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Development of model systems for peptide-derived biologically relevant reactive species with the aim of elucidating the mechanism of redox regulation

Research Project

Project/Area Number 19H02698
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Review Section Basic Section 33010:Structural organic chemistry and physical organic chemistry-related
Research InstitutionTokyo Institute of Technology

Principal Investigator

Goto Kei  東京工業大学, 理学院, 教授 (70262144)

Project Period (FY) 2019-04-01 – 2022-03-31
Project Status Completed (Fiscal Year 2022)
Budget Amount *help
¥17,290,000 (Direct Cost: ¥13,300,000、Indirect Cost: ¥3,990,000)
Fiscal Year 2021: ¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2020: ¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2019: ¥10,010,000 (Direct Cost: ¥7,700,000、Indirect Cost: ¥2,310,000)
Keywords有機化学 / 酵素モデル / 活性中間体 / セレンタンパク質 / ペプチド / セレネン酸 / Se-ニトロソセレノシステイン / グルタチオンペルオキシダーゼ / 生体モデル / レドックス制御 / 合成化学
Outline of Research at the Start

生体内のレドックス制御において重要な役割を果たしているセレノシステイン由来活性中間体は、極めて不安定であるためモデル研究すら困難であった。本研究では、反応中間体の高活性と安定性を両立できる新規なペプチドモデル系の創製を目指し、巨大分子キャビティをペプチドのCradleとして活用することで、ペプチド由来活性中間体そのものを安定化できるCradled peptideモデルの開発を行う。これを用いて活性中間体の「標準物質」を合成し、その構造および反応性を直接的に解明する。それにより、これまで仮説にとどまっていた生体反応の想定機構を化学的に検証するとともに、より化学的根拠に基づく機構の提案を行う。

Outline of Final Research Achievements

In the biological functions of selenoproteins, various highly reactive species formed by oxidative modification of selenocysteine residues have been postulated to play crucial roles. However, many of the selenocysteine-derived reactive intermediates are so unstable that even their model studies have been difficult. In this study, we have developed cradled peptide models that can stabilize the selenopeptide-derived reactive intermediates by utilizing a macromolecular cavity as a protective cradle. Using this model system, we have succeeded in stabilization of the intermediates of glutathione peroxidase (GPx), one of the most important antioxidant enzymes, and experimentally demonstrated all the chemical processes proposed for the catalytic cycle of GPx, including the bypass process. The first synthesis of a Se-nitrososelenocysteine, an intermediate of the interaction between selenoproteins and reactive nitrogen species, has also been achieved.

Academic Significance and Societal Importance of the Research Achievements

セレンタンパク質の反応は、細胞の増殖、分化、アポトーシスなどに深く関わっている。特に、重要な抗酸化酵素であるグルタチオンペルオキシダーゼは、活性酸素種からの生体防御において中心的な役割を果たしているが、その反応機構は中間体の不安定性のために仮説の提唱にとどまっていた。また、セレンタンパク質と活性窒素種との相互作用中間体については、化学種の存在自体に実験的根拠がなかった。本研究により提唱反応過程がモデル系で実証されたことから、セレンタンパク質の作用機序に関して化学的エビデンスに基づいた研究が可能になり、老化や細胞死などの機構研究の基盤となるとともに、薬剤の合理的設計にも資するものと期待される。

Report

(4 results)
  • 2022 Final Research Report ( PDF )
  • 2021 Annual Research Report
  • 2020 Annual Research Report
  • 2019 Annual Research Report
  • Research Products

    (43 results)

All 2023 2022 2021 2020 2019 Other

All Int'l Joint Research (4 results) Journal Article (12 results) (of which Int'l Joint Research: 3 results,  Peer Reviewed: 10 results,  Open Access: 5 results) Presentation (27 results) (of which Int'l Joint Research: 6 results,  Invited: 5 results)

  • [Int'l Joint Research] Universita degli Studi di Padova(イタリア)

    • Related Report
      2021 Annual Research Report
  • [Int'l Joint Research] Universita degli Studi di Padova(イタリア)

    • Related Report
      2020 Annual Research Report
  • [Int'l Joint Research] State University of New York(米国)

    • Related Report
      2019 Annual Research Report
  • [Int'l Joint Research] University of Saskatchewan(カナダ)

    • Related Report
      2019 Annual Research Report
  • [Journal Article] Efficient oxyselenation and aminoselenation utilizing a selenenyl iodide based on the characteristic thermodynamics of its reaction with olefins2023

