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Integrated functional analysis of non-coding RNA in periodontal diseases -Focusing on interaction between bacteria and host

Research Project

Project/Area Number 19390478
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Pathobiological dentistry/Dental radiology
Research InstitutionOkayama University

Principal Investigator

KOKEGUCHI Susumu  Okayama University, 大学院・医歯薬学総合研究科, 准教授 (10144776)

Co-Investigator(Kenkyū-buntansha) MAEDA Hiroshi  岡山大学, 大学院・医歯薬学総合研究科, 准教授 (00274001)
YAMAMOTO Tatsuo  神奈川歯科大学, 社会歯科学講座歯科医療社会学分野, 講師 (20252984)
MURAKAMI Jun  岡山大学, 大学院・医歯薬学総合研究科, 助教 (40362983)
KARIYAMA Reiko  岡山大学, 大学院・医歯薬学総合研究科, 助教 (40112148)
TAMAKI Naofumi  岡山大学, 大学院・医歯薬学総合研究科, 助教 (20335615)
NISHIMURA Fusanori  広島大学, 大学院・医歯薬学総合研究科, 教授 (80208222)
Research Collaborator WATANABE Akari  岡山大学, 大学院・医歯薬学総合研究科
YACHIE Nozomi  慶應義塾大学・日本学術振興会, 先端生命科学研究所, 博士研究員・特別研究員
Project Period (FY) 2007 – 2009
Project Status Completed (Fiscal Year 2009)
Budget Amount *help
¥19,110,000 (Direct Cost: ¥14,700,000、Indirect Cost: ¥4,410,000)
Fiscal Year 2009: ¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2008: ¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2007: ¥10,530,000 (Direct Cost: ¥8,100,000、Indirect Cost: ¥2,430,000)
Keywords免疫・感染・炎症 / 非翻訳RNA / 歯周病細菌 / Aggregatibacter actinomycetemcomitans / Porphyromonas gingivalis / 宿主細胞 / non-coding RNA / Porphvromonas gingivalis / Aggregatibacter actinomyctemcomitans / 歯周病
Research Abstract

Non-coding RNAs and RNA chaperone proteins such as Hfq or CsrA/RsmA in periodontopathic bacteria, Aggregatibacter actinomycetemcomitas and Porphyromonas gingivalis were identified using computational prediction analysis and molecular experimental-based approaches, shotgun cloning. The expression patterns of ncRNAs in human gingival fibroblasts with bacterial lipopolysaccharide were also analyzed by microarray.

Report

(4 results)
  • 2009 Annual Research Report   Final Research Report ( PDF )
  • 2008 Annual Research Report
  • 2007 Annual Research Report
  • Research Products

    (47 results)

All 2010 2009 2008 2007 Other

All Journal Article (24 results) (of which Peer Reviewed: 23 results) Presentation (12 results) Book (3 results) Remarks (8 results)

  • [Journal Article] Rapid detection of mecA and spa by the loop-mediated isothermal amplification (LAMP) method.2010

    • Author(s)
      Koide Y, Maeda H, Yamabe K, Naruishi K, Yamamoto T, Kokeguchi S, Takashiba S
    • Journal Title

      Lett Appl Microbiol. 50(4)

      Pages: 386-92

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Antigenic group II chaperonin in Methanobrevibacter oralis may cross-react with human chaperonin CCT.2010

    • Author(s)
      Yamabe K, Maeda H, Kokeguchi S, Soga Y, Meguro M, Naruishi K, Asakawa S, Takashiba S.
    • Journal Title

      Mol Oral Microbiol. 25(2)

      Pages: 112-22

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Highly expressed genes in a rough-colony-forming phentype of Aggregatibacter actinomycetemcomi-tans: implication of a mip-like gene for the invasion of host tissue.2010

    • Author(s)
      Maeda T, Maeda H, Yamabe K, Mineshiba J, Tanimoto I, Yamamoto T, Naruishi K, Kokeguchi S, Takashiba S
    • Journal Title

      FEMS Immunol Med Microbiol. 58(2)

      Pages: 226-36

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Highly expressed genes in a rough-colony-forming phenotype of Aggregatibacter actinomycetemcomitans : implication of a mip-like gene for the invasion of host tissue.2010

    • Author(s)
      Maeda T, Maeda H, Yamabe K, et al.
    • Journal Title

      FEMS Immunol. Med. Microbiol. 58(2)

      Pages: 226-236

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Effects of obesity on gingival oxidative stress in a rat model.2009

    • Author(s)
      Tomofuji T, Yamamoto T, Tamaki N, Ekuni D, Azuma T, Sanbe T, Irie K, Kasuyama K, Umakoshi M, Murakami J, Kokeguchi S, Morita M
    • Journal Title

      J Periodontol. 80(8)

