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Which of andosol's components can adsorb DNA molecules

Research Project

Project/Area Number 19380044
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Plant nutrition/Soil science
Research InstitutionKyushu University

Principal Investigator

SAEKI Kazutoshi  Kyushu University, 生物環境調節センター, 准教授 (30284780)

Co-Investigator(Kenkyū-buntansha) WADA Shin-ichiro  九州大学, 農学研究院, 教授 (60108678)
SAKAI Masao  鹿児島大学, 農学部, 教授 (20225775)
KUNITO Takashi  信州大学, 理学部, 准教授 (90304659)
Project Period (FY) 2007 – 2009
Project Status Completed (Fiscal Year 2009)
Budget Amount *help
¥17,810,000 (Direct Cost: ¥13,700,000、Indirect Cost: ¥4,110,000)
Fiscal Year 2009: ¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Fiscal Year 2008: ¥5,720,000 (Direct Cost: ¥4,400,000、Indirect Cost: ¥1,320,000)
Fiscal Year 2007: ¥6,890,000 (Direct Cost: ¥5,300,000、Indirect Cost: ¥1,590,000)
KeywordsDNA / 吸着 / 黒ボク土 / アロフェン / 土壌化学 / 土壌粒子 / 酸化物 / pH影響 / イオン強度 / 土壤粒子
Research Abstract

This study investigated the adsorptions of DNA molecules by real soils and variable-charged soil constituents such as goethite, allophane, and humic acids for understanding risk assessment for release of the genetically modified organisms and for development of DNA extraction efficiency from soils in the analysis of soil microbial communities using culture-independent methods. The DNA adsorption on an andosol used in this study was much larger than those on a fluvisol and an acrisol. The changes in DNA adsorptions by the decrease in organic matter and oxide minerals implied that these oxide minerals among soil constituents are one of the main media to adsorb DNA molecules in soil environments. The adsorptions of DNA by andosols and allophane were investigated as function of solution pH, ionic strength in solution and some solutes. These results suggested that there are several DNA adsorption mechanisms in soil.

Report

(4 results)
  • 2009 Annual Research Report   Final Research Report ( PDF )
  • 2008 Annual Research Report
  • 2007 Annual Research Report
  • Research Products

    (29 results)

All 2010 2009 2008 2007 Other

All Journal Article (19 results) (of which Peer Reviewed: 14 results) Presentation (10 results)

  • [Journal Article] Effects of pH, ionic strength, and solutes on DNA adsorption2010

    • Author(s)
      Saeki, et al.
    • Journal Title

      Biol. Fertil. Soils (In press)

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The influence of soil organic matter on DNA adsorptions on andosols.2009

    • Author(s)
      Saeki K., M Sakai
    • Journal Title

      Microbes and Environments. 24

      Pages: 175-179

    • NAID

      10025920383

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Saeki Fluoride removal by a variety of minerals in aqueous phase.2009

    • Author(s)
      T-K. Oh, K.
    • Journal Title

      Clay Sci. 14

      Pages: 111-116

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Estimating sorption affinities of heavy metals on humic acid and silica using constant capacitance model.2009

    • Author(s)
      Saeki, K.T. Kunito
    • Journal Title

      Commun. Soil Sci. Plant Anal. 40

      Pages: 3252-3262

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] 黒ボク土へのDNA吸着に対する土壌有機物削減処理の影響2009

    • Author(s)
      佐伯和利・森田崇嗣・境雅夫
    • Journal Title

      九大農学芸雑誌 64

      Pages: 31-37

    • NAID

      120001164472

    • Related Report
      2009 Final Research Report
  • [Journal Article] Estimating sorption affinities of heavy metals on humic acid and silica using a constant capacitance model.2009

    • Author(s)
      K.Saeki, T.Kunito
    • Journal Title

      Commun Soil Sci. Plant Analysis. 40

      Pages: 3252-3262

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The influence of soil organic matter on DNA adsorptions on andosols2009

    • Author(s)
      K.Saeki, M.Sakai
    • Journal Title

      Microbes Environ. 24

      Pages: 175-179

    • NAID

      10025920383

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 黒ボク土へのDNA吸着に対する土壌有機物削除処理の影響2009

    • Author(s)
      佐伯和利, 森田崇嗣, 境雅夫
    • Journal Title

      九大農学芸誌 64

      Pages: 31-36

    • Related Report
      2008 Annual Research Report
  • [Journal Article] The effects of hydrogen peroxide and acid oxalate treatments on DNA adsorption on soils.2008

    • Author(s)
      Saeki K., M Morisaki, M Sakai
    • Journal Title

      Microbes and Environments. 23

      Pages: 353-355

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Adsorption Sequence of Toxic Inorganic Anions on a Soil.2008

    • Author(s)
      Saeki K.
    • Journal Title

      Bull. Environ. Contam. Toxicol. 81

      Pages: 508-512

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] The comparison of arsenite and arsenate adsorption on an andosol.2008

