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Development of novel compound of function selective labeling reagent for proteins and its systematic use

Research Project

Project/Area Number 19685015
Research Category

Grant-in-Aid for Young Scientists (A)

Allocation TypeSingle-year Grants
Research Field Chemistry related to living body
Research InstitutionHokkaido University

Principal Investigator

HINOU Hiroshi  Hokkaido University, 大学院・先端生命科学研究院, 助教 (70333333)

Project Period (FY) 2007 – 2009
Project Status Completed (Fiscal Year 2009)
Budget Amount *help
¥13,390,000 (Direct Cost: ¥10,300,000、Indirect Cost: ¥3,090,000)
Fiscal Year 2009: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Fiscal Year 2008: ¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2007: ¥7,280,000 (Direct Cost: ¥5,600,000、Indirect Cost: ¥1,680,000)
Keywords自殺基質 / 機能選択的 / 特異的阻害 / 触媒部位の同定 / ラベル化 / 非特異的阻害 / 活性化速度 / シアリダーゼ / 阻害剤 / 特異性 / 分子設計 / 環状構造 / 機能選択的ラベル化 / 活性加速度
Research Abstract

I have tried to develop a novel method of inhibitor design of such enzymes exemplified to a neuraminidase Vibrio cholerae neuraminidase (VCNA) of which crystal structure was reported in 1994 and most potent inhibitor was reported in 1971. As a result, a potent inhibitor for Vibrio cholerae neuramnidase was developed using mechanism-based labeling information of key amino acid residues, design of a skeleton of focused library based on labeling information, screening of the focused library, and elimination of promiscuous inhibitor by detergent-based assay to afford potent (Ki=73nM) and selective inhibitor among viral, bacterial, and mammal neuraminidases.

Report

(4 results)
  • 2009 Annual Research Report   Final Research Report ( PDF )
  • 2008 Annual Research Report
  • 2007 Annual Research Report
  • Research Products

    (51 results)

All 2010 2009 2008 2007 Other

All Journal Article (20 results) (of which Peer Reviewed: 5 results) Presentation (26 results) Remarks (1 results) Patent(Industrial Property Rights) (4 results)

  • [Journal Article] Lucia Mendonca-Previato, Jose O Previato, Adriane R Todeschini "A new class of mechanism-based inhibitors for Trypanosoma cruzi trans-sialidase and their influence on parasite virulence"2010

    • Author(s)
      Sebastiao T Carvalho, Mauro Sola-Penna, Isadora A Oliveira, Samuel Pita, Arlan S Goncalves, Bianca C Neves, Francisco R Sousa, Leonardo Freire-de-Lima, Masaki Kurogochi, Hiroshi Hinou, Shin-Ichiro Nishimura
    • Journal Title

      Glycobiology. (in press)

    • Related Report
      2009 Final Research Report
  • [Journal Article] Potent inhibitor scaffold against Trypanosoma cruzi trans-sialidase2010

    • Author(s)
      Shingo Arioka, Masahiro Sakagami, Rie Uematsu, Hiroto Yamaguchi, Hiroko Togame, Hiroshi Takemoto, Hiroshi Hinou, Shin-Ichiro Nishimura
    • Journal Title

      Bioorganic & Medicinal Chemistry 18

      Pages: 1633-1640

    • Related Report
      2009 Final Research Report
  • [Journal Article] A new class of mechanism-based inhibitors for Trypanosoma cruzi trans-sialidase and their influence on parasite virulence2010

    • Author(s)
      Sebastiao T Carvalho, Mauro Sola-Penna, Isadora A Oliveira, Samuel Pita, Arlan S Goncalves, Bianca C Neves, Francisco R Sousa, Leonardo Freire-de-Lima, Masaki Kurogochi, Hiroshi Hinou, Shin-Ichiro Nishimura, Lucia Mendonca-Previato, Jose O Previato, Adriane R Todeschini
    • Journal Title

      Glycobiology (In press)

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mechanism-based Probing, Characterization, and Inhibitor Design of Glycosidases and Glycosyltransferases2010

