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Analysis of gene regulation and eye development by a novel nuclear protein, Nemp1

Research Project

Project/Area Number 19370091
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Developmental biology
Research InstitutionThe University of Tokyo

Principal Investigator

TAIRA Masanori  The University of Tokyo, 大学院・理学系研究科, 准教授 (60150083)

Project Period (FY) 2007 – 2009
Project Status Completed (Fiscal Year 2009)
Budget Amount *help
¥17,160,000 (Direct Cost: ¥13,200,000、Indirect Cost: ¥3,960,000)
Fiscal Year 2009: ¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Fiscal Year 2008: ¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Fiscal Year 2007: ¥6,760,000 (Direct Cost: ¥5,200,000、Indirect Cost: ¥1,560,000)
Keywords初期発生 / 眼形成 / 核内膜蛋白質 / 遺伝子発現調節 / otx2 / rax / BAF / Ran / アフリカツメガエル / 眼胞形成 / 核膜蛋白質 / 核内輸送 / Nempl / Otx2 / クロマチン蛋白質 / Nemp1 / BAF結合配列
Research Abstract

We investigated the molecular mechanism of the role of a nuclear membrane protein, Nemp1, in gene regulation during early Xenopus eye development. We found that Nemp1 is localized to the inner nuclear membrane with region B facing the nucleoplasm, and that Nemp1 binds to Barrier-to-Autointegration Factor (BAF) and the GTP form of the small GTPase Ran. Nemp1 inhibits activation of a rax enhancer reporter gene by Otx2 in a region B-dependent manner. These data lead to the possibility that Nemp1 is involved in the expression of the eye-specific gene rax by functioning at the inner nuclear membrane through interactions with BAF and Ran.

Report

(4 results)
  • 2009 Annual Research Report   Final Research Report ( PDF )
  • 2008 Annual Research Report
  • 2007 Annual Research Report
  • Research Products

    (44 results)

All 2010 2009 2008 2007 Other

All Journal Article (16 results) (of which Peer Reviewed: 10 results) Presentation (26 results) Remarks (2 results)

  • [Journal Article] Secreted Frizzled-related proteins enhance the diffusion of Wnt ligands and expand their signalling range2009

    • Author(s)
      Mii, Y., Taira M.
    • Journal Title

      Development 136

      Pages: 4083-4088

    • Related Report
      2009 Final Research Report
  • [Journal Article] The RNA binding protein Mex3b has a fine-tuning system for mRNA regulation in early Xenopus development2009

    • Author(s)
      Takada, H., Kawana, T., Ito, Y., Kikuno, R. F., Mamada, H., Araki, T., Koga, H., Asashima, M., Taira M.
    • Journal Title

      Development 136

      Pages: 2413-2422

    • Related Report
      2009 Final Research Report
  • [Journal Article] Evolutionary origins of blastoporal expression and organizer activity of the vertebrate gastrula organizer gene lhxl and its ancient metazoan paralog lhx32009

    • Author(s)
      Yasuoka, Y., Kobayashi, M., Kurokawa, D., Akasaka, K., Saiga, H., Taira M.
    • Journal Title

      Development 136

      Pages: 2005-2014

    • Related Report
      2009 Final Research Report
  • [Journal Article] Involvement of an inner nuclear membrane protein, Nempl, in Xenopus neural development through an interaction with the chromatin protein2009

    • Author(s)
      Mamada, H., Takahashi, N., Taira M.
    • Journal Title

      BAF.Dev.Biol 327

      Pages: 497-507

    • Related Report
      2009 Final Research Report
  • [Journal Article] Involvement of an inner nuclear membrane protein, Nemp1, in Xenopus neural development through an interaction with the chromatin protein BAF2009

    • Author(s)
      Mamada, H., Takahashi, N., Taira, M.
    • Journal Title

      Dev.Biol.

      Volume: 327 Pages: 497-507

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The RNA binding protein Mex3b has a fine-tuning system for mRNA regulation in early Xenopus development2009

    • Author(s)
      Takada, H., Kawana, T., Ito, Y., Kikuno, R.F., Mamada, H., Araki, T., Koga, H., Asashima, M., Taira, M.
    • Journal Title

      Development

      Volume: 136 Pages: 2413-2422

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Evolutionary roots of blastoporal expression and 'organizer' activity of the vertebrate gastrula organizer gene lhx1 and its ancient metazoan paralog lhx32009

    • Author(s)
      Yasuoka, Y, Kobayashi, M., Kurokawa, D., Akasaka, K., Saiga, H., Taira, M
    • Journal Title

      Development

      Volume: 136 Pages: 2005-2014

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] LIM family transcription factors regulate the subtype-specific morphogenesis of retinal horizontal cells at post-migratory stages2009

    • Author(s)
      Suga, A., Taira, M., Nakagawa, S
    • Journal Title

      Dev.Biol.