    • Author(s)
      Satoru Kuwano, Erika Takahashi, Jun Kikushima, Shohei Sase, Kei Goto
    • Journal Title

      New Journal of Chemistry

      Volume: 47 Issue: 20 Pages: 9569-9574

    • DOI

      10.1039/d2nj06346h

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Stable cysteine sulfenic acid: synthesis by direct oxidation of a thiol, crystallographic analysis, and elucidation of reactivities2023

    • Author(s)
      Goto Kei、Sano Tsukasa、Masuda Ryosuke、Otaka Shotaro、Kimura Ryutaro、Sase Shohei、Kuwano Satoru
    • Journal Title

      Phosphorus, Sulfur, and Silicon and the Related Elements

      Volume: - Issue: 6 Pages: 466-470

    • DOI

      10.1080/10426507.2023.2195650

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Oxy- and aminoselenation of alkenes utilizing an isolable selenenyl iodide2022

    • Author(s)
      Kuwano Satoru、Takahashi Erika、Ebisawa Kazuaki、Ishikawa Yo、Sase Shohei、Goto Kei
    • Journal Title

      Mendeleev Communications

      Volume: 32 Issue: 1 Pages: 80-82

    • DOI

      10.1016/j.mencom.2022.01.026

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Modeling of selenocysteine-derived reactive intermediates utilizing a nano-sized molecular cavity as a protective cradle2022

    • Author(s)
      Masuda Ryosuke、Goto Kei
    • Journal Title

      Methods in Enzymology

      Volume: 662 Pages: 331-361

    • DOI

      10.1016/bs.mie.2021.10.018

    • ISBN
      9780323907354
    • Related Report
      2021 Annual Research Report
  • [Journal Article] Model Study on the Catalytic Cycle of Glutathione Peroxidase Utilizing Selenocysteine-Containing Tripeptides: Elucidation of the Protective Bypass Mechanism Involving Selenocysteine Selenenic Acids2022

    • Author(s)
      Masuda Ryosuke、Kuwano Satoru、Sase Shohei、Bortoli Marco、Madabeni Andrea、Orian Laura、Goto Kei
    • Journal Title

      Bulletin of the Chemical Society of Japan

      Volume: 95 Issue: 9 Pages: 1360-1379

    • DOI

      10.1246/bcsj.20220156

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] システインスルフェン酸を捕まえる -化学プローブを用いた高反応性化学種の検出2022

    • Author(s)
      鍬野哲、後藤敬
    • Journal Title

      化学

      Volume: 77 Pages: 70-71

    • Related Report
      2021 Annual Research Report
  • [Journal Article] Late-Stage Functionalization of the Periphery of Oligophenylene Dendrimers with Various Arene Units via Fourfold C?H Borylation2021

    • Author(s)
      Masuda Ryosuke、Kuwano Satoru、Goto Kei
    • Journal Title

      The Journal of Organic Chemistry

      Volume: 86 Issue: 21 Pages: 14433-14443

    • DOI

      10.1021/acs.joc.1c01252

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Initial Step of Selenite Reduction via Thioredoxin for Bacterial Selenoprotein Biosynthesis2021

    • Author(s)
      Shimizu Atsuki、Tobe Ryuta、Aono Riku、Inoue Masao、Hagita Satoru、Kiriyama Kaito、Toyotake Yosuke、Ogawa Takuya、Kurihara Tatsuo、Goto Kei、Prakash N. Tejo、Mihara Hisaaki
    • Journal Title

      International Journal of Molecular Sciences

      Volume: 22 Issue: 20 Pages: 10965-10965

    • DOI

      10.3390/ijms222010965

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Isolable small-molecule cysteine sulfenic acid2021

    • Author(s)
      Sano Tsukasa、Masuda Ryosuke、Sase Shohei、Goto Kei
    • Journal Title

      Chemical Communications

      Volume: 57 Issue: 20 Pages: 2479-2482

    • DOI

      10.1039/d0cc08422k

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Modeling the Catalytic Cycle of Glutathione Peroxidase by Nuclear Magnetic Resonance Spectroscopic Analysis of Selenocysteine Selenenic Acids2021

    • Author(s)
      Masuda Ryosuke、Kimura Ryutaro、Karasaki Takafumi、Sase Shohei、Goto Kei
    • Journal Title