    • Author(s)
      Hiroshi Hinou, Hirokazu Kai, Shin-Ichiro Nishimura
    • Journal Title

      Methods in Molecular Biology (In press)

    • Related Report
      2009 Annual Research Report
  • [Journal Article] Potent inhibitor scaffold against Trypanosoma cruzi trans-sialidase2010

    • Author(s)
      Shingo Arioka, Masahiro Sakagami, Rie Uematsu, Hiroto Yamaguchi, Hiroko Togame, Hiroshi Takemoto, Hiroshi Hinou, Shin-Ichiro Nishimura
    • Journal Title

      Bioorganic & Medicinal Chemistry 118

      Pages: 633-1640

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Microwave Effect for Glycosylation Promoted by Solid Super Acid in Supercritical Carbon Dioxide2009

    • Author(s)
      Hiroshi Hinou, Naohiro Saito, Masato Ogawa, Takahiko Maeda, Shin-Ichiro Nishimura
    • Journal Title

      International Journal of Molecular Science 10

      Pages: 5285-5295

    • NAID

      120001788346

    • Related Report
      2009 Final Research Report
  • [Journal Article] Functional Neoglycopeptides: Synthesis and Characterization of New Class MUC1 Glycoprotein Models Having Core 2-based O-Glycan and Complex-type N-Glycan Chains2009

    • Author(s)
      Takahiko Matsushita, Reiko Sadamoto, Naoki Oyabu, Hideki Nakata, Masataka Fumoto, Naoki Fujitani, Yasuhiro Takegawa, Takashi Sakamoto, Masaki Kurogochi, Hiroshi Hinou, Hiroki Shimizu, Takaomi Ito, Kentaro Naruchi, Hiroko Togame, HiroshiTakemoto, Hirosato Kondo, Shin-Ichiro Nishimura
    • Journal Title

      Biochemistry 48

      Pages: 11117-11133

    • Related Report
      2009 Final Research Report
  • [Journal Article] Mechanism-Based Probing, Characterization, and Inhibitor Design of Glycosidases and Glycosyltransferases2009

    • Author(s)
      Hiroshi Hinou, Shin-Ichiro Nishimura
    • Journal Title

      Curr. Top. Med. Chem. 9

      Pages: 106-116

    • Related Report
      2009 Final Research Report
  • [Journal Article] An Essential Epitope of Anti-MUC1 Monoclonal Antibody KL-6 Revealed by Focused Glycopeptide Library2009

    • Author(s)
      Naoki Ohyabu, Hiroshi Hinou, Takahiko Matsushita, Ryuko Izumi, Hiroki Shimizu, Keiko Kawamoto, Yoshito Numata, Hiroko Togame, Hiroshi Takemoto, Hirosato Kondo, Shin-Ichiro Nishimura
    • Journal Title

      Journal of the American Chemical Society 131

      Pages: 17102-17109

    • Related Report
      2009 Final Research Report
  • [Journal Article] An Efficient Strategy for the Explortion of Specific Inhibitors of Sialyltransferases2009

    • Author(s)
      Kensaku Hosoguchi, Takahiro Maeda, Jun-ichi Furukawa, Hiroshi Hinou, Shin-Ichiro Nishimura
    • Journal Title

      Proceeding of Molecular Imaging for Integrated Medical Therapy and Drug Development( Springer)

      Pages: 294-301

    • Related Report
      2009 Final Research Report
  • [Journal Article] One-pot synthesis of cyclic antifreeze glycopeptides2009

    • Author(s)
      Masakazu Hachisu, Hiroshi Hinou, Manabu Takamichi, Sakae Tsuda, Shuhei Koshida, Shin-Ichiro Nishimura
    • Journal Title

      Chem. Commun.

