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Multiscale modeling of radical diffusion and radical reactions on interstellar ices

Research Project

Project/Area Number 19K03940
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Review Section Basic Section 17010:Space and planetary sciences-related
Research InstitutionHokkaido University

Principal Investigator

Sameera W.M.C.  北海道大学, 低温科学研究所, 特任助教 (90791278)

Project Period (FY) 2019-04-01 – 2022-03-31
Project Status Completed (Fiscal Year 2021)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2021: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2020: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2019: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
KeywordsRadicals on ice surfaces / Binding energy / Reaction mechanisms / DFT / QM/MM / Interstellar medium / Radical species / QM/MM methods / astrochemistry / radical diffusion
Outline of Research at the Start

Calculations of diffusion rates of radicals and reaction barriers of radical reactions on interstellar ices play a key role in establishing the mechanisms for complex molecules formation in the interstellar medium. In this direction, for the first time, I combine quantum chemistry and scientific computing to study interstellar radical species diffusion and reactions on ice in broad sense.

Outline of Final Research Achievements

A range of binding energies was observed for OH radical (0.06-0.74 eV). (Phys. Rev. Lett. A, 2020, 102, 052822) OH anion on ice can be transported to ice bulk through the proton hole transfer, giving rise to a negative current (J. Phys. Chem. Lett. 2021, 12, 1, 704-710)
A range of binding energies, 0.10-050 eV, was also observed for CH3O radical on ices. (J. Phy. Chem. A, 2021, 125, 1, 387-393) Quantum chemical calculations rationalized the radical reaction mechanisms on ices; PH3 + D (Astrophys. J. 2021. 198, 73), OCS + H (Astrophys. J. 2021, 922, 146)
I have summarized the results in a review; W. M. C. Sameera et al., Astron. Space Sci. 2022. (Accepted). DOI: 10.3389/fspas.2022.890161

Academic Significance and Societal Importance of the Research Achievements

Computed radical adsorption and reactions on ices are vital in understanding mechanisms of formation of complex organic molecules in interstellar medium. The project involved collaborations with the researchers in Japan and Sweden. Thus, the project would be beneficial for astrochemistry research.

Report

(4 results)
  • 2021 Annual Research Report   Final Research Report ( PDF )
  • 2020 Research-status Report
  • 2019 Research-status Report
  • Research Products

    (23 results)

All 2022 2021 2020 2019 Other

All Journal Article (5 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 5 results,  Open Access: 2 results) Presentation (14 results) (of which Int'l Joint Research: 14 results,  Invited: 3 results) Book (2 results) Remarks (2 results)

  • [Journal Article] Experimental and Computational Studies on the Physicochemical Behavior of Phosphine Induced by Reactions with H and D Atoms on Interstellar Ice Grains2021

    • Author(s)
      Nguyen Thanh、Oba Yasuhiro、Sameera W. M. C.、Kouchi Akira、Watanabe Naoki
    • Journal Title

      The Astrophysical Journal

      Volume: 918 Issue: 2 Pages: 73-73

    • DOI

      10.3847/1538-4357/ac0cf4

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Successive H-atom Addition to Solid OCS on Compact Amorphous Solid Water2021

    • Author(s)
      Nguyen Thanh、Oba Yasuhiro、Sameera W. M. C.、Kouchi Akira、Watanabe Naoki
    • Journal Title

      The Astrophysical Journal

      Volume: 922 Issue: 2 Pages: 146-146

    • DOI

      10.3847/1538-4357/ac2238

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Delivery of electrons by proton-hole transfer in ice at 10 K: Role of surface OH radicals2021

    • Author(s)
      K. Kitajima, Y. Nakai, W. M. C. Sameera, M. Tsuge, A. Miyazaki, H. Hidaka, A. Kouchi, N. Watanabe
    • Journal Title

      J. Phys. Chem. Lett.

      Volume: 12 Issue: 1 Pages: 704-710

    • DOI

      10.1021/acs.jpclett.0c03345

    • Related Report
      2020 Research-status Report
    • Peer Reviewed
  • [Journal Article] CH3O radical binding on hexagonal water ice and amorphous solid water2021

    • Author(s)
      W. M. C. Sameera, B. Senevirathne, S. Andersson, M. Al-lbadi, H. Hidaka, A. Kouchi, G. Nyman, N. Watanabe
    • Journal Title

      J. Phy. Chem. A

      Volume: 125 Issue: 1 Pages: 387-393

    • DOI

      10.1021/acs.jpca.0c09111

    • Related Report
      2020 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Photostimulated desorption of OH radicals from amorphous solid water: Evidence for the interaction of visible light with an OH-ice complex2020

    • Author(s)
      A. Miyazaki, N. Watanabe, W. M. C. Sameera, Y. Nakai, M. Tsuge, T. Hama, H. Hidaka, A. Kouchi
    • Journal Title

