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Studies on the mechanisms of leaf formation from the viewpoint of shoot meristem function

Research Project

Project/Area Number 20248001
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Breeding science
Research InstitutionThe University of Tokyo

Principal Investigator

NAGATO Yasuo  The University of Tokyo, 大学院・農学生命科学研究科, 教授 (10143413)

Co-Investigator(Kenkyū-buntansha) ITOH JunーIchi  東京大学, 大学院・農学生命科学研究科, 准教授 (30345186)
Project Period (FY) 2008 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥47,060,000 (Direct Cost: ¥36,200,000、Indirect Cost: ¥10,860,000)
Fiscal Year 2010: ¥11,960,000 (Direct Cost: ¥9,200,000、Indirect Cost: ¥2,760,000)
Fiscal Year 2009: ¥13,390,000 (Direct Cost: ¥10,300,000、Indirect Cost: ¥3,090,000)
Fiscal Year 2008: ¥21,710,000 (Direct Cost: ¥16,700,000、Indirect Cost: ¥5,010,000)
Keywordsシュートメリステム / イネ / 突然変異 / 葉パターン / 葉間期 / SAM / ADL遺伝子 / PLA遺伝子 / NDL1遺伝子 / WAF1遺伝子 / 育種学 / 発生・分化 / 発現制御 / 遺伝学
Research Abstract

This research project has been carried out to reveal the mechanisms of leaf formation in relation to shoot meristem. We identified WAF1 gene that was associated with shoot meriatem maintenance and leaf morphogenesis. WAF1 functions in the regulation of small RNAa. As for temporal regulation of leaf primordium formation, we newly identified PLA3 gene. Together with the results of PLA1 and PLA2, it is indicated that signals from preexisting leaf primordia play important role on the formation of new leaf primordium. We also identified genes that regulate adaxial-abaxial, central-lateral and basal-apical patterns of leaves.

Report

(4 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • 2008 Annual Research Report
  • Research Products

    (55 results)

All 2011 2010 2009 2008

All Journal Article (24 results) (of which Peer Reviewed: 24 results) Presentation (31 results)

  • [Journal Article] Ovule is a lateral organ finally differentiated from the terminating floral meristem in rice.2011

    • Author(s)
      Yamaki S, Nagato Y., Kurata N., Nonomura K-I.
    • Journal Title

      Dev.Biol. 351

      Pages: 208-216

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Ovule is a lateral organ finally differentiated from the terminating floral meristem in rice2011

    • Author(s)
      Yamaki, S., Nagato, Y., Kurata, N., Nonomura, KI.
    • Journal Title

      Develop, ental Biology

      Volume: 351 Pages: 208-216

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Ovule is a lateral organ finally differentiated from the terminating floral meristem in rice2011

    • Author(s)
      Yamaki, S., Nagato, Y., Kurata, N., Nonomura, K-I.
    • Journal Title

      Develop,ental Biology

      Volume: 3 Pages: 208-216

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] WAVY LEAF 1, an ortholog of Arabidopsis HEN1, regulates shoot development by maintaining microRNA and trans-acting siRNA accumulation in rice.2010

    • Author(s)
      Abe M., Yoshikawa T., Nosaka M., Sakakibara H., Sato Y., Nagato Y., Itoh J.-I.
    • Journal Title

      Plant Physiol. 154

      Pages: 1335-1346

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Abe, M., Yoshikawa, T., Nosaka, M., Sakakibara, H., Sato, Y., Nagato, Y.and Rob, J.I.(2010) WAVYLEAF 1, an ortholog of Arabidopsis HEM, regulates shoot development by maintaining microRNA and trans-acting siRNA accumulation in rice2010

    • Author(s)
      Abe, M., Yoshikawa, T., Nosaka, M., Sakakibara, H., Sato, Y., Nagato, Y., Itoh, J.I.
    • Journal Title

      Plant Physiology

      Volume: 154 Pages: 1335-1346

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mappring and characterization of the rice gene, CLUB-SHAPED EMBRYO3, CLE3.2010

    • Author(s)
      Imamura, K.Nagato, Y., Matsuoka, M., Kitano, H., Sazuka, T
    • Journal Title

      Rice Genetics Newsletter

      Volume: 25 Pages: 127-129

    • Related Report
      2010 Annual Research Report 2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Studies of sodium bypass flow in lateral rootless mutant Lrt1, Lrt2 and crown rootless mutant Crll of rice (Oryza sativa L.)2010

