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Encapsulation of alpha-synuclein oligomers into a protein cage to elucidate the dynamic behavior.

Research Project

Project/Area Number 19K15695
Research Category

Grant-in-Aid for Early-Career Scientists

Allocation TypeMulti-year Fund
Review Section Basic Section 37010:Bio-related chemistry
Research InstitutionTokyo Institute of Technology

Principal Investigator

Maity Basudev  東京工業大学, 生命理工学院, 特任助教 (60815421)

Project Period (FY) 2019-04-01 – 2021-03-31
Project Status Completed (Fiscal Year 2020)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2020: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2019: ¥2,860,000 (Direct Cost: ¥2,200,000、Indirect Cost: ¥660,000)
KeywordsFerritin / Amyloid beta oligomer / High-speed AFM / Ferritin cage / Alpha-synuclein oligomer / Dynamics / Alpha-synuclein / Nanoscale dynamics
Outline of Research at the Start

The proposed research plan is outlined in the three following parts.
(a) Preparation of the α-syn fused ferritin and characterization.
(b) Determination of the atomic structures by X-ray crystallography.
(c) Dynamical properties study by high-speed AFM and MD simulations.

Outline of Final Research Achievements

We fused the amylogenic peptides such as Amyloid beta (1-42) and Alpha-synuclein (61-95) at the C-terminal of the ferritin cage and thus, encapsulated a precise number of foreign peptides in vivo into the cage. Analytic assays like ThT and FT-IR confirmed the presence of beta-sheet structure inside the cage. We used high-speed AFM to visualize the encapsulated peptide oligomers by disassembling the ferritin cage at pH2.0. We observed that the amyloid core was surrounded by the ferritin subunits. The amyloid core showed dynamic behavior which changing the globular shape to linear over time. Unlike amyloid beta peptide, the alpha-synuclein oligomer dissociates with time. Overall, our studies demonstrated the precise encapsulation of amylogenic peptides into a restricted space which usually difficult to study in solution.

Academic Significance and Societal Importance of the Research Achievements

Since the role of amylogenic peptides in brain disease is not clear yet, our current study is expected to be a useful from the view point of oligomer specific drug discovery because our system can isolate a precise oligomer and study the dynamic behavior of the oligomer in a confined environment.

Report

(3 results)
  • 2020 Annual Research Report   Final Research Report ( PDF )
  • 2019 Research-status Report
  • Research Products

    (4 results)

All 2020 2019

All Journal Article (1 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 1 results) Presentation (3 results) (of which Int'l Joint Research: 2 results)

  • [Journal Article] Recent progresses in the accumulation of metal ions into the apo-ferritin cage: Experimental and theoretical perspectives2019

    • Author(s)
      Maity Basudev、Hishikawa Yuki、Lu Diannan、Ueno Takafumi
    • Journal Title

      Polyhedron

      Volume: 印刷中 Pages: 104-111

    • DOI

      10.1016/j.poly.2019.03.048

    • Related Report
      2019 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Presentation] Encapsulation of a precisely defined amyloid beta peptide oligomer into the confine environment of ferritin cage2020

    • Author(s)
      Basudev Maity
    • Organizer
      Biorelated chemistry Symposium
    • Related Report
      2020 Annual Research Report
  • [Presentation] Disassembly reaction of the ferritin cage observed by high-speed AFM2020

    • Author(s)
      Basudev Maity
    • Organizer
      100th Annual Meeting of the Chemical Society of Japan 2020
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research
  • [Presentation] High-speed AFM observation of ferritin cage disassembly in solution2019

    • Author(s)
      Basudev Maity
    • Organizer
      The first international symposium on Molecular Engine.
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research

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Published: 2019-04-18   Modified: 2022-01-27  

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