      Pages: 1641-1643

    • Related Report
      2009 Final Research Report
  • [Journal Article] Mechanism-Based Probing, Characterization, and Inhibitor Design of Glycosidases and Glycosyltransferases2009

    • Author(s)
      Hiroshi Hinou, Shin-Ichiro Nishimura
    • Journal Title

      Curr.Top.Med.Chem. 9

      Pages: 106-116

    • Related Report
      2009 Annual Research Report
  • [Journal Article] Mechanism-Based Probing, Characterization, and Inhibitor Design of Glycosidases and Glycosyltransferases2009

    • Author(s)
      比能洋、西村紳一郎
    • Journal Title

      Current topics in medicinal chemistry 9

      Pages: 106-116

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] One-pot synthesis of cyclic antifreeze glycopeptides2009

    • Author(s)
      八須匡和、比能洋、高道学、津田栄、越田周平、西村紳一郎
    • Journal Title

      Chemical Communications

      Pages: 1641-1643

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A new glycosylation method part 3: study of microwave effects at low temperatures to control reaction pathways and reduce byproducts2008

    • Author(s)
      Hiroki Shimizu, Yayoi Yoshimura, Hiroshi Hinou, Shin-Ichiro Nishimura
    • Journal Title

      Tetrahedron 64

      Pages: 10091-10096

    • Related Report
      2009 Final Research Report
  • [Journal Article] A new glycosylation method part 3 : study of microwave effects at low temperatures to control, reaction pathways and reduce byproducts2008

    • Author(s)
      清水弘樹、吉村弥生、比能洋、西村紳一郎
    • Journal Title

      Tetrahedron 64

      Pages: 10091-10096

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Highly efficient synthesis of versatile proteoglycan core structures from 1, 6-anhydro- β-lactose as a key starting material2007

    • Author(s)
      Ken Shimawaki, Yoshinori Fujisawa, Fumihiro Sato, Naoki Fujitani, Masaki Kurogochi, Hiroko Hoshi, Hiroshi Hinou, Shin-Ichiro Nishimura
    • Journal Title

      Angew. Chem. Int. Ed. 46

      Pages: 3074-3079

    • Related Report
      2009 Final Research Report
  • [Journal Article] One-pot solid phase glycoblotting and probing by trans-oximization for high-throughput glycomics and glycoproteomics2007

    • Author(s)
      Hideyuki Shimamoka, Hiromitsu Kuramoto, Jun-ichi Furukawa, Yoshiaki Miura, Masaki Kurogochi, Yoko Kita, Hiroshi Hinou, Yasuro Shinohara, Shin-Ichiro Nishimura
    • Journal Title

      Chemistry-A Europian Journal 13

      Pages: 1664-1673

    • Related Report
      2009 Final Research Report
  • [Journal Article] Structural analysis of O-glycopeptides employing negative- and positive-ion MSn spectra obtained by collision-induced and electron-capture dissociations in linear ion trap time-of-flight mass spectrometry2007

    • Author(s)
      Kisaburo Deguchi, Hiroki Ito, Takashi Baba, Atsushi Hirabayashi, Hiroaki Nakagawa, Masataka Fumoto, Hiroshi Hinou, Shin-Ichiro Nishimura
    • Journal Title

      Rapid Commun. Mass Spectrom. 21

      Pages: 691-698

    • Related Report
      2009 Final Research Report
  • [Journal Article] Mechanism-based Probing, Characterization, and Inhibitor Design of Glycosidases and Glycosyltransferases

    • Author(s)
      Hiroshi Hinou, Hirokazu Kai, Shin-Ichiro Nishimura
    • Journal Title

      Methods in Molecular Biology (in press)

    • Related Report
      2009 Final Research Report
  • [Presentation] Novel Strategy for Neuraminidase Inhibitors Using Mechanism-based probe2010

    • Author(s)
      Hiroshi Hinou, Risho Miyoshi, Yasuaki Takasu, Hirokazu Kai, Masaki Kurogochi, Xiao-Dong Gao, Shin-Ichiro Nishimura
    • Organizer
      American Chemical Society Spring 2010 National Meeting & Exposition
    • Place of Presentation
      San Francisco, U.S.A
    • Year and Date
      2010-03-24
    • Related Report
      2009 Annual Research Report
  • [Presentation] Novel Strategy for Neuraminidase Inhibitors Using Mechanism-based probe2010