    • Author(s)
      Faiyue, B., Vijayalakshim, C., Nawaz, S., Nagato, Y., Taketa, S., Ichii, M., Al-Azzawi, Flowers, T.
    • Journal Title

      Plant Cell Environment

      Volume: 33:00:00 Pages: 687-701

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Abe, M., Yoshikawa, T., Nosaka, M., Sakakibara, H., Sato, Y., Nagato, Y. and Itoh, J.-I. (2010) WAVY LEAF 1, an ortholog of Arabidopsis HEN1, regulates shoot development by maintaining microRNA and trans-acting siRNA accumulation in rice2010

    • Author(s)
      Abe, M.,, Yoshikawa, T., Nosaka, M., Sakakibara, H., Sato, Y., Nagato, Y., Itoh, J.-I.
    • Journal Title

      Plant Physiology

      Volume: 154 Pages: 1335-1346

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Studies of sodium bypass flow in lateral rootless mutant Lrt1, Lrt2 and crown rootless mutant Crl1 of rice (Oryza sativa L.)2010

    • Author(s)
      Faiyue, B., Vijayalakshim, C., Nawaz, S., Nagato, Y., Taketa, S., Ichii, M., Al-Azzawi, Flowers, T.
    • Journal Title

      Plant Cell Environment

      Volume: 33:00:00 Pages: 687-701

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] MOSAIC FLORAL ORGANS1, an AGL6-Like MADS-Box gene, controls floral organ identity and meristem fate in rice.2009

    • Author(s)
      Ohmor S., Kimizu M., Sugita M., Miyao A., Hirochika H., Uchida E., Nagato Y., Yohida, H.
    • Journal Title

      Plant Cell 21

      Pages: 3008-3025

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] A rice tryptophan deficient dwarf 1 mutant, tdd1, contains a reduced level of Indole acetic acid and develops abnormal flowers and organless embryos.2009

    • Author(s)
      Sazuka T., Kamiya N., Nushimura T., Ashikari M., Ohmae K., Imamura K., Nagato Y., Koshiba T., Kitano H., Matsuoka M.
    • Journal Title

      Plant J. 60

      Pages: 227-241

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] The ADAXIALIZED LEAF1 gene functions in leaf and embryonic pattern formation lin rice.2009

    • Author(s)
      Hibara K., Obara M., E.Hayashida, Ishimaru T., Abe M., Satoh H., Itoh J.-I., Nagato Y.
    • Journal Title

      Dev.Biol. 334

      Pages: 345-354

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] PLASTOCHRON3/GOLOATH encodes a glutamate carboxypeptidase required for proper development in rice.2009

    • Author(s)
      Kawakatsu T., Taramino G., Itoh J.-I., Allen J., Sato Y., Hng S.-K., Nagasawa N., Kojima M., Kusaba M., Sakakibara H., Sakai H., Nagato Y.
    • Journal Title

      Plant J. 58

      Pages: 1028-1040

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] OPEN BEAK is a negative regulator of class 1 knox genes and a positive regulator of class B floral homeotic gene in rice.2009

    • Author(s)
      Horigome A., Nagasawa N., Ikeda K., Ito M., Itoh J.-I., Nagato Y.
    • Journal Title

      Plant J. 58

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] PLASTOCHRON3/GOLOATH encodes a glutamate carboxypeptidase required for proper development in rice2009

    • Author(s)
      Kawakatsu, T.
    • Journal Title

      Plant Journal 58

      Pages: 1028-1040

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] OPEN BEAK is a negative regulator of class 1 knox genes and a positive regulator of class B floral homeotic gene in ric2009

    • Author(s)
      Horigome, A.
    • Journal Title

      Plant Journal 58

      Pages: 724-736

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Genetically engineered rice that contains higher amounts of nicotianamine to enhance the antihypertensive effect2009

    • Author(s)
      Usuda, K.
    • Journal Title

      Plant Biotechnology Journal 7

      Pages: 87-95

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] SHOOT ORGANIZATION2 gene coordinates leaf domain development along the central-marginal axis in rice.2008

    • Author(s)
      Itoh J.-I., Sato Y., Nagato Y.
    • Journal Title

      Plant Cell Physiol. 49

      Pages: 1226-1236

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Developmental role and auxin responsibility of class III HD-ZIP gene family members in rice.2008

