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Functional analysis of modular enzymes and its application to the synthesis of antitumor agents

Research Project

Project/Area Number 20310126
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Living organism molecular science
Research InstitutionHokkaido University

Principal Investigator

OIKAWA Hideaki  Hokkaido University, 大学院・理学研究院, 教授 (00185175)

Project Period (FY) 2008 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥19,240,000 (Direct Cost: ¥14,800,000、Indirect Cost: ¥4,440,000)
Fiscal Year 2010: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2009: ¥6,240,000 (Direct Cost: ¥4,800,000、Indirect Cost: ¥1,440,000)
Fiscal Year 2008: ¥11,180,000 (Direct Cost: ¥8,600,000、Indirect Cost: ¥2,580,000)
Keywords生理活性 / 酵素反応 / 微生物 / 生合成 / 有機化学
Research Abstract

Non-ribosomal peptide synthetase (NRPS) promotes condensations of amino acids forming amide linkages, with some modifications. We found that a single NRPS SfmC of the potent antitumor agents saframycin catalyzes a seven-step transformation from readily synthesized dipeptidyl substrates with long acyl chains into a pentacyclic tetrahydroisoquinoline scaffold. Based on deletion mutant analyses, we proposed the detailed mechanism involving the reductions of various peptidyl thioesters by an identical R-domain followed by the C-domain-mediated Pictet-Spengler reactions in an iterative manner.

Report

(4 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • 2008 Annual Research Report
  • Research Products

    (51 results)

All 2011 2010 2009 2008

All Journal Article (30 results) (of which Peer Reviewed: 29 results) Presentation (13 results) Book (8 results)

  • [Journal Article] Involvement of Common Intermediate 3-Hydroxy-L-Kynurenine in Chromophore Biosynthesis of Quinomycin Family Antibiotics.2011

    • Author(s)
      Y.Hirose, K.Watanabe, A.Minami, T.Nakamura, H.Oguri, H.Oikawa
    • Journal Title

      J.Antibiot Vol.64, No.1

      Pages: 117-122

    • NAID

      10030637815

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Involvement of Common Intermediate 3-Hydroxy-L-Kynurenine in Chromophore Biosynthesis of Quinomycin Family Antibiotics.2011

    • Author(s)
      Y.Hirose, K.Watanabe, A.Minami, T.Nakamura, H.Oguri, H.Oikawa
    • Journal Title

      J.Antibiot

      Volume: Vol.64, No.1 Pages: 117-122

    • NAID

      10030637815

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Reconstruction of the Saframycin Core Scaffold Defines Dual Pictet-Spengler Mechanisms2010

    • Author(s)
      K.Koketsu, K.Watanabe, H.Suda, H.Oguri, H. Oikawa
    • Journal Title

      Nat.Chem.Biol Vol.6, No.6

      Pages: 408-410

    • NAID

      120002646838

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Solanapyrone Synthase, a Possible Diels-Alderase, and Iterative Type I Polyketide Synthase Encoded in a Biosynthetic Gene Cluster from Alternaria Solani.2010

    • Author(s)
      K.Kasahara, T.Miyamoto, T.Fujimoto, H.Oguri, T.Tokiwano, H.Oikawa, Y.Ebizuka, I.Fujii
    • Journal Title

      ChemBioChem Vol.11, No.9

      Pages: 1245-1252

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Reconstruction of the saframycin core scaffold defines dual Pictet-Spengler mechanisms.2010

    • Author(s)
      Koketsu H., Watanabe K., Suda H., Oguri H., Oikawa H.
    • Journal Title

      Nat.Chem.Biol. Vol.6

      Pages: 408-410

    • NAID

      120002646838

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Reconstruction of the Saframycin Core Scaffold Defines Dual Pictet-Spengler Mechanisms.2010

    • Author(s)
      K.Koketsu, K.Watanabe, H.Suda, H.Oguri, H.Oikawa
    • Journal Title