      Pages: 1324-9

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Vitamin C intake attenuates the degree of experimental atherosclerosis induced by periodontitis in the rat by decreasing oxidative stress.2009

    • Author(s)
      Ekuni D, Tomofuji T, Sanbe T, Irie K, Azuma T, Maruyama T, Tamaki N, Murakami J, Kokeguchi S, Yamamoto T
    • Journal Title

      Arch Oral Biol. 54(5)

      Pages: 495-502

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Periodontitis-induced lipid eroxidation in t descending aorta is involved in the initiation of atherosclerosis.2009

    • Author(s)
      Ekuni D, Tomofuji T, Sanbe T, Irie K, Azuma T, aruyamaT, Tamaki N, Murakami J, Kokeguchi S, Yamamoto T
    • Journal Title

      J Periodontal Res. 44(4)

      Pages: 434-42

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Effects of vitamin C intake on gingival oxidative stress in rat periodontitis.2009

    • Author(s)
      Tomofuji T, kuni D, Sanbe T, Irie K, Azuma T, Maruyama T, Tamaki N, Murakami J, Kokeguchi S, Yamamoto T
    • Journal Title

      Free Radic Biol Med. 46(2)

      Pages: 163-8

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Effects of obesity on gingival oxidative stress in a rat model.2009

    • Author(s)
      Tomofuji T, Yamamoto T, Tamaki N, et al.
    • Journal Title

      J. Periodontol. 80(8)

      Pages: 1324-1329

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Periodontitis-induced lipid peroxidation in rat descending aorta is involved in the initiation of atherosclerosis.2009

    • Author(s)
      Ekuni D, Tomofuji T, Sanbe T, et al.
    • Journal Title

      J. Periodontal Res. 44(4)

      Pages: 434-442

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article]2009

    • Author(s)
      Murakami J, Asaumi J, Tsujigiwa H, Yamada M, Kokeguchi S, Nagatsuka H, Yamamoto T, Y-J Lee
    • Journal Title

      Drug Resistant Neoplasms : Role of O6-methyl guanine-DNA methyl transferase and the effect of O6-benzylguanine in cancer chemotherapy(Nova Science Publishers(Hauppauge, NY, USA))

    • Related Report
      2009 Annual Research Report
  • [Journal Article] Effects of vitamin C intake on gingival oxidative stress in ratperiodontitis.2009

    • Author(s)
      Tomofuji T, Ekuni D, Sanbe T, et al.
    • Journal Title

      Free Radic Biol Med. 46(2)

      Pages: 163-168

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Opr86 is essential for viability and is a potential candidate for a protective antigen against biofilm formation by Pseudomonas aeruginosa.2008

    • Author(s)
      Tashiro Y, Nomura N, Nakao R, Senpuku H, Kariyama R, Kumon H, Kosono S, Watanabe H, Nakajima T, Uchiyama H.
    • Journal Title

      J Bacteriol. 190(11)

      Pages: 3969-78

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Distribution of Archaea in Japanese patients with periodontitis and humoral immune response to the components.2008

    • Author(s)
      Yamabe K, Maeda H, Kokeguchi S, Tanimoto I, Sonoi N, Asakawa S, Takashiba S
    • Journal Title

      FEMS Microbiol Lett. 287(1)

      Pages: 69-75

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Rapid and simple detection of eight major periodontal pathogens by the loop-mediated isothermal amplification method.2008

    • Author(s)
      Miyagawa J, Maeda H, Murauchi T, et al.
    • Journal Title

      FEMS Immunol Med Microbiol. 53(3)

      Pages: 314-321

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Distribution of Archaea in Japanese patients with periodontitis and humoralimmune response to the components.2008

    • Author(s)
      Yamabe K, Maeda H, Kokeguchi s, et al.
    • Journal Title

      FEMS Microbiol Lett. 287(1)

      Pages: 69-75

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Macrophage-adipocyte interaction: marked interleukin-6 production by lipopolysaccharide.2007

    • Author(s)
      Yamashita, Soga Y, Iwamto Y, Yoshizawa S, H, KokeguS, Takashiba S, Nishimra F
    • Journal Title

      Obesity (Silver Spring). 15(11)

      Pages: 2549-52

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Relationship of periodontal infection to serum antibody levels to periodontopathic bacteria and inflammatory markers in periodontitis patients with coronary heart disease.2007

    • Author(s)
      Yamazaki K, Honda T, Domon H, Okui T, Kajita K, Amanuma R, Kudoh C, Takashiba S, Kokeguchi S, Nishimura F, Ko M, Aizawa Y, Oda H
    • Journal Title

      Clin Exp Immunol. 149(3)

      Pages: 445-52

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Depletion f O6-methylguanine-DNA methyltransferase by O6-ben enhances 5-FU cytotoxicity in colon and oral cancer cell lines.2007