    • Author(s)
      Hiroshi Hinou, Risho Miyoshi, Yasuaki Takasu, Hirokazu Kai, Masaki Kurogochi, Xiao-Dong Gao, Shin-Ichiro Nishimura
    • Organizer
      American Chemical Society Spring 2010 National Meeting & Exposition
    • Place of Presentation
      San Francisco (CA), USA
    • Related Report
      2009 Final Research Report
  • [Presentation] Development of Novel Sialidase Suicide Substrate2010

    • Author(s)
      甲斐宏一、比能洋、西村紳一郎
    • Organizer
      日本化学会・第90春季年会
    • Place of Presentation
      近畿大学・大阪
    • Related Report
      2009 Annual Research Report
  • [Presentation] 自殺基質型酵素プローブを用いたVibrio cholerae neuraminidase阻害剤の開発2009

    • Author(s)
      比能洋、三好利尚、高須康明、甲斐宏一、西村紳一郎
    • Organizer
      GFRGシンポジウム
    • Place of Presentation
      札幌(ポスター)
    • Year and Date
      2009-08-25
    • Related Report
      2009 Final Research Report
  • [Presentation] 新規自殺基質を用いた蛋白質のラベル化2009

    • Author(s)
      古川貴之、比能洋、馮飛、西村紳一郎
    • Organizer
      日本化学会第89春季年会
    • Place of Presentation
      日本大学理工学部(船橋)
    • Year and Date
      2009-03-29
    • Related Report
      2008 Annual Research Report
  • [Presentation] 新規骨格をベースとしたシアリダーゼ阻害剤の開発研究2009

    • Author(s)
      佐藤公法、比能洋、高須康明、黒河内政樹、西村紳一郎
    • Organizer
      日本化学会第89春季年会
    • Place of Presentation
      日本大学理工学部(船橋)
    • Year and Date
      2009-03-27
    • Related Report
      2008 Annual Research Report
  • [Presentation] ppGaINAcT阻害剤に関する研究2009

    • Author(s)
      阿部皓基, 比能洋, 古川潤一, 前田哲宏, 細口健作, 西村紳一郎
    • Organizer
      日本化学会第89春季年会
    • Place of Presentation
      日本大学理工学部(船橋)
    • Year and Date
      2009-03-27
    • Related Report
      2008 Annual Research Report
  • [Presentation] Design and Synthesis, and Evaluation of Sialidase Inhibitors Based on Enzymatic Dynamism2009

    • Author(s)
      Hirokazu Kai, Yasuaki Takasu, Rishou Miyoshi, Masaki Kurogochi, Hiroshi Hinou, Shin-Ichiro Nishimura
    • Organizer
      The 6th Symposium for Future Drug Discovery and Medical Care
    • Place of Presentation
      Sapporo(Poster)
    • Year and Date
      2009-03-13
    • Related Report
      2009 Final Research Report
  • [Presentation] Research on the development of novel structure-based sialidase inhibitors2009

    • Author(s)
      Kiminori Sato, Hiroshi Hinou, Shin-Ichiro Nishimura
    • Organizer
      The 6th Symposium for Future Drug Discovery and Medical Care
    • Place of Presentation
      Sapporo(Poster)
    • Year and Date
      2009-03-13
    • Related Report
      2009 Final Research Report
  • [Presentation] Novel inhibitor development for fucosyltransferases using simple donor analog as a scaffold2009

    • Author(s)
      Takahiro Maeda, Jun-ichi Furukawa, Kenji Takaya, Hiroshi Hinou, Shin-Ichiro Nishimura
    • Organizer
      The 6th Symposium for Future Drug Discovery and Medical Care
    • Place of Presentation
      Sapporo(Poster)
    • Year and Date
      2009-03-13
    • Related Report
      2009 Final Research Report
  • [Presentation] An efficient strategy for the exploration of specific inhibitors of sialyltransferases2009

