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Biomedical Applications of High-troughput Raman Flow Cytometry

Research Project

Project/Area Number 19F19805
Research Category

Grant-in-Aid for JSPS Fellows

Allocation TypeSingle-year Grants
Section外国
Review Section Basic Section 32010:Fundamental physical chemistry-related
Research InstitutionThe University of Tokyo

Principal Investigator

合田 圭介  東京大学, 大学院理学系研究科(理学部), 教授 (70518696)

Co-Investigator(Kenkyū-buntansha) GALA DE PABLO JULIA  東京大学, 理学(系)研究科(研究院), 外国人特別研究員
Project Period (FY) 2019-11-08 – 2022-03-31
Project Status Completed (Fiscal Year 2021)
Budget Amount *help
¥2,200,000 (Direct Cost: ¥2,200,000)
Fiscal Year 2021: ¥500,000 (Direct Cost: ¥500,000)
Fiscal Year 2020: ¥600,000 (Direct Cost: ¥600,000)
Fiscal Year 2019: ¥1,100,000 (Direct Cost: ¥1,100,000)
KeywordsFT-CARS / Raman / Microalgae / Carbohydrate / Paramylon / Euglena / Starch / Carotenoid / Raman Microalgae / Euglena Starch / Carbohydrate Paramylon
Outline of Research at the Start

1) System training with standard samples and human leukaemia cell line cells.
2) Optimization of the microfluidic design and fabrication.
3) Multivariate analysis optimization and classification models development, integrating bright field imaging information.
4) Tests on healthy human blood and on leukaemia samples. Analysis of SS patient samples cell heterogeneity. In-vitro drug treatment response analysis.
5) Tests with CTC samples.

Outline of Annual Research Achievements

The system pulse-shaping capabilities were improved and a transform-limited pulse was achieved, improving the sensitivity and signal quality for carbohydrates and carotenoids. Heavy ions mutagenesis was performed in Euglena gracilis, identifying hyperaccumulating mutants via FT-CARS paramylon. RNA isolation was done and cDNA analysis was performed. Analysis of this data and manuscript preparation is currently in process. The analysis of starch accumulation in Chromochloris zofingiensis via both FT-CARS and enzymatic analysis were done, and a manuscript is in preparation. Sorting of multiple microalgae species was achieved and findings were recently published in Advanced Materials Technology. Human blood signal was obtained via FT-CARS, likely due to the strong resonant Raman of haemoglobin. However, leukocyte detection is still challenging with the current system sensitivity, and thus the system will require further optimization for clinical applications. An additional application of the FT-CARS system was identified: microplastics detection under flow. Preliminary work was done and has been followed by other researchers after the fellow’s departure.

Research Progress Status

令和3年度が最終年度であるため、記入しない。

Strategy for Future Research Activity

令和3年度が最終年度であるため、記入しない。

Report

(3 results)
  • 2021 Annual Research Report
  • 2020 Annual Research Report
  • 2019 Annual Research Report
  • Research Products

    (10 results)

All 2022 2021 2020 Other

All Journal Article (5 results) (of which Int'l Joint Research: 5 results,  Peer Reviewed: 5 results,  Open Access: 5 results) Presentation (4 results) (of which Int'l Joint Research: 4 results) Remarks (1 results)

  • [Journal Article] High‐Throughput Raman‐Activated Cell Sorting in the Fingerprint Region2022

    • Author(s)
      Lindley Matthew、Gala de Pablo Julia、Peterson Walker、Isozaki Akihiro、Hiramatsu Kotaro、Goda Keisuke
    • Journal Title

      Advanced Materials Technologies

      Volume: 2101567 Issue: 10 Pages: 2101567-2101567

    • DOI

      10.1002/admt.202101567

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Ultrafast impulsive Raman spectroscopy across the terahertz?fingerprint region2022

    • Author(s)
      Peterson Walker、de Pablo Julia Gala、Lindley Matthew、Hiramatsu Kotaro、Goda Keisuke
    • Journal Title

      Advanced Photonics

      Volume: 4 Issue: 01

    • DOI

      10.1117/1.ap.4.1.016003

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] High-Throughput Raman Flow Cytometry and Beyond2021

    • Author(s)
      Gala de Pablo Julia、Lindley Matthew、Hiramatsu Kotaro、Goda Keisuke
    • Journal Title

      Accounts of Chemical Research

      Volume: 54 Issue: 9 Pages: 2132-2143

    • DOI

      10.1021/acs.accounts.1c00001

    • Related Report
      2021 Annual Research Report 2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Responses to 10 common criticisms of anti-racism action in STEMM2021

    • Author(s)
      Gosztyla Maya L.、Kwong Lydia、Gala de Pablo Julia, et al.
    • Journal Title

      PLOS Computational Biology

      Volume: 17 Issue: 7 Pages: e1009141-e1009141

    • DOI

      10.1371/journal.pcbi.1009141

    • Related Report
      2021 Annual Research Report 2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Highly sensitive Fourier-transform coherent anti-Stokes Raman scattering spectroscopy via genetic algorithm pulse shaping2021

    • Author(s)
      Lindley Matthew、Gala de Pablo Julia、Kinegawa Ryo、Hiramatsu Kotaro、Goda Keisuke
    • Journal Title

      Optics Letters

      Volume: 46 Issue: 17 Pages: 4320-4320

    • DOI

      10.1364/ol.434054

    • Related Report
      2021 Annual Research Report 2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] From coherent quantum photonics to vibrational flow cytometry2021

    • Author(s)
      Gala de Pablo, J
    • Organizer
      Quantum Life Science 2021 (Online)
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] High-throughput Raman flow cytometry for directed evolution.2021

    • Author(s)
      Gala de Pablo, J
    • Organizer
      Oral presentation at SciX 2021 (Providence, Rhode Island, USA)
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Vibrational flow cytometry on a chip: a label-free tool for metabolic phenotyping.2020

    • Author(s)
      Gala de Pablo, J., Lindley, M., Hiramatsu, K., Isozaki A., Goda K.
    • Organizer
      microTAS2020 (Online)
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Vibrational flow cytometry on a chip: a label-free tool for single-cell metabolic phenotyping2020

    • Author(s)
      Gala de Pablo, J., Lindley, M., Hiramatsu, K., Isozaki, A., Goda, K.
    • Organizer
      Serendipity Symposium 2020
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research
  • [Remarks] High-Throughput Raman Flow Cytometry and Beyond

    • URL

      https://jgaladepablo.github.io/publications.html

    • Related Report
      2021 Annual Research Report

URL: 

Published: 2019-11-29   Modified: 2024-03-26  

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