      Phys. Rev. A

      Volume: 102 Issue: 5 Pages: 052822-052822

    • DOI

      10.1103/physreva.102.052822

    • Related Report
      2020 Research-status Report
    • Peer Reviewed
  • [Presentation] PyQM/MM for subtractive QM/MM calculations with the AMOEBA09 polarisable force field2021

    • Author(s)
      P. V. G. M. Rathnayake, W. M. C. Sameera, N. Watanabe
    • Organizer
      CECAM Virtual Winter School for Computational Chemistry
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Quantum chemical determination of the complex organic molecules formation in the interstellar medium2021

    • Author(s)
      W. M. C. Sameera
    • Organizer
      Next Generation Astrochemistry Symposium
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Quantum chemical modelling of chemical reactions2021

    • Author(s)
      W. M. C. Sameera
    • Organizer
      The 10th annual science research sessions, The South Eastern University of Sri Lanka
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] PyQMMM for modelling chemical processes in the interstellar medium2021

    • Author(s)
      P. V. G. M. Rathnayake, W. M. C. Sameera, N. Watanabe
    • Organizer
      Workshop on Interstellar Matter 2021
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Detection of photodesorption OH radicals from H2O ice surface by visible light2021

    • Author(s)
      A. Miyazaki, N. Watanabe, W. M. C. Sameera, Y. Nakai, M. Tsuge, T. Hama, H. Hidaka, A. Kouchi
    • Organizer
      Workshop on Interstellar Matter 2021
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] A new electrochemical property of ice: negative charge transport triggered by reactions of surface OH radicals with electrons2021

    • Author(s)
      K. Kitajima, Y. Nakai, W. M. C. Sameera, M. Tsuge, A. Miyazaki, H. Hidaka, A. Kouchi, N. Watanabe
    • Organizer
      Workshop on Interstellar Matter 2021
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Radical species on interstellar ices: a quantum chemical study2021

    • Author(s)
      W. M. C. Sameera, A. Miyazaki, K. Kitajima, N. Watanabe
    • Organizer
      The 15th annual meeting for Japan Society for Molecular Science 2021
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Radical processes on interstellar ices: A combined experimental and quantum chemical study2021

    • Author(s)
      W. M. C. Sameera, A. Miyazaki, K. Kitajima, N. Watanabe
    • Organizer
      ACS Fall 2021 National Meeting in Atlanta
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Radical species on interstellar ices: a quantum mechanics/molecular mechanics study2020

    • Author(s)
      W. M. C. Sameera
    • Organizer
      CICO-VICO Fall 2020 Workshop
    • Related Report
      2020 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Advances and challenges in modelling reaction mechanisms2020

    • Author(s)
      W. M. C. Sameera
    • Organizer
      Department of Chemistry School of Life Sciences, University of Sussex, UK
    • Related Report
      2020 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] OH anions and OH radicals on amorphous ice: a combined experimental and quantum chemical study.2019

    • Author(s)
      W. M. C. Sameera, N. Watanabe
    • Organizer
      The 2nd ICReDD International Symposium, Hokkaido University, Japan.
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research
  • [Presentation] OH radical on interstellar ices: a quantum chemical study.2019

    • Author(s)
      W. M. C. Sameera, A. Miyazaki, N. Watanabe.
    • Organizer
      IAU Symposium 350 Laboratory Astrophysics: from Observations to Interpretation. Jesus College, Cambridge, UK.
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research
  • [Presentation] Combining modern force fields with ONIOM(QM:MM): the SICTWO interface.2019

    • Author(s)
      W. M. C. Sameera.
    • Organizer
      The Asia-Pacific Association of Theoretical and Computational Chemists (APATCC), Sydney, Australia.
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research
  • [Presentation] On the reaction mechanisms: quantum mechanics/molecular mechanics (QM/MM) studies.2019

    • Author(s)
      W. M. C. Sameera, N. Watanabe
    • Organizer
      The 1st Symposium International on Hybrid Catalysis for Enabling Molecular Synthesis on Demand, Tokyo University, Japan.
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research
  • [Book] Transition Metal Catalyzed Cross-coupling and Nitrogen Reduction Reactions: Lessons from Computational Studies2022

    • Author(s)
      W. M. C. Sameera, Y. Takeda, Y. Ohki
    • Publisher
      Elsevier
    • Related Report
      2021 Annual Research Report
  • [Book] Automated Mechanism Discovery, Comprehensive Computational Chemistry2022

    • Author(s)
      W. M. C. Sameera, Y. Sumiya, B. B. Skjelstad, S. Maeda
    • Publisher
      Elsevier
    • Related Report
      2021 Annual Research Report
  • [Remarks] Astrophysical Chemistry /Ice& Planetary Science

    • URL

      http://www.lowtem.hokudai.ac.jp/astro/index.html

    • Related Report
      2021 Annual Research Report
  • [Remarks] Astrophysical Chemistry/Ice&Planetary Science

    • URL

      http://www.lowtem.hokudai.ac.jp/astro/index.html

    • Related Report
      2020 Research-status Report

URL: 

Published: 2019-04-18   Modified: 2023-01-30  

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