      Nat.Chem.Blot

      Volume: Vol.6, No.6 Pages: 408-410

    • NAID

      120002646838

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Solanapyrone Synthase, a Possible Diels-Alderase, and Iterative Type 1 Polyketide Synthase Encoded in a Biosynthetic Gene Cluster from Alternaria Solani.2010

    • Author(s)
      K.Kasahara, T.Miyamoto, T.Fujimoto, H.Oguri, T.Tokiwano, H.Oikawa, Y.Ebizuka, I.Fujii
    • Journal Title

      ChemBioChem

      Volume: vol.11, No.9 Pages: 1245-1252

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Reconstruction of the saframycin core scaffold defines dual Pictet-Spengler mechanisms.2010

    • Author(s)
      Koketsu, H., Watanabe, K., Suda, H., Oguri, H., Oikawa, H
    • Journal Title

      Nat.Chem.Biol. (印刷中)

    • NAID

      120002646838

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Diversification of echinomycin molecular structure by way of chemoenzymatic synthesis and heterologous expression of the engineered echinomycin biosynthetic pathway2009

    • Author(s)
      Watanabe K., Oguri H., Oikawa H.
    • Journal Title

      Curr.Opin.Chem.Biol. Vol.13

      Pages: 189-196

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Rationally Engineered Total Biosynthesis of a Synthetic Analogue of a Natural Quinomycin Depsipeptide in Escherichia coli.2009

    • Author(s)
      Watanabe K., (5 persons), Oikawa H.
    • Journal Title

      ChemBioChem Vol.10

      Pages: 1965-1968

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Escherichia coli Allows Efficient Modular Incorporation of Newly Isolated Quinomycin Biosynthetic Enzyme into Echinomycin Biosynthetic Pathway for Rational Design and Synthesis of Potent Antibiotic Unnatural Natural Product2009

    • Author(s)
      Watanabe K., (8 persons), Oikawa, H.
    • Journal Title

      J.Am.Chem.Soc. Vol.131

      Pages: 9347-9353

    • Related Report
      2010 Final Research Report
  • [Journal Article] Enzymatic synthesis of molecular skeletons of complex antitumor antibiotics with non-ribosomal peptide synthetases2009

    • Author(s)
      Watanabe K., Oguri H., Oikawa H.
    • Journal Title

      J.Synth.Org.Chem.Jpn. Vol.67

      Pages: 1152-1160

    • NAID

      10026866717

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Identification of a gene cluster of polyether antibiotic lasalocid from Streptomyces lasaliensis2009

    • Author(s)
      A.Migita, M.Watanabe, Y.Hirose, K.Watanabe, T.Tokiwano, H.Kinashi, H.Oikawa
    • Journal Title

      Biosci.Biotechnol.Biochem Vol.73, No.1

      Pages: 169-176

    • NAID

      10027536367

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Diversification of echinomycin molecular structure by way of chemoenzymatic synthesis and heterologous expression of the engineered echinomycin biosynthetic pathway2009

    • Author(s)
      Watanabe K., Oguri H., Oikawa H.
    • Journal Title

      Curr.Opinion Chem.Biol. Vol.13, No.1

      Pages: 189-196

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Biosynthetic gene-based secondary metabolite screening : a new diterpene, methyl phomopsenonate, from the fungus Phomopsis am ygdali2009

    • Author(s)
      Toyomasu T., Kaneko A, Tokiwano T., Kanno Y., Kanno Y., Nuda R., Miura S., Nishioka T., Ikeda C., Mitsuhashi, W., Dairi T., Kawano T., Oikawa H., Kato N., Sassa T.
    • Journal Title

      J.Org.Chem. Vol.74, No.1

      Pages: 1541-1548

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Diversification of echinomycin molecular structure by way of chemoenzymatic synthesis and heterologous expression of the engineered echinomycin biosynthetic pathway2009

