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Regulation of intracellular vesicle transport by small GTPase cycles

Research Project

Project/Area Number 20247011
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Functional biochemistry
Research InstitutionThe University of Tokyo

Principal Investigator

KATADA Toshiaki  The University of Tokyo, 大学院・薬学系研究科, 教授 (10088859)

Co-Investigator(Kenkyū-buntansha) KONTANI Kenji  東京大学, 大学院・薬学系研究科, 准教授 (30302615)
KAJIHO Hiroaki  東京大学, 大学院・薬学系研究科, 助教 (70401221)
FUKUYAMA Masamitsu  東京大学, 大学院・薬学系研究科, 助教 (20422389)
KOBAYASHI Tetsuo  東京大学, 大学院・薬学系研究科, 助教 (80433994)
Project Period (FY) 2008 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥42,900,000 (Direct Cost: ¥33,000,000、Indirect Cost: ¥9,900,000)
Fiscal Year 2010: ¥14,950,000 (Direct Cost: ¥11,500,000、Indirect Cost: ¥3,450,000)
Fiscal Year 2009: ¥14,950,000 (Direct Cost: ¥11,500,000、Indirect Cost: ¥3,450,000)
Fiscal Year 2008: ¥13,000,000 (Direct Cost: ¥10,000,000、Indirect Cost: ¥3,000,000)
Keywordsタンパク質 / 遺伝子 / シグナル伝達 / G蛋白質 / 小胞輸送 / リソソーム / Gサイクル / ゲノムプロジェクト / Processing body
Research Abstract

G proteins, which cycle between the two different GTP- and GDP-bound conformations (G cycles), play important roles as a "molecular switch" in many intracellular signaling pathways. In the Grant-in-Aid for Scientific Research (A), we investigated how G cycles are regulated dependent on their modes of actions in intracellular vesicle transport and found that novel G proteins containing unique biochemical properties and/or structures are involved in the regulation of endosome dynamics, such as lysosome biogenesis, endocytosis, and exocytosis.

Report

(4 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • 2008 Annual Research Report
  • Research Products

    (39 results)

All 2011 2010 2009 2008 Other

All Journal Article (25 results) (of which Peer Reviewed: 9 results) Presentation (10 results) Remarks (4 results)

  • [Journal Article] Characterization of RIN3 as a guanine-nucleotide exchange factor for the Rab5-subfamily GTPase Rab31.2011

    • Author(s)
      Kajiho H, Sakurai, K, Minoda T, Yoshikawa M, Nakagawa S, Fukushima S, Kontani K, Katada T
    • Journal Title

      J.Biol.Chem.

    • Related Report
      2010 Final Research Report
  • [Journal Article] cTAGE5 mediates collagen secretion through interaction with TANGO1 at endoplasmic reticulum exit sites2011

    • Author(s)
      Saito K, Yamashiro K, Ichikawa Y, Erlmann P, Kontani K, Malhotra V, Katada T
    • Journal Title

      Mol.Biol.Cell.

    • Related Report
      2010 Final Research Report
  • [Journal Article] RASSF7 negatively regulates pro-apoptotic JNK signaling by inhibiting the activity of phosphorylated-MKK72011

    • Author(s)
      Takahashi S, Ebihara A, Kajiho H, Kontani K, Nishina H, Katada T
    • Journal Title

      Cell Death Differ 18

      Pages: 645-655

    • Related Report
      2010 Final Research Report
  • [Journal Article] RhoA activation participates in rearrangement of processing bodies and release of nucleated AU-rich mRNAs2011

    • Author(s)
      Takahashi S, Sakurai K, Ebihara A, Kajiho H, Saito K, Kontani K, Nishina H, Katada T
    • Journal Title

      Nucleic Acids Res 39

      Pages: 3446-3457

    • Related Report
      2010 Final Research Report
  • [Journal Article] RhoA activation participates in rearrangement of processing bodies and release of nucleated AU-rich mRNAs.2011

    • Author(s)
      Takahashi S, et al.
    • Journal Title

      Nucleic Acids Res.

