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Studies for biosynthesis mechanism of natural chitin polymorphism

Research Project

Project/Area Number 19380097
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field 林産科学・木質工学
Research InstitutionThe University of Tokyo

Principal Investigator

KIMURA Satoshi  The University of Tokyo, 大学院・農学生命科学研究科, 助教 (00420224)

Co-Investigator(Kenkyū-buntansha) SAITO Yukie  東京大学, 大学院・農学生命科学研究科, 准教授 (30301120)
HORIUTI Hiroyuki  東京大学, 大学院・農学生命科学研究科, 准教授 (00209280)
WADA Wasahisa  東京大学, 大学院・農学生命科学研究科, 准教授 (40270897)
KUGA Shigenori  東京大学, 大学院・農学生命科学研究科, 教授 (60012051)
GOTO Taichitou  三重大学, 教育学部, 教授 (90183813)
Project Period (FY) 2007 – 2009
Project Status Completed (Fiscal Year 2009)
Budget Amount *help
¥19,630,000 (Direct Cost: ¥15,100,000、Indirect Cost: ¥4,530,000)
Fiscal Year 2009: ¥3,120,000 (Direct Cost: ¥2,400,000、Indirect Cost: ¥720,000)
Fiscal Year 2008: ¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2007: ¥11,440,000 (Direct Cost: ¥8,800,000、Indirect Cost: ¥2,640,000)
Keywords天然キチン / α-キチン / β-キチン / Phaeocystis / ハオリムシ / Spadella / α-chitin / β-chitin / C^<13>固体NMR / 細胞壁 / Aspergillus / サツマハオリムシ / シンクロトロン放射光 / αキチン / βキチン
Research Abstract

In the research, various chitin samples were collected and their structural analysis was achieved to understand a mechanism for biosynthesis of natural chitin polymorphs. Highly crystalline α-chitin obtained by mass cultivation of Phaeocystis enabled highly precise analysis of X-ray diffraction as well as solid-state NMR. The results lead to precise determination of αchitin unit cell. However, several minor signals which cannot be explained by the published model, suggesting possibility of larger unit cell. X-ray diffraction and electron microscopy analyses of crystalline β-chitin in tubes Lamellibrachia revealed that the microfibrils have a three dimensional orientation in the tube wall. This alignment can be ascribed to possible biosynthetic mechanism of this chitin, i.e. chitin-synthesizing enzymes travelling one-way, consistent with the motion of the worm body in the tube. The crystal transition between the dihydrate and anhydrous forms of β-chitin was also monitored by synchrotron X-ray diffraction under controlled relative humidity, the results revealed the crystal transition between the dihydrate and anhydrous forms was shown to take place reversibly through an intermediate structure, the monohydrate form, showing a large hysteresis.

Report

(4 results)
  • 2009 Annual Research Report   Final Research Report ( PDF )
  • 2008 Annual Research Report
  • 2007 Annual Research Report
  • Research Products

    (16 results)

All 2010 2009 2008 2007

All Journal Article (7 results) (of which Peer Reviewed: 4 results) Presentation (9 results)

  • [Journal Article] Crystal transition between hydrate and anhydrous β-chitin monitored by synchrotron X-ray fiber diffraction.2010

    • Author(s)
      Kobayashi K, Kimura S, Togawa E, Wada M
    • Journal Title

      Carbohydrate Polymers 79

      Pages: 882-889

    • Related Report
      2009 Final Research Report
  • [Journal Article] Crystal analysis and high-resolution imaging of microfibrillar α-chitin from Phaeocystis.2010

    • Author(s)
      Ogawa Y, Kimura S, Wada M, Kuga S
    • Journal Title

      Journal of Structural Biology (in press)

    • Related Report
      2009 Final Research Report
  • [Journal Article] Crystal transition between hydrate and anhydrous β-chitin monitored by synchrotron X-ray fiber diffraction.2010

    • Author(s)
      Kobayashi K, Kimura S, Togawa E, Wada M.
    • Journal Title

      Carbohydrate Polymers 79

      Pages: 882-889

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Crystal transition between hydrate and anhydrous β-chitin monitored by synchrotron X-ray fiber diffraction2010

    • Author(s)
      Kobayashi K, Kimura S, Togawa E, Wada M.
    • Journal Title

      Carbohydrate Polymers 79

      Pages: 882-889

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Revisit of α-chitin crystal structure using high resolution X-ray diffraction data.2009