      Volume: 330 Pages: 318-328

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The keratin-related Ouroboros proteins function as immune antigens mediating tail regression in Xenopus metamorphosis2009

    • Author(s)
      Mukaigasa, K., Hanasaki, A., Maeno, M., Fujii, H., Hayashida, S.-i., Itoh, M., Kobayashi, M., Tochinai, S., Hatta, M., Iwabuchi, K., Taira, M., Onoe, K., Izutsu, Y.
    • Journal Title

      Proc.Natl.Acad.Sci.USA

      Volume: 106 Pages: 118309-18314

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Secreted Frizzled-related proteins enhance the diffusion of Wnt ligands and expand their signalling range2009

    • Author(s)
      Mii, Y., Taira, M.
    • Journal Title

      Development

      Volume: 136 Pages: 4083-4088

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Involvement of an inner nuclear membrane protein, Nempl, in Xenopus neural development through an interaction with the chromatin protein BAF.2009

    • Author(s)
      Mamada, H., (他2名)
    • Journal Title

      Dev. Biol 327

      Pages: 497-507

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Progranulin, a secreted tumorigenesis and dementia?related factor, regulates mouse hair growth.2008

    • Author(s)
      Kato, M., (他7名)
    • Journal Title

      J. Dermatol. Sci. 53

      Pages: 234-236

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Inaugural Article: A comparative analysis of frog early development2007

    • Author(s)
      del Pine, E. M., Venegas-Ferrin, M., Romero-Carvajal, A., Montenegro-Larrea, P., Saenz-Ponce, N., Moya, I. M., Alarcon, I., Sudou, N., Yamamoto, S., Taira M.
    • Journal Title

      Proc.Natl.Acad.Sci.USA 104

      Pages: 11882-11888

    • Related Report
      2009 Final Research Report
  • [Journal Article] Recombinant To12 transposase with activity in Xenopus embryos2007

    • Author(s)
      Shibano, T., Taira M., Suetake, I., Kawakami, K., Asashima, M., Tajima, S., Taira M.
    • Journal Title

      FEBS Lett 581

      Pages: 4333-4336

    • Related Report
      2009 Final Research Report
  • [Journal Article] Recombinant Tol2 transposase with activity in Xenopus embryos2007

    • Author(s)
      Shibano, T., 他6名
    • Journal Title

      FEBS Lett. 581

      Pages: 4333-4336

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Inaugural Article : A comparative analysis of frog early development2007

    • Author(s)
      Del Pino, E. M., 他10名
    • Journal Title

      Proc. Natl. Acad. Sci. USA 104

      Pages: 11882-11888

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Presentation] Molecular mechanisms of the regulation of rax expression by the inner nuclear membrane protein Nempl in vertebrate eye development2010

    • Author(s)
      T.Shibano, H.Mamada, N.Sudou, F.Hakuno, S.-I.Takahashi, M.Taira
    • Organizer
      The 2010 CSHL Symposium on Nuclear Organization & Function
    • Related Report
      2009 Final Research Report
  • [Presentation] Molecular mechanisms of the regulation of rax expression by the inner nuclear membrane protein Nempl in vertebrate eye development2009

    • Author(s)
      T.Shibano, H.Mamada, F.Hakuno, S.-I.Takahashi , H.Koga, M.Taira
    • Organizer
      第32回分子生物学会年会、(柴野、ワークショップロ頭発表とポスター発表)
    • Place of Presentation
      横浜
    • Related Report
      2009 Final Research Report
  • [Presentation] Interaction of the inner nuclear membrane protein Nempl with the chromatin protein BAF and the small GTPase Ran in Xenopus embryos2009

    • Author(s)
      T.i Shibano, H.Mamada, F.Hakuno, S.-I.Takahashi , H.Koga, M.Taira
    • Organizer
      日本発生生物学会第42回大会、(柴野、 口頭発表)
    • Place of Presentation
      新潟
    • Related Report
      2009 Final Research Report
  • [Presentation] Molecular mechanisms of the regulation of rax expression by the inner nuclear membrane protein Nemp1 in vertebrate eye development2009