      Journal of the American Chemical Society

      Volume: 143 Issue: 17 Pages: 6345-6350

    • DOI

      10.1021/jacs.1c02383

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Modeling of Biologically Relevant Chemical Transformations Involving Thionitrates2019

    • Author(s)
      Shohei Sase and Kei Goto
    • Journal Title

      Phosphorus, Sulfur Silicon and the Related Elements

      Volume: 194 Issue: 7 Pages: 771-773

    • DOI

      10.1080/10426507.2019.1603726

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Visualizing Sulfur with X-rays: From Molecules to Tissues2019

    • Author(s)
      Graham N. George, Ingrid J. Pickering, Julien J. H. Cotelesage, Linda I. Vogt, Natalia V. Dolgova, Nathan Regnier, Dimosthenis Sokaras, Thomas Kroll, Eileen Y. Sneeden, Mark J. Hackett, Kei Goto, and Eric Block
    • Journal Title

      Phosphorus, Sulfur Silicon and the Related Elements

      Volume: 194 Issue: 7 Pages: 618-623

    • DOI

      10.1080/10426507.2019.1602618

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Presentation] 分子キャビティを活用したペルチオスルフェン酸の構造と反応性の解明2022

    • Author(s)
      後藤真人,佐藤有里紗,鍬野 哲,後藤 敬
    • Organizer
      日本化学会第102春季年会
    • Related Report
      2021 Annual Research Report
  • [Presentation] レードルドセレノペプチドを活用した甲状腺ホルモン活性化酵素の作用機序と阻害に関するモデル研究2022

    • Author(s)
      増田涼介,鍬野 哲,佐瀬祥平,後藤 敬
    • Organizer
      日本化学会第102春季年会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Design and Application of Molecular Cavities for Modeling Cysteine-derived Reactive Intermediates2022

    • Author(s)
      Kei Goto
    • Organizer
      29th International Symposium on the Organic Chemistry of Sulfur
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Construction and Application of Molecular Cradles for Modeling Reactive Intermediates of Selenoenzymes2022

    • Author(s)
      Kei Goto
    • Organizer
      25th IUPAC Conference on Physical Organic Chemistry
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 単離可能なヨウ化セレネニルを用いるアルケンのオキシセレン化およびアミノセレン化反応2022

    • Author(s)
      鍬野 哲,髙橋絵里歌,石川 陽,菊島 潤,佐瀬祥平,後藤 敬
    • Organizer
      第25回ヨウ素学会シンポジウム
    • Related Report
      2021 Annual Research Report
  • [Presentation] 活性化学種の反応制御を指向した分子キャビティの設計と応用2022

    • Author(s)
      後藤 敬
    • Organizer
      2022年有機反応機構研究会
    • Related Report
      2021 Annual Research Report
    • Invited
  • [Presentation] 分子クレードルを活用したヨードチロニンデヨージナーゼ活性中間体のモデル研究2022

    • Author(s)
      鍬野 哲,増田涼介,後藤 敬
    • Organizer
      第32回基礎有機化学討論会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Modeling of Selenocysteine-Derived Reactive Species Utilizing a Nano-Sized Molecular Cavity as a Protective Cradle2022

    • Author(s)
      Kei Goto
    • Organizer
      15th International Conference on the Chemistry of Selenium and Tellurium
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 分子クレードルを活用したシステイン由来N-ヒドロキシスルフェンアミドの反応性の解明2022

    • Author(s)
      大髙勝太郎,山口美涼,鍬野 哲,後藤 敬
    • Organizer
      第49回有機典型元素化学討論会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 分子キャビティを活用したセレノプロテイン生合成に関わる活性中間体のモデル研究2022

    • Author(s)
      工藤 嵐,鍬野 哲,後藤 敬
    • Organizer
      第49回有機典型元素化学討論会
    • Related Report
      2021 Annual Research Report
  • [Presentation] ヨウ化セレネニルのアルケンに対する反応性解明とカスケード環化反応への応用2022

    • Author(s)
      菊島 潤,髙橋絵里歌,仲田孝明,鍬野 哲,後藤 敬
    • Organizer
      第49回有機典型元素化学討論会
    • Related Report
      2021 Annual Research Report
  • [Presentation] キャビティ型分子骨格により安定化されたペルチオスルフェン酸の合成、構造、および反応性2021