    • Author(s)
      Watanabe, K., Oguri, H., ^*Oikawa, H.
    • Journal Title

      Curr.Opin.Chem.Biol. 13

      Pages: 189-196

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Rationally Engineered Total Biosynthesis of a Synthetic Analogue of a Natural Quinomycin Depsipeptide in Escherichia coli.2009

    • Author(s)
      Watanabe, K., (5 persons), Oikawa, H.
    • Journal Title

      Chem Bio Chem 10

      Pages: 1965-1968

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Escherichia coli Allows Efficient Modular Incorporation of Newly Isolated Quinomycin Biosynthetic Enzyme into Echinomycin Biosynthetic Pathway for Rational Design and Synthesis of Potent Antibiotic Unnatural Natural Product2009

    • Author(s)
      Watanabe, K., (8 persons), Oikawa, H.
    • Journal Title

      J.Am.Chem.Soc. 131

      Pages: 9347-9353

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Enzymatic synthesis of molecular skeletons of complex antitumor antibiotics with non-ribosomal peptide synthetases2009

    • Author(s)
      Watanabe, K., Oguri, H., Oikawa, H.
    • Journal Title

      J.Synth.Org.Chem., Jpn. 67

      Pages: 1152-1160

    • NAID

      10026866717

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Identification of a gene cluster of polyether antibiotic lasalocid from Streptomyces lasaliensis2009

    • Author(s)
      Oikawa, H, et.al.
    • Journal Title

      Biosci. Biotechnol. Biochem 73

      Pages: 169-176

    • NAID

      10027536367

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Diversification of echinomycin molecular structure by way of chemoenzymatic synthesis and heterologous expression of the engineered echinomycin biosynthetic pathway2009

    • Author(s)
      Oikawa, H, et.al.
    • Journal Title

      Curr. Opinion Chem. Biol. 13(In press)

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Biosynthetic gene-based secondary metabolite screening: a new diterpene, methyl phomopsenonate, from the fungus Phomopsis am ygdali2009

    • Author(s)
      Oikawa, H, et.al.
    • Journal Title

      J. Org. Chem. 74

      Pages: 1541-1548

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Improved production of triostin A in engineered Escherichia coli with furnished quinoxaline chromophore by design of experiments in small-scale culture2008

    • Author(s)
      A.P.Praseuth, M.B.Praseuth, H.Oguri, H.Oikawa, K.Watanabe, C.C.C.Wang
    • Journal Title

      Biotechnology Progress Vol.24, No.1

      Pages: 134-139

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Enzymatic macrolactonization in the presence of DNA leading to triostin A analogs2008

    • Author(s)
      K.Koketsu, H.Oguri, K.Watanabe, Oikawa H.
    • Journal Title

      Chem.Biol. Vol.15, No.1

      Pages: 818-828

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Epoxide hydrolase Lsd19 for polyether formation in the biosynthesis of Lasalocid A : Direct experimental evidence on polyene-polyepoxide hypothesis in polyether biosynthesis2008

    • Author(s)
      Y.Shichijo, A.Migita, H.Oguri, M.Watanabe, T.Tokiwano, K.Watanabe, H.Oikawa
    • Journal Title

      J.Am.Chem.Soc. Vol.130, No.1

      Pages: 12230-12231

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Unprecedented biological cyclopropanation in the biosynthesis of FR-9008482008

    • Author(s)
      T.Tokiwano, H.Watanabe, T.Seo, H.Oikawa
    • Journal Title

      Chem.Commun. No.1

      Pages: 6016-6018

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Improved production of triostin A in engineered Escherichia coli with furnished quinoxaline chromophore by design of experiments in small-scale culture2008

    • Author(s)
      Oikawa, H, et.al.
    • Journal Title

      Biotechnology Progress 24

      Pages: 134-139

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Enzymatic macrolactonization in the presence of DNA leading to triostin A analogs2008