    • Author(s)
      Takashi Shibano、Hiroshi Mamada、Fumihiko Hakuno、Shin-Ichiro Takahashi、Hisashi Koea, Masanori Taira
    • Organizer
      第32回分子生物学会年会
    • Place of Presentation
      横浜パシフィコ
    • Related Report
      2009 Annual Research Report
  • [Presentation] 初期パターン形成におけるRNA結合タンパク質Mex3bの標的mRNAの同定とその機能解析2009

    • Author(s)
      川名貴洋、高田仁実、伊藤弓弦、浅島誠、平良眞規
    • Organizer
      第32回分子生物学会年会
    • Place of Presentation
      横浜パシフィコ、横浜市
    • Related Report
      2009 Annual Research Report
  • [Presentation] 脊椎動物の原腸胚オーガナイザーにおける転写制御機構とその進化的起源(シンポジウム「転写調節と生体機能」)2009

    • Author(s)
      平良眞規
    • Organizer
      第82回日本生化学会大会
    • Place of Presentation
      神戸国際会議場、神戸市(招待口演)
    • Related Report
      2009 Annual Research Report
  • [Presentation] Xenopus原腸胚オーガナイザーの転写因子群によるcerberus遺伝子の統合的な発現制御機構の解析2009

    • Author(s)
      須藤則広、平良眞規
    • Organizer
      第3回日本ツメガエル研究集会
    • Place of Presentation
      国民宿舎みやじま杜の宿、広島県甘日市市宮島町
    • Related Report
      2009 Annual Research Report
  • [Presentation] Evolutionarily conserved roles of the Lhx1/Ldb/Ssbp complex in the organizer from Nematostella to Xenopus (真正後生動物で進化的に保存されたLhx1/Ldb/Ssbp複合体のオーガナイザーにおける役割)2009

    • Author(s)
      Yuuri Yasuoka, Y.Goya, K.Akasaka, H.Saiga, M.Taira
    • Organizer
      日本発生生物学会第42回大会
    • Place of Presentation
      新潟朱鷺メッセ、新潟市
    • Related Report
      2009 Annual Research Report
  • [Presentation] Positive and negative regulation of an active gradient of Wnt by secreted Frizzled-related proteins in anteroposterior patterning (前後軸パターニングにおける分泌性Frizzled関連蛋白質によるWnt活性勾配の正と負の制御)2009

    • Author(s)
      Yusuke Mii, Masanori Taira
    • Organizer
      日本発生生物学会第42回大会
    • Place of Presentation
      新潟朱鷺メッセ、新潟市
    • Related Report
      2009 Annual Research Report
  • [Presentation] 脊椎動物原腸胚オーガナイザーの進化過程におけるオ「ガナイザー遺伝子lhx1とそのパラログlhx3の役割2008

    • Author(s)
      安岡有理 (他5名)
    • Organizer
      東京大学生命科学研究ネットワークシンポジウム2008
    • Place of Presentation
      東京大学
    • Year and Date
      2008-09-23
    • Related Report
      2008 Annual Research Report
  • [Presentation] 分泌性Frizzled関連蛋白質Frzb1及びCrescentの細胞外相互作用によるWnt拡散性の変化2008

    • Author(s)
      三井優輔 (他1名)
    • Organizer
      Xenopus若手ワークショップ
    • Place of Presentation
      徳島
    • Year and Date
      2008-05-27
    • Related Report
      2008 Annual Research Report
  • [Presentation] 眼の発生に関わる核内膜蛋白質Nemp 1と相互作用する因子の同定2008

    • Author(s)
      柴野卓志、儘田博志、伯野史彦、高橋伸一郎、古閑比佐志、平良眞規
    • Organizer
      第31回分子生物学会年会
    • Place of Presentation
      神戸
    • Related Report
      2009 Final Research Report
  • [Presentation] S Functional analysis of the RNA binding protein RKHD3 and its 3' long conserved untranslated region in Xenopus neural development2008

    • Author(s)
      高田仁実 (他6名)
    • Organizer
      日本発生生物学会第41回大会
    • Place of Presentation
      徳島
    • Related Report
      2008 Annual Research Report
  • [Presentation] Protein evolution of the LIM-homeodomain transcription factors Lhx1 and Lhx3 in acouisition of the vertebrate gastrula organizer2008

    • Author(s)
      安岡有理 (他5名)
    • Organizer
      日本発生生物学会第41回大会
    • Place of Presentation
      徳島
    • Related Report
      2008 Annual Research Report
  • [Presentation] Secreted Frizzled-related proteins, Frzbl and Crescent, alter diffu: vity of Wnt ligands through extracellular interactions2008