    • Author(s)
      Itoh J.-I., Hibara K., Sato Y., Nagato Y.
    • Journal Title

      Plant Physiol. 147

      Pages: 1960-1975

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] The rice FLATTENED SHOOT MERISTEM, encoding chromatin assembly factor-1 p150 subunit, is required for meristem maintenance by regulating cell-cycle period.2008

    • Author(s)
      Abe M., Kuroshita H., Umeda M., Itoh J.-I., Nagato, Y.
    • Journal Title

      Dev.Biol. 319

      Pages: 384-393

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] SHOOT ORGANIZATION2 gene coordinates leaf domain development along the central-marginal axis in rice2008

    • Author(s)
      Itoh, J.-I.
    • Journal Title

      Plant & Cell Physiology 49

      Pages: 1226-1236

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Developmental role and auxin responsibility of class III HD-ZIP gene family members in rice2008

    • Author(s)
      Itoh, J.-I.
    • Journal Title

      Plant Physiology 147

      Pages: 1960-1975

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] FLATTENED SHOOT MERISTEM, encoding chromatin assembly factor-1 p150 subunit, is required for meristem maintenance by regulating cell-cycle period2008

    • Author(s)
      Abe, M.
    • Journal Title

      Developmental Biology 319

      Pages: 384-393

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] MNU-induced mutant pools and high performance TILLING enable finding of any gene mutation in rice2008

    • Author(s)
      Suzuki, T.
    • Journal Title

      Mol.Genet.Genomics 279

      Pages: 213-223

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Presentation] イネのvegetative phase changeに関わる変異体の解析2011

    • Author(s)
      田中伸裕・伊藤博紀・千徳直樹・榊原均・井澤毅・伊藤純一・長戸康郎
    • Organizer
      日本育種学会
    • Place of Presentation
      横浜市立大学
    • Year and Date
      2011-03-29
    • Related Report
      2010 Annual Research Report
  • [Presentation] リボソームタンパク遺伝子がイネの初期生育に及ぼす影響2011

    • Author(s)
      細木渉・伊藤純一・長戸康郎
    • Organizer
      日本育種学会
    • Place of Presentation
      横浜市立大学
    • Year and Date
      2011-03-29
    • Related Report
      2010 Annual Research Report
  • [Presentation] イネvegetative phase changeに関わる変異体の解析2011

    • Author(s)
      田中伸裕・伊藤博紀・千徳直樹・榊原均・井澤毅・伊藤純一・長戸康郎
    • Organizer
      日本育種学会
    • Place of Presentation
      横浜市立大学(神奈川県)
    • Year and Date
      2011-03-29
    • Related Report
      2009 Annual Research Report
  • [Presentation] リボゾームタンパク遺伝子がイネの初期生育に及ぼす影響2011

    • Author(s)
      細木渉・伊藤純一・長戸康郎
    • Organizer
      日本育種学会
    • Place of Presentation
      横浜市立大学(神奈川県)
    • Year and Date
      2011-03-29
    • Related Report
      2009 Annual Research Report
  • [Presentation] plastochron変異体のホルモン応答性と原因遺伝子の過剰発現2010

    • Author(s)
      三村真生・伊藤純一・長戸康郎
    • Organizer
      日本育種学会第118回講演会
    • Place of Presentation
      秋田県立大学(秋田県)
    • Year and Date
      2010-09-25
    • Related Report
      2010 Final Research Report
  • [Presentation] イネSLENDER LEAF1遺伝子の解析2010

    • Author(s)
      吉川貴徳・伊藤純一・長戸康郎
    • Organizer
      日本育種学会第118回講演会
    • Place of Presentation
      秋田県立大学(秋田県)
    • Year and Date
      2010-09-25
    • Related Report
      2010 Final Research Report
  • [Presentation] plastochron変異体のホルモン応答性と原因遺伝子の過剰発現2010

    • Author(s)
      三村真生・伊藤純一・長戸康郎
    • Organizer
      日本育種学会
    • Place of Presentation
      秋田県立大学
    • Year and Date
      2010-09-25
    • Related Report
      2010 Annual Research Report
  • [Presentation] イネSLENDER LEAF1遺伝子の解析2010