    • Author(s)
      Oikawa, H, et.al.
    • Journal Title

      Chem. Biol. 15

      Pages: 818-828

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Epoxide hydrolase Lsd19 for polyether formation in the biosynthesis of Lasalocid A: Direct experimental evidence on polyene?polyepoxide hypothesis in polyether biosynthesis2008

    • Author(s)
      Oikawa, H, et.al.
    • Journal Title

      J. Am. Chem. Soc. 130

      Pages: 12230-12231

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Unprecedented biological cyclopropanation in the biosynthesis of FR-9008482008

    • Author(s)
      Oikawa, H, et.al.
    • Journal Title

      Chem. Commun.

      Pages: 6016-6018

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Presentation] 生物活性物質の骨格合成酵素を利用した誘導体合成を目指して2010

    • Author(s)
      s
    • Organizer
      東京大学生物生産工学研究センターシンポジウム「微生物代謝研究におけるケミカルバイオロジーの最前線」
    • Place of Presentation
      東京大学
    • Year and Date
      2010-12-08
    • Related Report
      2010 Final Research Report
  • [Presentation] 生物活性物質の骨格合成酵素を利用した誘導体合成を目指して2010

    • Author(s)
      及川英秋
    • Organizer
      東京大学生物生産工学研究センターシンポジウム「微生物代謝研究におけるケミカルバイオロジーの最前線」
    • Place of Presentation
      東京大学 招待講演
    • Year and Date
      2010-12-08
    • Related Report
      2010 Annual Research Report
  • [Presentation] 天然物生合成は、普遍的有用物質生産法となり得るか?2010

    • Author(s)
      及川英秋
    • Organizer
      化学トピックス特別講義
    • Place of Presentation
      東京工業大学
    • Year and Date
      2010-11-17
    • Related Report
      2010 Final Research Report
  • [Presentation] 天然物生合成は、普遍的有用物質生産法となり得るか2010

    • Author(s)
      及川英秋
    • Organizer
      化学科セミナー
    • Place of Presentation
      東京工業大学 招待講演
    • Year and Date
      2010-11-17
    • Related Report
      2010 Annual Research Report
  • [Presentation] 抗腫瘍抗生物質サフラマイシンの生合成酵素を用いた骨格合成2010

    • Author(s)
      及川英秋
    • Organizer
      第52回天然有機化合物討論会
    • Place of Presentation
      静岡
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] 生合成にDiels-Alder 反応は関与するのか?2010

    • Author(s)
      及川英秋
    • Organizer
      始まり-苦闘-結末、薮田セミナー:市原メモリアルシンポジウム
    • Place of Presentation
      北海道大学
    • Related Report
      2010 Final Research Report
  • [Presentation] 生合成にDiels-Alder反応は関与するのか?始まり-苦闘-結末2010

    • Author(s)
      及川英秋
    • Organizer
      薮田セミナー:市原メモリアルシンポジウム
    • Place of Presentation
      北海道大学 招待講演
    • Related Report
      2010 Annual Research Report
  • [Presentation] Biosynthetic Engineering on Antitumor Peptide Antibiotics2009

    • Author(s)
      Oikawa H.
    • Organizer
      14th European Congress on Biotechnology
    • Place of Presentation
      Barcelona, Spain
    • Year and Date
      2009-09-13
    • Related Report
      2010 Final Research Report
  • [Presentation] Biosynthetic Engineering on Antitumor Peptide Antibiotics2009

    • Author(s)
      Oikawa, H
    • Organizer
      14^<th> European Congress on Biotechnology
    • Place of Presentation
      Barcelona, Spain
    • Year and Date
      2009-09-13
    • Related Report
      2009 Annual Research Report
  • [Presentation] 抗腫瘍抗生物質サフラマイシン生合成酵素を用いたテトラヒドロイソキノリン骨格の酵素合成2009