    • Author(s)
      Kensaku Hosoguchi, Takahiro Maeda, Jun-ichi Furukawa, Hiroshi Hinou, Shin-ichiro Nishimura
    • Organizer
      The 6th Symposium for Future Drug Discovery and Medical Care
    • Place of Presentation
      Sapporo(Poster)
    • Year and Date
      2009-03-13
    • Related Report
      2009 Final Research Report
  • [Presentation] Mechanism-based fluorescent labeling of BSA using suicide substrate2009

    • Author(s)
      Takayuki Hurukawa, Hiroshi Hinou, Fei Feng, Shin-Ichiro Nishimura
    • Organizer
      The 6th Symposium for Future Drug Discovery and Medical Care
    • Place of Presentation
      Sapporo(Poster)
    • Year and Date
      2009-03-13
    • Related Report
      2009 Final Research Report
  • [Presentation] Design and Synthesis, and Evaluation of Sialidase Inhibitors Based on Enzymatic Dynamism2009

    • Author(s)
      甲斐宏一, 高須康明, 三好利尚, 黒河内政樹, 比能洋, 西村紳一郎
    • Organizer
      The 6^<th> Symposium for Future Drug Discovery and Medical Care
    • Place of Presentation
      北海道大学(札幌)
    • Year and Date
      2009-03-13
    • Related Report
      2008 Annual Research Report
  • [Presentation] Research on the development of novel structure-based sialidase inhibitors2009

    • Author(s)
      佐藤公法、比能洋、西村紳一郎
    • Organizer
      The 6^<th> Symposium for Future Drug Discovery and Medical Care
    • Place of Presentation
      北海道大学(札幌)
    • Year and Date
      2009-03-13
    • Related Report
      2008 Annual Research Report
  • [Presentation] Mechanism-based fluorescent labeling of BSA using suicide substrate2009

    • Author(s)
      古川貴之、比能洋、馮飛、西村紳一郎
    • Organizer
      The 6^<th> for Future Drug Discovery and Medical Care
    • Place of Presentation
      北海道大学(札幌)
    • Year and Date
      2009-03-13
    • Related Report
      2008 Annual Research Report
  • [Presentation] ppGalNAcT阻害剤に関する研究2009

    • Author(s)
      阿部皓基, 比能洋, 古川潤一, 前田哲宏, 細口健作, 西村紳一郎
    • Organizer
      日本化学会第89春季年会
    • Place of Presentation
      船橋
    • Related Report
      2009 Final Research Report
  • [Presentation] 新規自殺基質を用いた蛋白質のラベル化2009

    • Author(s)
      古川貴之、比能洋、馮飛、西村紳一郎
    • Organizer
      日本化学会第89春季年会
    • Place of Presentation
      船橋(ポスター)
    • Related Report
      2009 Final Research Report
  • [Presentation] 新規骨格をベースとしたシアリダーゼ阻害剤の開発研究2009

    • Author(s)
      佐藤公法、比能洋、高須康明、黒河内政樹、西村紳一郎
    • Organizer
      日本化学会第89春季年会
    • Place of Presentation
      船橋(ポスター)
    • Related Report
      2009 Final Research Report
  • [Presentation] シアリダーゼ自殺基質におけるアグリコンフォーカスドライブラリーの作成と評価2008

    • Author(s)
      甲斐宏一、比能洋、西村紳一郎
    • Organizer
      第42回高分子学会北海道支部研究発表会
    • Place of Presentation
      札幌(ポスター)
    • Year and Date
      2008-01-29
    • Related Report
      2009 Final Research Report
  • [Presentation] フォーカスドライブラリーを用いた特異的シアル酸転移酵素阻害剤の探索2008

    • Author(s)
      細口健作、古川潤一、前田哲宏、比能洋、西村紳一郎
    • Organizer
      第42回高分子学会北海道支部研究発表会
    • Place of Presentation
      札幌
    • Year and Date
      2008-01-29
    • Related Report
      2009 Final Research Report
  • [Presentation] 酵素の動的構造に着目したシアリダーゼ阻害剤の開発研究2008

