations2007

    • Author(s)
      Shoji Takada
    • Organizer
      WORKSHOP ON COMPUTATIONAL BIOPHYSICS
    • Place of Presentation
      Nagoya University
    • Related Report
      2009 Final Research Report 2007 Annual Research Report
  • [Presentation] The working principle of biomolecular machines revealed by molecular simulations2007

    • Author(s)
      Shoji Takada
    • Organizer
      The 10th Asia Pacific Physical Conference
    • Place of Presentation
      Pohang, Korea
    • Related Report
      2009 Final Research Report 2007 Annual Research Report
  • [Presentation] タンパク質の構造変化とligand結合との共役の仕方: ligand結合の効果を取り入れたMultiple-basin energy landscape modelによるシミュレーション2007

    • Author(s)
      岡崎圭一、高田彰二
    • Organizer
      第7回日本蛋白質科学会年会
    • Place of Presentation
      仙台国際センター
    • Related Report
      2009 Final Research Report
  • [Presentation] 膜蛋白質のアミノ酸分布の非対称性について2007

    • Author(s)
      金文珍、高田彰二
    • Organizer
      第7回日本蛋白質科学会年会
    • Place of Presentation
      仙台国際センター
    • Related Report
      2009 Final Research Report 2007 Annual Research Report
  • [Presentation] ミオシンVの運動機構の解明に向けて-粗視化モデルによる分子シミュレーション-2007

    • Author(s)
      古賀理恵(京都大)、古賀信康、高田彰二
    • Organizer
      第7回日本蛋白質科学会年会
    • Place of Presentation
      仙台国際センター
    • Related Report
      2007 Annual Research Report
  • [Presentation] タンパク質の構造変化とligand結合との共役の仕方:ligand結合の効果を取り入れたMultip!e-basin energy landscape modelによるシミュレーション2007

    • Author(s)
      岡崎圭一(神戸大)、高田彰二
    • Organizer
      第7回日本蛋白質科学会年会
    • Place of Presentation
      仙台国際センター
    • Related Report
      2007 Annual Research Report
  • [Presentation] 生体分子モーターの粗視化分子シミュレーション2007

    • Author(s)
      高田 彰二
    • Organizer
      日本物理学会第62回年次大会
    • Place of Presentation
      北海道大学札幌キャンパス
    • Related Report
      2007 Annual Research Report

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Published: 2007-04-01   Modified: 2016-04-21  

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