• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Molecular mechanism of the construction of the bacterial flagellar rod.

Research Project

Project/Area Number 20370036
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Structural biochemistry
Research InstitutionOsaka University

Principal Investigator

IMADA Katsumi  Osaka University, 大学院・理学研究科, 教授 (40346143)

Co-Investigator(Renkei-kenkyūsha) MINAMINO Tohru  大阪大学, 大学院・生命機能研究科, 准教授 (20402993)
KATO Takayuki  大阪大学, 大学院・生命機能研究科, 助教 (20423155)
NAMBA Keiichi  大阪大学, 大学院・生命機能研究科, 教授 (30346142)
Project Period (FY) 2008 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥19,370,000 (Direct Cost: ¥14,900,000、Indirect Cost: ¥4,470,000)
Fiscal Year 2010: ¥6,370,000 (Direct Cost: ¥4,900,000、Indirect Cost: ¥1,470,000)
Fiscal Year 2009: ¥6,240,000 (Direct Cost: ¥4,800,000、Indirect Cost: ¥1,440,000)
Fiscal Year 2008: ¥6,760,000 (Direct Cost: ¥5,200,000、Indirect Cost: ¥1,560,000)
KeywordsX線結晶解析 / 分子機械 / ナノマシン / 生物物理 / 蛋白質 / 生体分子
Research Abstract

In this study, we determined the crystal structure of a C-terminal fragment of FlgJ, which has a muramidase activity, and revealed the molecular mechanism of the peptidoglican hydrolysis. The active site structure and the overall folding of FlgJ resemble those of hen egg white lysozyme. Interestingly, the activity of FlgJ is strongly inhibited by a very small amount of cation. We reconstituted distal rod by adding rod proteins to the purified flagellar hook. Moreover, we elucidated the interaction between the rod and FlgD, the hook cap protein.

Report

(4 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • 2008 Annual Research Report
  • Research Products

    (43 results)

All 2011 2010 2009 2008 Other

All Journal Article (6 results) (of which Peer Reviewed: 6 results) Presentation (32 results) Book (1 results) Remarks (4 results)

  • [Journal Article] Genetic analysis of the bacterial hook-capping protein FlgD responsible for hook assembly.2011

    • Author(s)
      Moriya N, Minamino T, Imada K, Namba K.
    • Journal Title

      Microbiology. 157

      Pages: 1354-1362

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Genetic analysis of the bacterial hook-capping protein FlgD responsible for hook assembly.2011

    • Author(s)
      Moriya N., Imada K., et al.
    • Journal Title

      Microbiology

      Volume: (in press 未定)

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Role of the C-terminal cytoplasmic domain of FlhA in bacterial flagellar type III protein export.2010

    • Author(s)
      Minamino T, Shimada M, Okabe M, Saijo-Hamano Y, Imada K, Kihara M, Namba K.
    • Journal Title

      J.Bacteriol. 192

      Pages: 1929-1936

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Crystallization and preliminary X-ray analysis of a C-terminal fragment of FlgJ, a putative flagellar rod cap protein of Salmonella.2009

    • Author(s)
      Kikuchi Y, Matsunami H, Yamane M, Imada K, Namba K.
    • Journal Title

      Acta Crystallogr. F65

      Pages: 17-20

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] べん毛を使って感染する病原性大腸菌2009

    • Author(s)
      今田勝巳
    • Journal Title

      蛋白質・核酸・酵素 Vol. 54, No. 6

      Pages: 765-765

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Crystallization and preliminary X-ray analysis of a C-terminal fragment of FlgJ, a putative flagellar rod cap protein of Salmonella.2009

    • Author(s)
      Kikuchi, Y.
    • Journal Title

      Acta Crystallogr. F65

      Pages: 17-20

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Presentation] F1 N ドメインとFliI N ドメイン, そして2010

    • Author(s)
      今田勝巳
    • Organizer
      第二回膜輸送体研究会
    • Place of Presentation
      ホテルピアノ(北海道)
    • Year and Date
      2010-12-21
    • Related Report
      2010 Final Research Report
  • [Presentation] F_1 NドメインとFliI Nドメイン、そして2010

    • Author(s)
      今田勝巳
    • Organizer
      第二回膜輸送体研究会
    • Place of Presentation
      ホテルピアノ(北海道)
    • Year and Date
      2010-12-21
    • Related Report
      2010 Annual Research Report
  • [Presentation] 細菌べん毛ロッドキャップ蛋白質FlgJによるペプチドグリカン加水分解の分子機構2010