    • Author(s)
      纐纈健人
    • Organizer
      第95回有機合成シンポジウム
    • Place of Presentation
      東京
    • Year and Date
      2009-06-11
    • Related Report
      2010 Final Research Report
  • [Presentation] 抗腫瘍抗生物質サフラマイシン生合成酵素を用いたテトラヒドロイソキノリン骨格の酵素合成2009

    • Author(s)
      纐纈健人
    • Organizer
      第95回 有機合成シンポジウム
    • Place of Presentation
      東京
    • Year and Date
      2009-06-11
    • Related Report
      2009 Annual Research Report
  • [Presentation] テトラヒドロイソキノリン系抗生物質SF-1739HP生合成経路の解明2009

    • Author(s)
      纐纈健人、渡辺賢二、大栗博毅、及川英秋
    • Organizer
      日本農芸化学会2009年度大会
    • Place of Presentation
      福岡
    • Year and Date
      2009-03-28
    • Related Report
      2010 Final Research Report 2008 Annual Research Report
  • [Presentation] 非リボソーム依存性ペプチド合成酵素を用いた抗腫瘍性物質ライブラリー構築の試み2009

    • Author(s)
      及川英秋
    • Organizer
      日本化学会第89春季年会大会シンポジウム、第二次先端ウォッチングイブニングセッション「生合成工学一酵素を駆使した生物活性天然物の創製を目指して」
    • Place of Presentation
      船橋
    • Year and Date
      2009-03-27
    • Related Report
      2010 Final Research Report 2008 Annual Research Report
  • [Book] in Comprehensive Natural Products Chemistry II(Chemical Difence and Toxins of Plant)2010

    • Author(s)
      Yamane H., Konno K., Takabayashi J., Sassa T., Oikawa H., Elsevier
    • Total Pages
      47
    • Related Report
      2010 Final Research Report
  • [Book] in Comprehensive Natural Products Chemistry II(Chemical Defense and Toxins of Plant)2010

    • Author(s)
      Yamane H., Konno K., Takabayashi J., Sassa T., Oikawa H., Elsevier
    • Total Pages
      46
    • Related Report
      2010 Final Research Report
  • [Book] Comprehensive Natural Products Chemistry II(Diels-Alderases)2010

    • Author(s)
      Oikawa H.
    • Total Pages
      39
    • Related Report
      2010 Final Research Report
  • [Book] Chemical Difence and Toxins of Plant. in Comprehensive Natural Products Chemistry II2010

    • Author(s)
      Yamane, H., Konno, K., Takabayashi, J., Sassa, T., Oikawa, H.
    • Total Pages
      47
    • Publisher
      Elsevier
    • Related Report
      2010 Annual Research Report
  • [Book] "Chemical Defense and Toxins of Plant."in Comprehensive Natural Products Chemistry II2010

    • Author(s)
      Yamane, H., Konno, K., Takabayashi, J., Sassa, T., Oikawa, H
    • Total Pages
      46
    • Publisher
      Elsevier
    • Related Report
      2009 Annual Research Report
  • [Book] Diels-Alderases."in Comprehensive Natural Products Chemistry II2010

    • Author(s)
      Oikawa, H
    • Total Pages
      39
    • Publisher
      Elsevier
    • Related Report
      2009 Annual Research Report
  • [Book] 天然物全合成の最新動向(生合成酵素による天然物の全合成抗腫瘍性物質エキノマイシンの合成を中心に)2009

    • Author(s)
      渡辺賢二、大栗博毅、及川英秋
    • Total Pages
      16
    • Publisher
      シーエムシー出版
    • Related Report
      2010 Final Research Report
  • [Book] 天然物全合成の最新動向『生合成酵素による天然物の全合成 抗腫瘍性物質エキノマイシンの合成を中心に』2009

    • Author(s)
      渡辺賢二、大栗博毅、及川英秋
    • Total Pages
      16
    • Publisher
      シーエムシー出版
    • Related Report
      2009 Annual Research Report

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Published: 2008-04-01   Modified: 2016-04-21  

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