      Volume: 39 in press(掲載確定)

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The Arf-like GTPase Arl8 mediates delivery of endocytosed macromolecules to lysosomes in Caenorhabditis elegans2010

    • Author(s)
      Nakae I, Fujino T, Kobayashi T, Sasaki A, Kikko Y, Fukuyama M, Gengyo-Ando K, Mitani S, Kontani K, Katada T
    • Journal Title

      Mol.Biol.Cell 21

      Pages: 2434-2442

    • Related Report
      2010 Final Research Report
  • [Journal Article] Joubert syndrome Arl13b functions at ciliary membranes and stabilizes protein transport in Caenorhabditis elegans2010

    • Author(s)
      Cevik S, Hori Y, Kaplan OI, Kida K, Toivenon T, Foley-Fisher C, Cottell D, Katada T, Kontani K, Blacque OE
    • Journal Title

      J.Cell Biol. 188

      Pages: 953-969

    • Related Report
      2010 Final Research Report
  • [Journal Article] Quantitative characterization of Tob interactions provides the thermodynamic basis for translation termination-coupled deadenylase regulation2010

    • Author(s)
      Ruan L, Osawa M, Hosoda N, Imai S, Machiyama A, Katada T, Hoshino S, Shimada I
    • Journal Title

      J.Biol.Chem. 285

      Pages: 27624-27631

    • Related Report
      2010 Final Research Report
  • [Journal Article] An Arf-like small G protein, ARL-8, promotes the axonal transport of presynaptic cargoes by suppressing vesicle aggregation2010

    • Author(s)
      Klassen MP, Wu YE, Maeder CI, Nakae I, Cueva JG, Lehrman EK, Tada M, Gengyo-Ando K, Wang GJ, Goodman M, Mitani S, Kontani K, Katada T, Shen K
    • Journal Title

      Neuron 66

      Pages: 710-723

    • Related Report
      2010 Final Research Report
  • [Journal Article] Gタンパク質研究の動向2010

    • Author(s)
      堅田利明
    • Journal Title

      細胞(The Cell) 42(3)

      Pages: 90-91

    • Related Report
      2010 Final Research Report
  • [Journal Article] アミノ酸シグナル伝達に介在するGタンパク質Rag2010

    • Author(s)
      春日秀文、福山征光、紺谷圏二、堅田利明
    • Journal Title

      細胞(The Cell) 42(3)

      Pages: 108-111

    • Related Report
      2010 Final Research Report
  • [Journal Article] The Arf-like GTPase Arl8 mediates delivery of endocytosed macromolecules to lysosomes in Caenorhabditis elegans.2010

    • Author(s)
      Nakae I, et al.
    • Journal Title

      Mol.Biol.Cell

      Volume: 21 Pages: 2434-2442

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] An Arf-like small G protein, ARL-8, promotes the axonal transport of presynaptic cargoes by suppressing vesicle aggregation.2010

    • Author(s)
      Klassen MP, et al.
    • Journal Title

      Neuron

      Volume: 66 Pages: 710-723

    • Related Report
      2010 Annual Research Report 2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Joubert syndrome Arl13b functions at ciliary membranes and stabilizes protein transport in Caenorhabditis elegans.2010

    • Author(s)
      Cevik S, et al.
    • Journal Title

      J.Cell Biol.

      Volume: 188 Pages: 953-969

    • Related Report
      2010 Annual Research Report 2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Gタンパク質研究の動向2010

    • Author(s)
      堅田利明
    • Journal Title

      細胞(The Cell)

      Volume: 42(3) Pages: 90-91

    • Related Report
      2010 Annual Research Report 2009 Annual Research Report
  • [Journal Article] The Arf-like GTPase Ar18 mediates delivery of endocytosed macromolecules to lysosomes in Caenorhabditis elegans.2010