    • Author(s)
      吉川貴徳・伊藤純一・長戸康郎
    • Organizer
      日本育種学会
    • Place of Presentation
      秋田県立大学
    • Year and Date
      2010-09-25
    • Related Report
      2010 Annual Research Report
  • [Presentation] イネの多様な発生突然変異と農業形質2010

    • Author(s)
      長戸康郎
    • Organizer
      第49回ガンマーフィールドシンポジウム
    • Place of Presentation
      水戸市
    • Year and Date
      2010-07-14
    • Related Report
      2010 Annual Research Report
  • [Presentation] イネの多様な発生突然変異と農業形質2010

    • Author(s)
      長戸康郎
    • Organizer
      第49回ガンマーフィールドシンポジウム
    • Place of Presentation
      水戸市(茨城県)
    • Year and Date
      2010-07-14
    • Related Report
      2009 Annual Research Report
  • [Presentation] イネ細葉変異体slender leafの解析2010

    • Author(s)
      吉川貴徳・小野絵里・伊藤淳一・長戸康郎
    • Organizer
      日本育種学会第117回講演会
    • Place of Presentation
      京都大学(京都府)
    • Year and Date
      2010-03-27
    • Related Report
      2010 Final Research Report
  • [Presentation] NARUTOMAKI gene affects the leaf rolling and viability in rice.2010

    • Author(s)
      Yew C., J.-I.Itoh, Y.Nagato
    • Organizer
      117th Annual Meeting of Japanese Society of Breeding
    • Place of Presentation
      京都大学(京都府)
    • Year and Date
      2010-03-27
    • Related Report
      2010 Final Research Report
  • [Presentation] イネのメバロン酸経路の遺伝子SEGMENTED EMBRYOは胚の分割を抑制する2010

    • Author(s)
      高階泰宗・伊藤純一・長戸康郎
    • Organizer
      日本育種学会第117回講演会
    • Place of Presentation
      京都大学(京都府)
    • Year and Date
      2010-03-26
    • Related Report
      2010 Final Research Report
  • [Presentation] イネのjaponica-indicaにおけるjuvenile-adult相転換時期の分化2010

    • Author(s)
      荒川理恵、吉川貴徳、伊藤純一・長戸康郎
    • Organizer
      日本育種学会第117回講演会
    • Place of Presentation
      京都大学(京都府)
    • Year and Date
      2010-03-26
    • Related Report
      2010 Final Research Report
  • [Presentation] 栄養成長初期に主桿が枯死するイネのmain culm lethal変異体の解析2010

    • Author(s)
      藤井宏樹、伊藤純一、長戸康郎
    • Organizer
      日本育種学会第117回講演会
    • Place of Presentation
      京都大学(京都府)
    • Year and Date
      2010-03-26
    • Related Report
      2010 Final Research Report
  • [Presentation] Identification and characterization of rice ABERRANT PANICLE ORGANIZATION 2 gene.2010

    • Author(s)
      Ikeda-Kawakatsu K. Sato H., Izawa T., Maekawa M., Nagato Y
    • Organizer
      第51回日本植物生理学会年会
    • Place of Presentation
      熊本大学(熊本県)
    • Year and Date
      2010-03-18
    • Related Report
      2010 Final Research Report
  • [Presentation] 葉序を規定するイネDEC遺伝子の単離2009

    • Author(s)
      伊藤純一、榊原均、長戸康郎
    • Organizer
      日本育種学会第116回講演会
    • Place of Presentation
      北海道大学(北海道)
    • Year and Date
      2009-09-25
    • Related Report
      2010 Final Research Report
  • [Presentation] イネの初期生育に異常を示すasy変異体の解析2009

    • Author(s)
      細木渉、伊藤純一、長戸康郎
    • Organizer
      日本育種学会第116回講演会
    • Place of Presentation
      北海道大学(北海道)
    • Year and Date
      2009-09-25
    • Related Report
      2010 Final Research Report
  • [Presentation] plastochron変異体のホルモン応答性と原因遺伝子の過剰発現2009

    • Author(s)
      三村真生・伊藤純一・長戸康郎
    • Organizer
      日本育種学会
    • Place of Presentation
      秋田県立大学(秋田県)
    • Year and Date
      2009-09-25
    • Related Report
      2009 Annual Research Report
  • [Presentation] イネSLENDER LEAF1遺伝子の解析2009