    • Author(s)
      菊地祐希、松波秀行、難波啓一、今田勝巳
    • Organizer
      第10回日本蛋白質科学会年会
    • Place of Presentation
      札幌コンベンションセンター(北海道)
    • Year and Date
      2010-06-18
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] Tcp の構造とcitrate 認識2010

    • Author(s)
      今田勝巳
    • Organizer
      第7回21世紀大腸菌研究会サテライトミーティング
    • Place of Presentation
      休暇村南阿蘇(熊本県)
    • Year and Date
      2010-06-04
    • Related Report
      2010 Final Research Report
  • [Presentation] Tcpの構造とcitrate認識2010

    • Author(s)
      今田勝巳
    • Organizer
      第7回21世紀大腸菌研究会サテライトミーティング
    • Place of Presentation
      休暇村南阿蘇(熊本)
    • Year and Date
      2010-06-04
    • Related Report
      2010 Annual Research Report
  • [Presentation] 細菌べん毛ロッドキャップ蛋白質FlgJ のペプチドグリカン加水分 解機構に対する構造学的知見2010

    • Author(s)
      菊地祐希、松波秀行、山根みどり、今田勝巳、難波啓一
    • Organizer
      2009年度べん毛研究交流会
    • Place of Presentation
      松風園(愛知県)
    • Year and Date
      2010-03-14
    • Related Report
      2010 Final Research Report
  • [Presentation] 細菌べん毛MS リングの機能ドメイン構造の解析2010

    • Author(s)
      吉田真司、松波秀行、長島重広、今田勝巳、難波啓一
    • Organizer
      2009年度べん毛研究交流会
    • Place of Presentation
      松風園(愛知県)
    • Year and Date
      2010-03-14
    • Related Report
      2010 Final Research Report
  • [Presentation] 細菌べん毛MSリングの機能ドメイン構造の解析. Functional domain structure of the bacterial flagellar MS-ring.2010

    • Author(s)
      吉田真司
    • Organizer
      2009年度べん毛研究交流会
    • Place of Presentation
      三谷温泉松風園
    • Year and Date
      2010-03-14
    • Related Report
      2009 Annual Research Report
  • [Presentation] Molecular mechanism of peptidoglycan hydrolysis by FlgJ, a putative flagellar rod cap protein of Salmonella.2010

    • Author(s)
      菊地祐希, 松波秀行, 山根みどり, 今田勝巳, 難波啓一
    • Organizer
      Biophysical Society 54^<th> Annual Meeting
    • Place of Presentation
      Moscone Center, San Francisco, U.S.A.
    • Year and Date
      2010-02-22
    • Related Report
      2010 Final Research Report
  • [Presentation] Molecular mechanism of peptidoglycan hydrolysis by FlgJ, a putative flacellar rod can protein of Salmonella.2010

    • Author(s)
      Kikuchi, Y., etal
    • Organizer
      Biophysical Society 54^<th> Annual Meeting
    • Place of Presentation
      Moscone Center,, USA
    • Year and Date
      2010-02-22
    • Related Report
      2009 Annual Research Report
  • [Presentation] Structure of a biological macromolecular nanomachine, the bacterial flagellum.2009

    • Author(s)
      今田勝巳
    • Organizer
      Osaka University Macromolecular Symposium '
    • Place of Presentation
      Osaka University, Japan
    • Year and Date
      2009-12-12
    • Related Report
      2010 Final Research Report
  • [Presentation] Structure of a biological macromolecular nanomachine, the bacterial flagellum.2009

    • Author(s)
      Imada, K.
    • Organizer
      Osaka University Macromolecular Symposium '09
    • Place of Presentation
      Osaka University
    • Year and Date
      2009-12-12
    • Related Report
      2009 Annual Research Report
  • [Presentation] サルモネラ菌べん毛ロッドキャップタンパク質FlgJ の結晶構造と変異体解析2009

    • Author(s)
      菊地祐希、松波秀行、山根みどり、今田勝巳、難波啓一
    • Organizer
      特定領域研究「生体超分子の構造形成と機能制御の原子機構」第6回公開シンポジウム
    • Place of Presentation
      千里ライフサイエンスセンター(大阪府)
    • Year and Date
      2009-12-02
    • Related Report
      2010 Final Research Report
  • [Presentation] サルモネラ菌べん毛MS リング構成タンパク質FliF のプリプラズム領域の発現系構築と精製2009

