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Development of Expression System for Photoreceptor Using Cell-free Protein Synthesis and Application of Its system for Their Functional Analysis

Research Project

Project/Area Number 19770136
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Biophysics
Research InstitutionMatsuyama University (2008-2010)
The Institute of Physical and Chemical Research (2007)

Principal Investigator

SHIMONO Kazumi  Matsuyama University, 薬学部, 助教 (30415187)

Project Period (FY) 2007 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥3,990,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥690,000)
Fiscal Year 2010: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2009: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2008: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2007: ¥1,000,000 (Direct Cost: ¥1,000,000)
Keywords膜タンパク質 / 大量発現 / ステロイド系界面活性剤 / 脂質二重膜 / フォトサイクル / ロドプシン / 光受容膜タンパク質 / 無細胞タンパク質合成 / リポソーム / キサントロドプシン / 界面活性剤 / 光誘起プロトン移動 / リボソーム / バクテリオロドプシン / フォールディング / 部位特異的ラベル / 非天然アミノ酸導入
Research Abstract

In general, a functional cell-free protein synthesis for membrane proteins at high yield is difficult. In the present study, we developed the novel cell-free protein synthesis technology that was performed the steroid derived detergent removal, the lipid bilayer formation, and the protein synthesis by the dialysis method at the same time. We obtained the functional Bacteriorhodopsin in a large amount (0.5mg/mL reaction solution), and this yield was 5-25 times higher than previously described preparations. In addition, it succeeded a functional overexpression of the rhodopsin from marine algae and eubacteria that could not be obtained in large amount using the living cell expression system.

Report

(6 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report   Self-evaluation Report ( PDF )
  • 2008 Annual Research Report
  • 2007 Annual Research Report
  • Research Products

    (36 results)

All 2011 2010 2009 2008 2007

All Journal Article (13 results) (of which Peer Reviewed: 8 results) Presentation (20 results) Patent(Industrial Property Rights) (3 results)

  • [Journal Article] 無細胞タンパク質合成による膜タンパク質の生産2011

    • Author(s)
      下野和実, 白水美香子, 横山茂之
    • Journal Title

      生物物理 51(3)

      Pages: 128-129

    • NAID

      10029139965

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Photochemistry of a Putative New Class of Sensory Rhodopsin (SRIII) coded by xop2 of Haloarcular marismortu2011

    • Author(s)
      Nakao, Y., Kikukawa,T., Shimono, K., Tamogami, J., Kimitsuki, N., Nara, T., Unno, M., Ihara, K., Kamo, N.
    • Journal Title

      Journal of Photochemistry and Photobiology B 102

      Pages: 45-54

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Photochemistry of a Putative New Class of Sensory Rhodopsin (SRIII) coded by xop2 of Haloarcular marismortui2011

    • Author(s)
      Nakao, Y., Kikukawa, T., Shimono, K., 他6名
    • Journal Title

      Journal of Photochemistry and Photobiology B

      Volume: 102 Pages: 45-54

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 無細胞タンパク質合成系を活用した膜タンパク質合成方法2010

    • Author(s)
      下野和実, 白水美香子, 横山茂之
    • Journal Title

      実験医学 28(11)

      Pages: 1775-1780

    • Related Report
      2010 Final Research Report
  • [Journal Article] 無細胞タンパク質合成系を活用した膜タンパク質合成法の開発2010

    • Author(s)
      下野和実, 白水美香子, 横山茂之
    • Journal Title

      BIOINDUSTRY 27

      Pages: 55-63

    • Related Report
      2010 Final Research Report
  • [Journal Article] 無細胞タンパク質合成系を活用した膜タンパク質合成方法2010

    • Author(s)
      下野和実, 白水美香子, 横山茂之
    • Journal Title

      実験医学

      Volume: 28(11) Pages: 1775-1780

    • Related Report
      2010 Annual Research Report
  • [Journal Article] 無細胞タンパク質合成系を活用した膜タンパク質合成法の開発2010