    • Author(s)
      Nakae I, et al.
    • Journal Title

      Mol.Biol.Cell

      Volume: 21 Pages: 2434-2442

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Arf-like protein 13B2009

    • Author(s)
      Kontani K, Hori Y, Katada T
    • Journal Title

      Nature Molecule Pages

    • Related Report
      2010 Final Research Report
  • [Journal Article] Biochemical characterization of missense mutations in the Arf/Arl-family small GTPase Arl6 causing Bardet-Biedl syndrome2009

    • Author(s)
      Kobayashi T, Hori Y, Ueda N, Kajiho H, Muraoka S, Shima F, Kataoka T, Kontani K, Katada T
    • Journal Title

      Biochem.Biophys.Res.Commun. 381(3)

      Pages: 439-442

    • Related Report
      2010 Final Research Report
  • [Journal Article] Biochemical characterization of missense mutations in the Arf/Arl-family small GTPase Ar16 causing Bardet-Biedl syndrome2009

    • Author(s)
      Kobayashi T., et al.
    • Journal Title

      Biochem.Biophys.Res.Commun. 381

      Pages: 439-442

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Upf1 potentially serves as a RING-related E3 ubiquitin ligase via its association with Upf3 in yeast2008

    • Author(s)
      Takahashi S, Araki Y, Ohya Y, Sakuno T, Hoshino S, Kontani K, Nishina H, Katada T
    • Journal Title

      RNA 14

      Pages: 1950-1958

    • Related Report
      2010 Final Research Report
  • [Journal Article] Domain architecture of the atypical Arf-family GTPase Arl13b involved in cilia formation2008

    • Author(s)
      Hori Y, Kobayashi T, Kikko Y, Kontani K, Katada T
    • Journal Title

      Biochem.Biophys.Res.Commun. 373

      Pages: 119-124

    • Related Report
      2010 Final Research Report
  • [Journal Article] Tyr-phosphorylation signals translocate RIN3, the small GTPase Rab5-GEF, to early endocytic vesicles2008

    • Author(s)
      Yoshikawa M, Kajiho H, Sakurai K, Minoda T, Nakagawa S, Kontani K, Katada T
    • Journal Title

      Biochem.Biophys.Res.Commun. 372

      Pages: 168-172

    • Related Report
      2010 Final Research Report
  • [Journal Article] Tyr-phosphorylation signals translocate RIN3, the small GTPase Rab5-GEF, to early endocytic vesicles2008

    • Author(s)
      Yoshikawa M., et al.
    • Journal Title

      Biochem.Biophys.Res.Commun. 372

      Pages: 168-172

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Domain architecture of the atypical Arf-family GTPase Arll3b involved in cilia formation2008

    • Author(s)
      Hori Y., et al.
    • Journal Title

      Biochem.Biophys.Res.Commun. 373

      Pages: 119-124

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Upf1 potentially serves as a RING-related E3 ubiquitin ligase via its association with Upf3 in yeast2008

    • Author(s)
      Takahashi S., et al.
    • Journal Title

      RNA 14

      Pages: 1950-1958

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Presentation] 後期エンドソームとリソソームの融合・再形成過程に介在する低分子量G蛋白質Ar182009

    • Author(s)
      堅田利明、中江郁青、菊香順史、紺谷圏二
    • Organizer
      第82回日本生化学会大会
    • Place of Presentation
      神戸(シンポジウム講演)
    • Year and Date
      2009-10-23
    • Related Report
      2010 Final Research Report
  • [Presentation] The Arf-like GTPase Ar18 is required for lysosome biogenesis in C.elegans2009

    • Author(s)
      堅田利明, 紺谷圏二
    • Organizer
      IUPS 2009 : PSJ Symposium, VI-5 ; Recent progress on G-protein signalings
    • Place of Presentation
      Kyoto, Japan
    • Year and Date
      2009-07-28
    • Related Report
      2010 Final Research Report
  • [Presentation] The Arf-like GTPase Ar18 is required for lysosome biogenesis in C.elegans.2009