    • Author(s)
      Murakami J, YJ, Kokeguchi S, Tsujigiwa H, AsaumiJ, Ngatsuka H, Fukui K, Kuroda M, Tanaka N, Matsubara N
    • Journal Title

      Oncol Rep. 17(6)

      Pages: 1461-7

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Tretment of Pseudomonas aeruginosa biofilms with a combination of fluoroquino fosfomycin in a ra infection model.2007

    • Author(s)
      Mikuniya T, Kato Y, Ida T, Maebashi K, Monden K, Kariyaa R, Kumon H
    • Journal Title

      J Infect Chemother. 13(5)

      Pages: 285-90

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Depletion of O6-methylguanine-DNA methyltransferase by O6-benzylguanine enhances 5-FU cytotoxicity in colon and oral cancer cell lines2007

    • Author(s)
      Murakami J, LeeY-J, Kokeguchi S, et. al.
    • Journal Title

      Oncology Reports 17(6)

      Pages: 1461-1467

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Macrophage-adipocyte interaction: Marked IL-6 production by co-cultures stimulated with LPS2007

    • Author(s)
      Yamashita A, Iwamoto Y, et. al.
    • Journal Title

      Obesity 15(11)

      Pages: 2549-2552

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Relationship of periodontal infection to serum antibody levels to periodontopathic bacteria and inflammatory markers in periodontitis patients with coronary heart disease2007

    • Author(s)
      Yamazaki K, Honda T, et. al.
    • Journal Title

      Clinical and Experimental lmmunology 149(3)

      Pages: 445-452

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Experimental and clinical studifluoroquinolone-insusceptible Escherichia coli isolated from patients with urinary tract infections from 1994 to 2007.

    • Author(s)
      Wada K, Kariyama R, Mitsuhata R, UeS, Watanabe T, Monden K, Kumon H.
    • Journal Title

      Acta M

    • NAID

      120002313204

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Presentation] Porphyro non-coding RNAの同定.2009

    • Author(s)
      石井真由美, 前田博史, 山部こころ, 園井教裕, 平井公人, 谷本一郎, 苔口進, 高柴正悟
    • Organizer
      第30回岡山歯学会総会・学術集会.
    • Place of Presentation
      岡山市・岡山大学歯学部.
    • Year and Date
      2009-11-08
    • Related Report
      2009 Final Research Report
  • [Presentation] ショットガンクローニング法によるPorphyromona small non-coding RNAの同定.2009

    • Author(s)
      山部こころ, 前田博史, 樋口彩子, 園井教裕目黒道生, 谷本一郎, 山本直史, 成石浩司, 苔口進, 高柴正悟
    • Organizer
      第52回秋季日本歯周病学会学術大会
    • Place of Presentation
      宮崎市・宮崎観光ホテル
    • Year and Date
      2009-10-11
    • Related Report
      2009 Final Research Report
  • [Presentation] ショットガンクローニング法によるPorphyromonas gingivalisからのsmallnon-coding RNAの同定2009

    • Author(s)
      山部こころ, 前田博史, 樋口彩子, 園井教裕, 目黒道生, 谷本一郎, 山本直史, 成石浩司, 苔口進, 高柴正悟
    • Organizer
      第52回秋季日本歯周病学会学術大会
    • Place of Presentation
      宮崎市・宮崎観光ホテル
    • Year and Date
      2009-10-11
    • Related Report
      2009 Annual Research Report
  • [Presentation] 尿路由来メタロ-β-ラクタマーゼ産生緑膿菌のバイオフィルム形成能および耐性遺伝子伝達性の検討2009

    • Author(s)
      狩山玲子
    • Organizer
      第83回日本感染症学会総会
    • Place of Presentation
      東京都新宿区・京王プラザホテル・エミネンスホール.
    • Year and Date
      2009-04-23
    • Related Report
      2009 Final Research Report
  • [Presentation] 歯周病細菌にRNAシャペロンの探索.2009

    • Author(s)
      苔口進, 渡辺朱理, 佐藤法仁, 谷本一郎
    • Organizer
      第82回日本細菌学会総会.
    • Place of Presentation
      名古屋市・名古屋国際会議場.
    • Year and Date
      2009-03-12
    • Related Report
      2009 Final Research Report
  • [Presentation] 歯周病細菌におけるsmall nonペロンの探索.2008

    • Author(s)
      苔口進, 渡辺朱理, 佐藤法仁
    • Organizer
      第61回日本細菌学会中国・四国支部総会
    • Place of Presentation
      松山市・愛媛大学グリーンホール.
    • Year and Date
      2008-10-08
    • Related Report
      2009 Final Research Report
  • [Presentation] 歯周病におけるsma11 non-coding RNAの機能解析2008