    • Author(s)
      Sikorski P, Hori R, Wada M
    • Journal Title

      Biomacromolecules 10

      Pages: 1100-1105

    • Related Report
      2009 Final Research Report
  • [Journal Article] 凍結割断法により植物細胞壁の形態形成を探る2008

    • Author(s)
      木村 聡
    • Journal Title

      顕微鏡 43

      Pages: 35-39

    • NAID

      10021151737

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Cellulose nanofibers prepared by TEMPO-mediated oxidation of native cellulose2007

    • Author(s)
      Saito, T., Kimura, S., Nishivama H., Isogai, A.
    • Journal Title

      Biomacromolecules 8

      Pages: 2485-2491

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Presentation] 水の吸脱着によるβ-キチンの結晶転移2009

    • Author(s)
      小林加代子, 木村聡, 和田昌久, 空閑重則
    • Organizer
      第23回キチン・キトサンシンポジウム
    • Place of Presentation
      佐賀大学本庄キャンパス
    • Year and Date
      2009-08-21
    • Related Report
      2009 Annual Research Report 2009 Final Research Report 2008 Annual Research Report
  • [Presentation] ヤムシで見つかったキチン合成遺伝子ホモログ2009

    • Author(s)
      原正人, 木村聡, 渡邊宇外, 河野信, 後藤太一郎
    • Organizer
      第23回キチン・キトサンシンポジウム
    • Place of Presentation
      佐賀大学本庄キャンパス
    • Year and Date
      2009-08-21
    • Related Report
      2009 Annual Research Report 2009 Final Research Report 2008 Annual Research Report
  • [Presentation] ハオリムシ棲管の形態と構造-生合成機構に関する一考察-2009

    • Author(s)
      木村聡, 小林加代子, 和田昌久, 空閑重則
    • Organizer
      第23回キチン・キトサンシンポジウム
    • Place of Presentation
      佐賀大学本庄キャンパス
    • Year and Date
      2009-08-20
    • Related Report
      2009 Annual Research Report 2009 Final Research Report 2008 Annual Research Report
  • [Presentation] ハプト藻Phaeocystisが生産するキチンミクロフィブリルの構造2009

    • Author(s)
      小川悠, 木村聡, 和田昌久, 空閑重則, 戸川英二
    • Organizer
      セルロース学会大16回年次会
    • Place of Presentation
      北海道大学学術交流会館
    • Year and Date
      2009-07-02
    • Related Report
      2009 Final Research Report
  • [Presentation] ハプト藻Phaeocystisが生産するキチンミクロフィブリルの構造2009

    • Author(s)
      小川悠、木村聡、和田昌久、空閑重則、戸川英二
    • Organizer
      セルロース学会大16回年次大会
    • Place of Presentation
      北海道大学学術交流会館
    • Year and Date
      2009-07-02
    • Related Report
      2009 Annual Research Report
  • [Presentation] ハプト藻 Phaeocystis が生産するキチンミクロフィブリルの構造2009

    • Author(s)
      小川悠, 木村聡, 和田昌久, 空閑重則, 戸川英二
    • Organizer
      セルロース学会大16回年次大会
    • Place of Presentation
      北海道大学学術交流会館
    • Year and Date
      2009-07-02
    • Related Report
      2008 Annual Research Report
  • [Presentation] ハオリムシ・キチンの形態と構造2008

    • Author(s)
      木村聡
    • Organizer
      セルロース学会第15回年次大会
    • Place of Presentation
      京都大学桂キャンパス
    • Year and Date
      2008-07-11
    • Related Report
      2009 Final Research Report
  • [Presentation] Biogenesis of cellulose in the Appendicularians2007

    • Author(s)
      木村 聡
    • Organizer
      2ndInternational Cellulose Conference
    • Place of Presentation
      タワーホール船堀(東京)
    • Year and Date
      2007-10-20
    • Related Report
      2007 Annual Research Report
  • [Presentation] イカキチンの結晶多形2007

    • Author(s)
      木村聡, 和田昌久, 村上淳, 空閑重則
    • Organizer
      セルロース学会第14回年次大会
    • Place of Presentation
      岡大学大学会館
    • Year and Date
      2007-07-19
    • Related Report
      2009 Final Research Report

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Published: 2007-04-01   Modified: 2016-04-21  

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