    • Author(s)
      下野和実, 白水美香子, 横山茂之
    • Journal Title

      BIO INDUSTRY

      Volume: 27(6) Pages: 55-63

    • Related Report
      2010 Annual Research Report
  • [Journal Article] Production of functional bacteriorhodopsin by an Escherichia coli cell-free protein synthesis system supplemented with steroid detergent and lipid2009

    • Author(s)
      Shimono, K., Goto, M., Kikukawa, T., Miyauchi, S., Shirouzu, M., Kamo, N., Yokoyama S.
    • Journal Title

      Protein Science 18

      Pages: 2160-2171

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Production of functional bacteriorhodopsin by an Escherichia coli cell-free protein synthesis system supplemented with steroid detergent and lipid2009

    • Author(s)
      Kazumi Shimono, Mie Goto, Takashi Kikukawa, Seiji Miyauchi, Mikako Shirouzu, Naoki Kamo, Shigeyuki Yokoyama
    • Journal Title

      Protein Science 18

      Pages: 2160-2171

    • Related Report
      2009 Self-evaluation Report
    • Peer Reviewed
  • [Journal Article] Production of functional bacteriorhodopsin by an Escherichia coli cell-free protein synthesis system supplemented with steroid detergent and lipid2009

    • Author(s)
      Kazumi Shimono, 他6名
    • Journal Title

      Protein Science 18

      Pages: 2160-2171

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Functional overexpression of SMR-type multidrug transporter using cell-free protein synthesis system and analysis of interaction between transporter and its substrates by isothermal titration calorimetry2008

    • Author(s)
      Shimono, K., Kikukawa, T., Nara, T., Someya, T., Shirouzu, M., Yokoyama, S., Miyauchi, S.
    • Journal Title

      Yakugaku Zasshi Journal of The Pharmaceutical Society of Japan, (Suppl.2) 128

      Pages: 139-140

    • Related Report
      2010 Final Research Report
  • [Journal Article] A long-lived M-like state of phoborhodopsin that mimics the active state2008

    • Author(s)
      Sudo, Y., Nishihori, T., Iwamoto, M., Shimono, K., Kojima, C., Kamo, N.
    • Journal Title

      Biophysical Journal 95(2)

      Pages: 753-760

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Participation of the surface structure of Pharaonis phoborhodopsin, ppR and its A149S and A149V mutants, consisting of the C-terminal alpha-helix and E-F loop, in the complex-formation with the cognate transducer pHtrII, as revealed by site-directed C-13 solid-state NMR2007

    • Author(s)
      Kawamura, I., Ikeda, Y., Sudo, Y., Iwamoto, M., Shimono, K., Yamaguchi, S., Tuzi, S., Saito, H., Kamo, N., Naito, A.
    • Journal Title

      Photochemistry and Photobiology 83(2)

      Pages: 339-345

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Presentation] Thermodynamic characterization of interaction between small multidrug resistance transporter (EmrE) and its substrate at various pHs2010

    • Author(s)
      Kazumi Shimono
    • Organizer
      Pharmaceutical Sciences World Congress 2010
    • Place of Presentation
      New Orleans, LA, USA
    • Year and Date
      2010-11-16
    • Related Report
      2010 Final Research Report
  • [Presentation] Thermodynamic characterization of interacrion between small multidrug resistance transporter (EmrE) and its substrate at various pHs2010

    • Author(s)
      Shimono, K., Someya, T., Shirouzu, M., Yokoyama, S., Miyauchi, S.
    • Organizer
      Pharmaceutical Sciences World Congress 2010
    • Place of Presentation
      New Orleans, LA, USA
    • Year and Date
      2010-11-16
    • Related Report
      2010 Annual Research Report
  • [Presentation] Thermodynamic study of pH dependence on interaction between small multidrug resistance transporter (EmrE) and its substrate2010