    • Author(s)
      苔口進, 渡辺朱理, 佐藤法に, 谷本一郎
    • Organizer
      第50回歯科基礎医学会学術大会
    • Place of Presentation
      東京TOC有明
    • Year and Date
      2008-09-25
    • Related Report
      2008 Annual Research Report
  • [Presentation] 歯周病におけるsmall non-coding RNAの機能解析-歯周病細菌とヒの発現様態-.2008

    • Author(s)
      苔口進, 渡辺朱理, 佐藤法仁, 谷本一郎
    • Organizer
      第50回歯科基礎医学会総会
    • Place of Presentation
      東京都江東区・TOC有明コンベンションホール
    • Year and Date
      2008-09-23
    • Related Report
      2009 Final Research Report
  • [Presentation] 緑膿菌性バイオフィルムに対するフルオロキノロン系薬の併用効果に関する新知見.2007

    • Author(s)
      狩山玲子
    • Organizer
      第55回日本化学療法学会西日本支部総会
    • Place of Presentation
      神戸市・神戸国際会議場
    • Year and Date
      2007-10-31
    • Related Report
      2009 Final Research Report
  • [Presentation] Prevotella intermedia ATCC 25611の20k Da外膜蛋白の性状について2007

    • Author(s)
      苔口 進, 渡辺朱理, 谷本一郎, 福井一博
    • Organizer
      第60回日本細菌学会中国・四国支部総会
    • Place of Presentation
      総社市,岡山県立大学
    • Year and Date
      2007-10-12
    • Related Report
      2007 Annual Research Report
  • [Presentation] Aggregatibacter(Actinobacillus) actino- mycetemcomitansからのsmall non-coding RNAならびにRNAシャペロンの同定.2007

    • Author(s)
      前田博史, 苔口進, 谷本一郎, 小出康史, 山部こころ, 園井教裕, 新井英雄, 高柴正悟
    • Organizer
      第春季日本歯周病学会学術大会
    • Place of Presentation
      横須賀市・横須賀芸術劇場・横須賀市産業交流プラザ・ホテルトリニティ横須賀.
    • Year and Date
      2007-05-18
    • Related Report
      2009 Final Research Report
  • [Presentation] 低濃度LPSにより脂肪細胞・マクロファージ共培養系から産生される分子のサイトカインアレイ解析.

    • Author(s)
      山下明子, 西村英紀, 曽我賢彦, 岩本義博, 苔口進, 高柴正悟
    • Organizer
      第50季日本歯周病学会学術
    • Place of Presentation
      須賀市・横須場・横須賀市産業交流プラザ・ホテルトリニティ横須賀
    • Related Report
      2009 Final Research Report
  • [Book] Drug Resistant Neoplasms: Role of O6-met guanine-DNA methyl transferase and the effect of O6-benzylguanine in cancer chemotherapy.2009

    • Author(s)
      Murakami J, Asaumi J, Tsujigiwa H, Yamada M, Kokeguchi S, Nagatsuka H, Yamamoto T, Y-J Lee
    • Total Pages
      254
    • Publisher
      Nova Science Publishers (Hauppauge, NY, USA)
    • Related Report
      2009 Final Research Report
  • [Book] Preventive Periodontology臨床を支えるサイエンスを知る・唾液検査を活用する2007

    • Author(s)
      前田博史、苔口 進、高柴正悟
    • Total Pages
      373
    • Publisher
      医歯薬出版株式会社
    • Related Report
      2007 Annual Research Report
  • [Book] Preventive Periodontology臨床を支えるサイエンスを知る・唾液検査を活用する・生活習慣病を予防する. 第4章歯周病ァクター) 1-バイオフィル場から(菌と菌のイン

    • Author(s)
      前田博史, 苔口進, 高柴正悟
    • Total Pages
      373
    • Publisher
      医歯薬出版株式会社(東京)
    • Related Report
      2009 Final Research Report
  • [Remarks]

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      http://www.gesaikin/result

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      2009 Final Research Report
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      http://www.okayaseki/index.html

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      2009 Final Research Report
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      http://www.geocities.jp/okayama_u_dent_saikin/result.html.

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      2009 Annual Research Report
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    • URL

      http://www.okayama-u.ac.jp/user/med/Gyoseki/index.html

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      2009 Annual Research Report
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    • URL

      http://vww.geocities.jp/okavama_u_dent_saikin/result.html

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      2008 Annual Research Report
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      http://www.okayama-u.ac.jp/user/med/Gyoseki/index.html

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      2008 Annual Research Report
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      http://www.geocities.jp/okayama_u_dent_saikin/result.html

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      2007 Annual Research Report
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      http://www.okayama-u.ac.jp/user/med/Gyoseki/index.html

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      2007 Annual Research Report

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Published: 2007-04-01   Modified: 2016-04-21  

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