    • Author(s)
      後藤真人,佐藤有里紗,鍬野 哲,後藤 敬
    • Organizer
      第18回ホスト・ゲスト化学シンポジウム
    • Related Report
      2021 Annual Research Report
  • [Presentation] クレードル型N-アルキル基により内部修飾されたジペプチドの合成とシステイン由来活性化学種安定化への応用2021

    • Author(s)
      廣重誠也,鍬野 哲,佐瀬祥平,後藤 敬
    • Organizer
      第31回基礎有機化学討論会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 拡張分子クレードルを活用したSe-ニトロソセレノシステインの合成2021

    • Author(s)
      増田涼介,鍬野 哲,佐瀬祥平,後藤 敬
    • Organizer
      第48回有機典型元素化学討論会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 分子クレードルを活用したシステイン由来活性種と化学プローブとの反応に関するモデル研究2021

    • Author(s)
      大髙 勝太郎,増田涼介,鍬野 哲,後藤 敬
    • Organizer
      第48回有機典型元素化学討論会
    • Related Report
      2021 Annual Research Report
  • [Presentation] クレードルドセレノペプチドを活用したGPx1およびGPx4の触媒サイクルに関するモデル研究2021

    • Author(s)
      増田涼介,佐瀬祥平,鍬野 哲,後藤 敬
    • Organizer
      日本化学会第101春季年会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 安定なセレノシステイン由来セレネン酸を用いたGPx1およびGPx4の触媒サイクルに関するモデル研究2020

    • Author(s)
      増田涼介,佐瀬祥平,後藤 敬
    • Organizer
      生命金属に関する合同年会2020
    • Related Report
      2020 Annual Research Report
  • [Presentation] システインチオールとHNO供与体との反応における活性中間体の直接合成および反応性の解明2020

    • Author(s)
      山口美涼,佐瀬祥平,後藤 敬
    • Organizer
      第47回有機典型元素化学討論会
    • Related Report
      2020 Annual Research Report
  • [Presentation] クレードル骨格を有するN-アリールメチルシステイン誘導体の合成2020

    • Author(s)
      廣重誠也,佐瀬祥平,後藤 敬
    • Organizer
      第47回有機典型元素化学討論会
    • Related Report
      2020 Annual Research Report
  • [Presentation] Model Study on the Reaction Mechanism of GPx: Synthesis and Elucidation of Reactivities of Selenopeptide-derived Selenenic Acids2020

    • Author(s)
      Ryosuke Masuda, Takafumi Karasaki, Ryutaro Kimura, Shohei Sase, and Kei Goto
    • Organizer
      日本化学会第100春季年会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 安定なシステイン由来N-ヒドロキシスルフェンアミドの合成とその反応性の解明2020

    • Author(s)
      山口美涼,佐瀬祥平,後藤 敬
    • Organizer
      日本化学会第100春季年会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Construction of the Synthetic Model System for Selenocysteine-Derived Reactive Species by Utilizing a Molecular Cradle2019

    • Author(s)
      Kei Goto
    • Organizer
      8th Workshop of the International Network on Selenium Sulphur and Redox Catalysis
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Synthesis and Reactions of Selenocysteine-Derived Selenenic Acids Stabilized by a Nano-Sized Molecular Cradle2019

    • Author(s)
      Kei Goto
    • Organizer
      14th International Conference on the Chemistry of Selenium and Tellurium
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Model Study of the Reactions of a GPx-Derived Selenenic Acid by Utilizing a Selenopeptide Incorporated in a Molecular Cradle2019

    • Author(s)
      Ryosuke Masuda, Shohei Sase, and Kei Goto
    • Organizer
      14th International Conference on the Chemistry of Selenium and Tellurium
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] GPx由来高反応性化学種の合成と作用機序に関するモデル研究への応用2019

    • Author(s)
      増田涼介,佐瀬祥平,後藤 敬
    • Organizer
      第5回日本セレン研究会
    • Related Report
      2019 Annual Research Report
  • [Presentation] GPx活性中心ペプチドの新規モデル系の構築と作用機序解明への応用2019

    • Author(s)
      増田涼介,佐瀬祥平,後藤 敬
    • Organizer
      第46回有機典型元素化学討論会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 分子クレードルを活用したシステイン由来N-ヒドロキシスルフェンアミドの反応性に関するモデル研究2019

    • Author(s)
      山口美涼,佐瀬祥平,後藤 敬
    • Organizer
      第46回有機典型元素化学討論会
    • Related Report
      2019 Annual Research Report

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Published: 2019-04-18   Modified: 2025-01-30  

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