    • Author(s)
      吉川貴徳・伊藤純一・長戸康郎
    • Organizer
      日本育種学会
    • Place of Presentation
      秋田県立大学(秋田県)
    • Year and Date
      2009-09-25
    • Related Report
      2009 Annual Research Report
  • [Presentation] イネの胚の器官分化パターンを維持できないmsp1変異体の解析2009

    • Author(s)
      田附博、伊藤純一、草場信、北野英己、長戸康郎
    • Organizer
      日本育種学会第115回講演会
    • Place of Presentation
      エポカルつくば(茨城県)
    • Year and Date
      2009-03-28
    • Related Report
      2010 Final Research Report
  • [Presentation] イネのPETER PAN SYNDROME遺伝子はjuvenile-adult相転換と光形態形成を制御する2009

    • Author(s)
      田中伸裕、伊藤純一、千徳直樹、長戸康郎
    • Organizer
      日本育種学会第115回講演会
    • Place of Presentation
      エポカルつくば(茨城県)
    • Year and Date
      2009-03-28
    • Related Report
      2010 Final Research Report
  • [Presentation] イネspw1-cls変異体の閉花受粉性に対する温度の影響2009

    • Author(s)
      大森伸之介、佐藤光、長戸康郎、吉田均
    • Organizer
      日本育種学会第115回講演会
    • Place of Presentation
      エポカルつくば(茨城県)
    • Year and Date
      2009-03-28
    • Related Report
      2010 Final Research Report
  • [Presentation] イネの胚の器官分化パターンを維持できないmsp1変異体の解析2009

    • Author(s)
      田附博
    • Organizer
      日本育種学会第115回講演会
    • Place of Presentation
      つくば
    • Year and Date
      2009-03-28
    • Related Report
      2008 Annual Research Report
  • [Presentation] イネのPETER PAN SYNDROME遺伝子は juvenile-adult 相転換と光形態形成を制御するす2009

    • Author(s)
      田中伸裕
    • Organizer
      日本育種学会第115回講演会
    • Place of Presentation
      つくば
    • Year and Date
      2009-03-28
    • Related Report
      2008 Annual Research Report
  • [Presentation] イネADAXIALIZED LEAF遺伝子は葉や胚のパターン形成に作用する2008

    • Author(s)
      桧原健一郎、小原真理、林田恵美、阿部匡、伊藤純一、長戸康郎
    • Organizer
      第31回日本分子生物学会年会・第81回日本生化学会大会 合同大会
    • Place of Presentation
      神戸ポートアイランド(兵庫県)
    • Year and Date
      2008-12-11
    • Related Report
      2010 Final Research Report
  • [Presentation] イネ胚パターン形成変異体are2の同定と解析2008

    • Author(s)
      田附博、伊藤百代、伊藤純一、長戸康郎
    • Organizer
      日本育種学会第114回講演会
    • Place of Presentation
      滋賀県立大学(滋賀県)
    • Year and Date
      2008-10-11
    • Related Report
      2010 Final Research Report
  • [Presentation] 細胞間接着を負に制御するLEAF ADHESION遺伝子の解析2008

    • Author(s)
      松井三可子、佐藤亜依、伊藤純一、長戸康郎
    • Organizer
      日本育種学会第114回講演会
    • Place of Presentation
      滋賀県立大学(滋賀県)
    • Year and Date
      2008-10-11
    • Related Report
      2010 Final Research Report
  • [Presentation] イネ胚パターン形成変異体are2の同定と解析2008

    • Author(s)
      田附博
    • Organizer
      日本育種学会第114回講演会
    • Place of Presentation
      彦根
    • Year and Date
      2008-10-11
    • Related Report
      2008 Annual Research Report
  • [Presentation] 細胞間接着を負に制御するLEAF ADHESION遺伝子の解析2008

    • Author(s)
      松井三可子
    • Organizer
      日本育種学会第114回講演会
    • Place of Presentation
      彦根
    • Year and Date
      2008-10-11
    • Related Report
      2008 Annual Research Report
  • [Presentation] イネADAXIALIZED LEAF遺伝子は葉や胚のパターン形成に作用する2008

    • Author(s)
      桧原健一郎
    • Organizer
      第31回日本分子生物学会年会・第81回日本生化学会大会 合同大会
    • Place of Presentation
      神戸
    • Related Report
      2008 Annual Research Report

URL: 

Published: 2008-04-01   Modified: 2016-04-21  

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