    • Author(s)
      Kazumi Shimono
    • Organizer
      日本生物物理学会第48回年会
    • Place of Presentation
      仙台
    • Year and Date
      2010-09-20
    • Related Report
      2010 Final Research Report
  • [Presentation] Thermodynamic study of pH dependence on interaction between small multidrug resistance transporter (EmrE) and its substrate2010

    • Author(s)
      Shimono, K., Someya, T., Shirouzu, M., Yokoyama, S., Miyauchi, S.
    • Organizer
      第48回日本生物物理学会年会
    • Place of Presentation
      仙台
    • Year and Date
      2010-09-20
    • Related Report
      2010 Annual Research Report
  • [Presentation] 等温滴定型熱量計による多剤トランスポーターEmrEと基質との相互作用解析2010

    • Author(s)
      下野和実
    • Organizer
      第4回トランスポーター研究会九州部会
    • Place of Presentation
      長崎
    • Year and Date
      2010-09-11
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] 多剤輸送担体EmrEと基質とのpH依存的相互作用変化の熱力学的特性2010

    • Author(s)
      下野和実
    • Organizer
      日本生物物理中国四国支部例
    • Place of Presentation
      松山
    • Year and Date
      2010-05-08
    • Related Report
      2010 Final Research Report
  • [Presentation] 多剤輸送担体EmrEと基質とのpH依存的相互作用変化の熱力学的特性2010

    • Author(s)
      下野和実, 染谷友美, 白水美香子, 横山茂之, 宮内正二
    • Organizer
      日本生物物理中国四国支部例会
    • Place of Presentation
      松山
    • Year and Date
      2010-05-08
    • Related Report
      2010 Annual Research Report
  • [Presentation] 等温滴定型熱量計による多剤輸送担体EmrEと基質との相互作用解析2010

    • Author(s)
      下野和実
    • Organizer
      日本薬学会第130年会
    • Place of Presentation
      岡山
    • Year and Date
      2010-03-29
    • Related Report
      2010 Final Research Report 2009 Annual Research Report 2009 Self-evaluation Report
  • [Presentation] SMR型多剤排出輸送担体と基質の相互作用に伴う熱量変化2009

    • Author(s)
      下野和実
    • Organizer
      日本生物物理学会第47回年会
    • Place of Presentation
      徳島
    • Year and Date
      2009-10-31
    • Related Report
      2010 Final Research Report
  • [Presentation] SMR型多剤輸送担体と基質の相互作用に伴う熱量変化2009

    • Author(s)
      下野和実
    • Organizer
      日本生物物理学会第47回年会
    • Place of Presentation
      徳島
    • Year and Date
      2009-10-31
    • Related Report
      2009 Self-evaluation Report
  • [Presentation] SMR型多剤排出輸送担体と基質の相互作用に伴う熱量変化2009

    • Author(s)
      下野和実, 他4名
    • Organizer
      第47回日本生物物理学会年会
    • Place of Presentation
      徳島
    • Year and Date
      2009-10-31
    • Related Report
      2009 Annual Research Report
  • [Presentation] SMR型多剤排出タンパク質の無細胞大量機能発現および等温滴定型熱量計による基質との相互作用解析2009

    • Author(s)
      下野和実
    • Place of Presentation
      札幌
    • Year and Date
      2009-08-07
    • Related Report
      2009 Self-evaluation Report
  • [Presentation] Na+共役型モノカルボン酸輸送担体(SMCT)に対する柑橘類抽出成分の効果2009

    • Author(s)
      下野和実
    • Organizer
      第4回トランスポーター研究会
    • Place of Presentation
      東京
    • Year and Date
      2009-05-28
    • Related Report
      2010 Final Research Report
  • [Presentation] Na^+共役型モノカルボン酸輸送担体(SMCT)に対する柑橘類抽出成分の効果2009