    • Author(s)
      Saeki K.
    • Journal Title

      Soil Science 173

      Pages: 248-256

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] 無機ヒ素塩の土壌への吸着特性2008

    • Author(s)
      佐伯和利
    • Journal Title

      九大農学芸雑誌 63

      Pages: 133-140

    • NAID

      120001040905

    • Related Report
      2009 Final Research Report
  • [Journal Article] Adssorption sequence of toxic inorganic anions on a soil.2008

    • Author(s)
      Kazutoshi SAEKI
    • Journal Title

      Bull. Environ. Contam. Toxicol. 81

      Pages: 508-512

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The contribution of soil constituents to adsorption of extracellular DNA by soils2008

    • Author(s)
      K. Saeki, M. Morisaki, M. Sakai
    • Journal Title

      Microbes Environ. 23

      Pages: 353-355

    • NAID

      110007005110

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The comparison of arsenite and arsenate adsorptionon an andosol.2008

    • Author(s)
      Kazutoshi SAEKI
    • Journal Title

      Soil Science 173(in press)

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Estimating sorption affinities of heavy metals on humic acid and silica using constant capacitance model.2008

    • Author(s)
      K. Saeki, T. Kunito
    • Journal Title

      Commun.in Soil Sci, &Plant Anal. 39(in press)

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 土壌生態系における細胞外DNA分子の挙動第1部:土壌および土壌構成物質へのDNA分子の吸着

    • Author(s)
      佐伯和利・境雅夫・國頭恭
    • Journal Title

      土と微生物 (印刷中)

    • NAID

      110009468728

    • Related Report
      2009 Final Research Report
  • [Journal Article] 土壌生態系における細胞外DNA分子の挙動第2部:細胞外DNA分子の安定性と形質転換能

    • Author(s)
      佐伯和利・國頭恭・境雅夫
    • Journal Title

      土と微生物 (印刷中)

    • NAID

      110009468805

    • Related Report
      2009 Final Research Report
  • [Journal Article] Effects of pH, ionic strength, and solutes on DNA adsorption by andosols

    • Author(s)
      Saeki K., T Kunito, M Sakai
    • Journal Title

      Biology and Fertility of Soils (in press)

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Presentation] アロフェンへのDNA分子の吸・脱着2009

    • Author(s)
      佐伯和利・境雅夫
    • Organizer
      日本土壌肥料学会
    • Place of Presentation
      京都大学
    • Year and Date
      2009-09-15
    • Related Report
      2009 Annual Research Report
  • [Presentation] 天然・合成アロフェンへのDNA分子の吸着2009

    • Author(s)
      佐伯和利・境雅夫
    • Organizer
      第53回粘土科学討論会
    • Place of Presentation
      岩手大学
    • Related Report
      2009 Final Research Report
  • [Presentation] アロフェンへのDNA分子の吸・脱着2009

    • Author(s)
      佐伯和利・境雅夫
    • Organizer
      日本土壌肥料学会2009年度京都大会
    • Related Report
      2009 Final Research Report
  • [Presentation] 土壌と腐植酸へのDNAの吸着2009

    • Author(s)
      井表靖貴・國頭恭・久保浩義・境雅夫・佐伯和利
    • Organizer
      日本土壌肥料学会2009年度京都大会
    • Related Report
      2009 Final Research Report
  • [Presentation] 土壌へのDNA吸着と土壌理化学性との関係2008

    • Author(s)
      佐伯和利, 森崎真由美, ○森田崇嗣, 濱田淳美, 境 雅夫
    • Organizer
      日本土壌肥料学会
    • Place of Presentation
      名古屋市立大学
    • Year and Date
      2008-09-09
    • Related Report
      2008 Annual Research Report
  • [Presentation] Saeki DNA adsorptions on andosols and allophane minerals.2008

    • Author(s)
      Sakai, M., S-I. Wada, K.
    • Organizer
      5th International Conference Interfaces against Pollution 2008
    • Place of Presentation
      Kyoto, Japan
    • Related Report
      2009 Final Research Report
  • [Presentation] Saeki Interactions of extracellular DNA with soil components in andosols2008

    • Author(s)
      Sakai, M., K.
    • Organizer
      12th International symposium on microbial ecology
    • Place of Presentation
      Cairns, Australia
    • Related Report
      2009 Final Research Report
  • [Presentation] 土壌へのDNA吸着と土壌理化学性との関係2008

    • Author(s)
      佐伯和利・森崎真由美・森田崇嗣・廣田淳美・境雅夫
    • Organizer
      日本土壌肥料学会2008年度愛知大会
    • Related Report
      2009 Final Research Report
  • [Presentation] 各種土壤構成成分によるDNAの吸着2007

    • Author(s)
      森崎 真由美・○佐伯 和利・濱浜田 淳美・境 雅夫
    • Organizer
      日本土壤肥料学会
    • Place of Presentation
      東京農学大学世田谷キャンパス
    • Year and Date
      2007-08-22
    • Related Report
      2007 Annual Research Report
  • [Presentation] 各種土壌成分によるDNAの吸着2007

    • Author(s)
      森崎真由美・佐伯和利・廣田淳美・境雅夫
    • Organizer
      日本土壌肥料学会2007年度東京大会
    • Related Report
      2009 Final Research Report

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Published: 2007-04-01   Modified: 2016-04-21  

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