    • Author(s)
      三井優輔 (他1名)
    • Organizer
      日本発生生物学会第41回大会
    • Place of Presentation
      徳島
    • Related Report
      2008 Annual Research Report
  • [Presentation] 分泌性Frizzled関連蛋白質によるWntの拡散性の上昇とシグナル範囲の拡大2008

    • Author(s)
      三井優輔 (他1名)
    • Organizer
      日本動物学会第79回夫会
    • Place of Presentation
      福岡
    • Related Report
      2008 Annual Research Report
  • [Presentation] The role of the transactivation domain CCR2 of the LIM homeodomain protein Xlim-1 in the Spemann?Mangold organizer2008

    • Author(s)
      Goya, Yuuki (他4名)
    • Organizer
      The 12th International Xenopus Conference
    • Place of Presentation
      Germany, Leiwen
    • Related Report
      2008 Annual Research Report
  • [Presentation] Secreted Frizzled?related proteins enhance diffusion of Wnt and expand its signaling area (invited speaker)2008

    • Author(s)
      Taira, Masanori
    • Organizer
      The 12th International Xenopus Conference
    • Place of Presentation
      Germahy, Leiwen
    • Related Report
      2008 Annual Research Report
  • [Presentation] Evolutionary roots of blastoporal expression and 'organizer' activity of the vertebrate gastrula organizer gene lhxl and its ancient metazoan paralog lhx32008

    • Author(s)
      Yasuoka, Yuuri (他5名)
    • Organizer
      The 8th NIBB-EMBL Joint Meeting "Evolution: Genomes, Cell Types and Shapes"
    • Place of Presentation
      岡崎
    • Related Report
      2008 Annual Research Report
  • [Presentation] 眼の発生に関わる核内膜蛋白質Nemp1と相互作用する因子の同定2008

    • Author(s)
      柴野卓志 (他5名)
    • Organizer
      第31回日本分子生物学会年会
    • Place of Presentation
      神戸ポートアイランド
    • Related Report
      2008 Annual Research Report
  • [Presentation] T-box型転写因子VegTとオーガナイザー特異的転写因子による協調的なXenopus cerberus遺伝子の発現制御2008

    • Author(s)
      須藤則広 (他2名)
    • Organizer
      第31回日本分子生物学会年会
    • Place of Presentation
      神戸ポートアイランド
    • Related Report
      2008 Annual Research Report
  • [Presentation] アフリカツメガエル初期眼発生における新規核膜タンパク質 Nemp1 の解析2007

    • Author(s)
      儘田博志, 柴野卓志, 他4名
    • Organizer
      第30回分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2007-12-12
    • Related Report
      2007 Annual Research Report
  • [Presentation] Identification and functional analyses of uncharacterized neural genes in Xenopus early development2007

    • Author(s)
      M. Taira
    • Organizer
      International Symposium on Advanced Functional Genomics
    • Place of Presentation
      かずさ
    • Year and Date
      2007-10-11
    • Related Report
      2007 Annual Research Report
  • [Presentation] Analysis of a novel nuclear envelope protein, Nemp1, in early Xenopus eye development2007

    • Author(s)
      H. Mamada, 他5名
    • Organizer
      International Symposium on Advanced Functional Genomics
    • Place of Presentation
      かずさ
    • Year and Date
      2007-10-11
    • Related Report
      2007 Annual Research Report
  • [Presentation] アフリカツメガエル初期眼発生における新規核膜タンパク質Nemp 1の解析2007

    • Author(s)
      儘田博志、柴野卓志、伯野史彦、高橋伸一郎、古閑比佐志、平良眞規
    • Organizer
      第30回分子生物学会年会
    • Place of Presentation
      横浜
    • Related Report
      2009 Final Research Report
  • [Presentation] Analysis of a novel nuclear envelope protein, Nempl, in early Xenopus eye development2007

    • Author(s)
      H.Mamada, T.Shibano, F.Hakuno, S.-I.Takahashi, H.Koga, M.Taira
    • Organizer
      International Symposium on Advanced Functional Genomics
    • Place of Presentation
      Kazusa
    • Related Report
      2009 Final Research Report
  • [Remarks] ホームページ

    • URL

      http://www.biol.s.u-tokyo.ac.jp/users/1mb/index.php

    • Related Report
      2009 Final Research Report
  • [Remarks]

    • URL

      http://www2.biol.s.u-tokyo.ac.jp/users/lmb/index.php

    • Related Report
      2009 Annual Research Report

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Published: 2007-04-01   Modified: 2016-04-21  

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