    • Author(s)
      Katada T., et al.
    • Organizer
      国際生理学会IUPS2009シンポジウム
    • Place of Presentation
      京都・京都国際会館
    • Year and Date
      2009-07-28
    • Related Report
      2009 Annual Research Report
  • [Presentation] The Arf-like GTPase Arl8 is required for lysosome biogenesis in C.elegans2009

    • Author(s)
      Katada T., et al.
    • Organizer
      国際生理学会IUPS2009シンポジウム
    • Place of Presentation
      京都・京都国際会館
    • Year and Date
      2009-07-28
    • Related Report
      2008 Annual Research Report
  • [Presentation] The Arf-like GTPase ARL-8 is required for lysosome biogenesis in C. elegans2009

    • Author(s)
      Nakae I, Fujino T, Kobayashi T, Kikko Y, Harada S, Fukuyama M, Gengyo-Ando K, Mitani S, Kontani K, Katada T
    • Organizer
      17th International C.elegans Meeting
    • Place of Presentation
      Los Angeles, CA, USA
    • Year and Date
      2009-06-27
    • Related Report
      2010 Final Research Report
  • [Presentation] Distinct control of survival, and somatic and germline development during L1 diapause by the insulin/IGF signaling and AMPK pathway2009

    • Author(s)
      Fukuyama M, Sakuma K, Astumi Y, Shimomura H, Kasuga H, Rougvie A, Katada T
    • Organizer
      17th International C.elegans Meeting
    • Place of Presentation
      Los Angeles, CA, USA
    • Year and Date
      2009-06-26
    • Related Report
      2010 Final Research Report
  • [Presentation] Tyr-phosphorylation signals translocate RIN3, the small GTPase Rab5-GEF, to early endocytic vesicles2008

    • Author(s)
      Kajiho H, Yoshikawa M, Sakurai K, Minoda T, Nakagawa S, Kontani K, Katada T
    • Organizer
      48th ASCB Annual Meeting
    • Place of Presentation
      米国、サンフランシスコ
    • Related Report
      2010 Final Research Report
  • [Presentation] 低分子量G蛋白質Ar18の神経細胞における機能解析2008

    • Author(s)
      中江郁青、安藤恵子、三谷昌平、紺谷圏二、堅田利明
    • Organizer
      ファーマ・バイオフォーラム2008
    • Place of Presentation
      東京【優秀発表賞】(口頭発表)
    • Related Report
      2010 Final Research Report
  • [Presentation] 低分子量G蛋白質Rhoファミリーは新規細胞内構造体P-bodyの形成を制御する2008

    • Author(s)
      櫻井京子、高橋真也、蛯原有沙、梶保博昭、仁科博史、堅田利明
    • Organizer
      文部科学省特定領域研究「細胞情報ネットワークを統合するG蛋白質シグナル研究の新展開」班会議
    • Place of Presentation
      湯沢【最優秀発表賞】(ポスター発表)
    • Related Report
      2010 Final Research Report
  • [Presentation] 細胞のシグナル伝達系に介在するGタンパク質:三量体Gタンパク質Giの発見からGタンパク質が果たす役割の拡大に向けて2008

    • Author(s)
      堅田利明
    • Organizer
      産業医科大学大学院イニシアティブワークショップ2008
    • Place of Presentation
      北九州(特別講演)
    • Related Report
      2010 Final Research Report
  • [Remarks] 研究室ホームページ

    • URL

      http://www.f.u-tokyo.ac.jp/~seiri

    • Related Report
      2010 Final Research Report
  • [Remarks]

    • URL

      http://www.f.u-tokyo.ac.jp/-seiri

    • Related Report
      2010 Annual Research Report
  • [Remarks]

    • URL

      http://www.f.u-tokyo.ac.jp/~seiri

    • Related Report
      2009 Annual Research Report
  • [Remarks]

    • URL

      http://www.f.u-tokyo.ac.jp/~seiri

    • Related Report
      2008 Annual Research Report

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Published: 2008-04-01   Modified: 2016-04-21  

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