    • Author(s)
      下野和実, 他3名
    • Organizer
      第4回トランスポーター研究会
    • Place of Presentation
      東京
    • Year and Date
      2009-05-23
    • Related Report
      2009 Annual Research Report
  • [Presentation] Functional Overexpression of Membrane Proteins Using Cell-free Protein Synthesis System Supplemented with Steroid Detergent and Lipid2008

    • Author(s)
      Kazumi Shimono
    • Organizer
      Protein Island Matsuyama (PIM) International Symposium 2008
    • Place of Presentation
      Matsuyama, Japan
    • Year and Date
      2008-09-26
    • Related Report
      2010 Final Research Report
  • [Presentation] Functional Overexpression of Membrane Proteins Using Cell-free Protein Synthesis System Supplemented with Steroid Detergent and Lipid2008

    • Author(s)
      Kazumi Shimono
    • Organizer
      Protein Island Matsuyama (PIM) International Symposium 2008
    • Place of Presentation
      Matsuyama
    • Year and Date
      2008-09-26
    • Related Report
      2009 Self-evaluation Report
  • [Presentation] Functional Overexpression of Membrane Proteins Using Cell-free Protein Synthesis System Supplemented with Steroid Detergent and Lipid2008

    • Author(s)
      Kazumi Shimono, 他4名
    • Organizer
      Protein Island Matsuyama (PIM) International Symposium 2008
    • Place of Presentation
      松山
    • Year and Date
      2008-09-26
    • Related Report
      2008 Annual Research Report
  • [Presentation] SMR型多剤排出タンパク質の無細胞大量機能発現および等温滴定型熱量計による基質との相互作用解析2008

    • Author(s)
      下野和実
    • Organizer
      第30回生体膜と薬物の相互作用シンポジウム
    • Place of Presentation
      東京
    • Year and Date
      2008-08-07
    • Related Report
      2010 Final Research Report
  • [Presentation] SMR型多剤排出タンパク質の無細胞大量機能発現および等温滴定型熱量計による基質との相互作用解析2008

    • Author(s)
      下野和実, 他6名
    • Organizer
      第30回生体膜と薬物の相互作用シンポジウム
    • Place of Presentation
      札幌
    • Year and Date
      2008-08-07
    • Related Report
      2008 Annual Research Report
  • [Presentation] 無細胞タンパク質合成系を利用した新規膜タンパク質機能発現系の開発2007

    • Author(s)
      下野和実
    • Organizer
      日本生物物理学会第45回年会
    • Place of Presentation
      横浜
    • Year and Date
      2007-12-21
    • Related Report
      2010 Final Research Report 2009 Self-evaluation Report 2007 Annual Research Report
  • [Patent(Industrial Property Rights)] METHOD FOR PRODUCING MEMBRANE PROTEIN2009

    • Inventor(s)
      Shigeyuki Yokoyama, Kazumi Shimono, Mikako Shirouzu, Mie Goto
    • Industrial Property Rights Holder
      RIKEN
    • Filing Date
      2009-05-14
    • Related Report
      2010 Final Research Report
  • [Patent(Industrial Property Rights)] 2型ヒスタミン受容体タンパク質に結合し,かつ2型ヒスタミン受容体とヒスタミンとの結合を阻止し得るモノクローナル抗体2008

    • Inventor(s)
      渡邊武,横山茂之,白水美香子,寺田貴帆,下野和実
    • Industrial Property Rights Holder
      独立行政法人理化学研究所
    • Filing Date
      2008-07-24
    • Related Report
      2010 Final Research Report
  • [Patent(Industrial Property Rights)] 膜タンパク質の製造方法2007

    • Inventor(s)
      下野和実, 他3名
    • Industrial Property Rights Holder
      理化学研究所
    • Industrial Property Number
      2007-286899
    • Filing Date
      2007-11-05
    • Related Report
      2007 Annual Research Report

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Published: 2007-04-01   Modified: 2016-04-21  

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