    • Author(s)
      高須康明、黒河内政樹、比能洋、西村紳一郎
    • Organizer
      高分子学会第42回北海道支部研究発表会
    • Place of Presentation
      札幌
    • Year and Date
      2008-01-29
    • Related Report
      2007 Annual Research Report
  • [Presentation] シアリダーゼ自殺基質におけるアグリコンフォーカストライブラリーの作製と評価2008

    • Author(s)
      甲斐宏一、比能洋、西村紳一郎
    • Organizer
      高分子学会第42回北海道支部研究発表会
    • Place of Presentation
      札幌
    • Year and Date
      2008-01-29
    • Related Report
      2007 Annual Research Report
  • [Presentation] Mechanism-based Strutegy Toward Novel Inhibitor of Sialidases2008

    • Author(s)
      Hiroshi Hinou, Yasuaki Takasu, Kiminori Sato, Hirokazu Kai, Masaki Kurogochi, Nobuaki Miura, Taku Nakahara, Xiao-Dong Gao, Shin-Icho Nishimura
    • Organizer
      XXIV International Carbohydrate Symposium
    • Place of Presentation
      Oslo, Norway(Poster)
    • Related Report
      2009 Final Research Report
  • [Presentation] Design and synthesis and evaluation of sialidase inhibitors based on enzymatic dynamism2007

    • Author(s)
      Yasuaki Takasu, Masaki Kurogochi, Hiroshi Hinou, Shin-Ichiro Nishimura
    • Organizer
      Annual Meeting of the Society for Glycobiology
    • Place of Presentation
      Boston (USA)
    • Year and Date
      2007-11-13
    • Related Report
      2007 Annual Research Report
  • [Presentation] Design and synthesis and evaluation of sialidase inhibitors based on enzymatic dynamism2007

    • Author(s)
      Yasuaki Takasu, Masaki Kurogochi, Hiroshi Hinou, Shin-Ichiro Nishimura
    • Organizer
      Annual Meeting of the Society for Glycobiology
    • Place of Presentation
      Boston, USA(Poster)
    • Related Report
      2009 Final Research Report
  • [Presentation] An Efficient Strategy for the Exploration of Specific Inhibitors of Sialyltransferases2007

    • Author(s)
      Kensaku Hosoguchi, Junichi Furukawa, Hirohsi Hinou, Shin-Ichiro Nishimura
    • Organizer
      Annual Meeting of the Society for Glycobiology
    • Place of Presentation
      Boston, USA(Poster)
    • Related Report
      2009 Final Research Report
  • [Remarks]

    • URL

      http://www.lfsci.hokudai.ac.jp/search/jouhou/hino.html

    • Related Report
      2009 Final Research Report
  • [Patent(Industrial Property Rights)] シアリダーゼ阻害剤2007

    • Inventor(s)
      西村紳一郎、比能洋
    • Industrial Property Rights Holder
      北海道大学
    • Filing Date
      2007-05-12
    • Related Report
      2009 Final Research Report
  • [Patent(Industrial Property Rights)] シアリダーゼ阻害剤2007

    • Inventor(s)
      西村紳一郎、比能洋
    • Industrial Property Rights Holder
      北海道大学
    • Filing Date
      2007-06-15
    • Related Report
      2009 Final Research Report
  • [Patent(Industrial Property Rights)] シアリダーゼ阻害剤2007

    • Inventor(s)
      比能 洋、西村紳一郎
    • Industrial Property Rights Holder
      北海道大学
    • Industrial Property Number
      2007-133705
    • Filing Date
      2007-05-21
    • Related Report
      2007 Annual Research Report
  • [Patent(Industrial Property Rights)] シアリダーゼ阻害剤2007

    • Inventor(s)
      比能 洋、西村紳一郎
    • Industrial Property Rights Holder
      北海道大学
    • Industrial Property Number
      2007-158635
    • Filing Date
      2007-06-15
    • Related Report
      2007 Annual Research Report

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Published: 2007-04-01   Modified: 2016-04-21  

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