    • Author(s)
      吉田真司、松波秀行、長島重広、今田勝巳、難波啓一
    • Organizer
      特定領域研究「生体超分子の構造形成と機能制御の原子機構」第6回公開シンポジウム
    • Place of Presentation
      千里ライフサイエンスセンター(大阪府)
    • Year and Date
      2009-12-02
    • Related Report
      2010 Final Research Report
  • [Presentation] サルモネラ菌べん毛ロッドキャップタンパク質FlgJの結晶構造と変異体解析.2009

    • Author(s)
      菊地祐希, etal
    • Organizer
      特定領域研究「生体超分子の構造形成と機能制御の原子機構」第6回公開シンポジウム
    • Place of Presentation
      千里ライフサイエンスセンター
    • Year and Date
      2009-12-02
    • Related Report
      2009 Annual Research Report
  • [Presentation] サルモネラ菌べん毛MSリング構成タンパク質FliFのプリプラズム領域の発現系構築と精製.2009

    • Author(s)
      吉田真司, etal
    • Organizer
      特定領域研究「生体超分子の構造形成と機能制御の原子機構」第6回公開シンポジウム
    • Place of Presentation
      千里ライフサイエンスセンター
    • Year and Date
      2009-12-02
    • Related Report
      2009 Annual Research Report
  • [Presentation] Structure of the bacterial flagellum and the mechanism of its self-assembly. 4th Conference on Artificial Muscles -5th World Congress on Biomimetics2009

    • Author(s)
      今田勝巳
    • Organizer
      Artificial Muscles and Nano-Bio-
    • Place of Presentation
      Senri Life Science Center, Osaka, Japan
    • Year and Date
      2009-11-26
    • Related Report
      2010 Final Research Report
  • [Presentation] Structure of the bacterial flagellum and the mechanism of its self-assembly.2009

    • Author(s)
      Imada, K.
    • Organizer
      4th Conference on Artificial Muscles -5th World Congress on Biomimetics, Artificial Muscles and Nano-Bio-
    • Place of Presentation
      Senri Life Science Center
    • Year and Date
      2009-11-26
    • Related Report
      2009 Annual Research Report
  • [Presentation] 細菌べん毛ロッドの再構成2009

    • Author(s)
      堀田春香、藤井高志、西條由見子、難波啓一、今田勝巳
    • Organizer
      日本生物物理学会第47回年会
    • Place of Presentation
      アスティとくしま/徳島文理大学
    • Year and Date
      2009-11-01
    • Related Report
      2010 Final Research Report
  • [Presentation] 細菌べん毛ロッドの再構成. In vitro reconstitution of the bacterial flagellar rod.2009

    • Author(s)
      Hotta, H., etal
    • Organizer
      日本生物物理学会第47回年会
    • Place of Presentation
      アスティとくしま/徳島文理大学
    • Year and Date
      2009-11-01
    • Related Report
      2009 Annual Research Report
  • [Presentation] サルモネラ菌べん毛ロッドキャップ蛋白質FlgJ の結晶構造と変異体解析2009

    • Author(s)
      菊地祐希、松波秀行、山根みどり、今田勝巳、難波啓一
    • Organizer
      日本生物物理学会第47回年会
    • Place of Presentation
      アスティとくしま/徳島文理大学
    • Year and Date
      2009-10-31
    • Related Report
      2010 Final Research Report
  • [Presentation] Structure-based mutational analyses of FlgJ, a putative flagellar rod capprotein from Salmonella.2009

    • Author(s)
      Kikuchi, Y., etal
    • Organizer
      日本生物物理学会第47回年会
    • Place of Presentation
      アスティとくしま/徳島文理大学
    • Year and Date
      2009-10-31
    • Related Report
      2009 Annual Research Report
  • [Presentation] Structure of the bacterial flagellum and the mechanism of its self-assembly.2009

    • Author(s)
      今田勝巳
    • Organizer
      Joint Conference of the Asian Crystallographic Association and Chinese Crystallography Society
    • Place of Presentation
      Jingyi Hotel, Beijing, China
    • Year and Date
      2009-10-23
    • Related Report
      2010 Final Research Report 2009 Annual Research Report
  • [Presentation] Structure of the bacterial flagellum and its evolutionary relation to other biological molecular machines. International Workshop on What is Evolutionl2009

    • Author(s)
      今田勝巳
    • Organizer
      Bicentennial of Charles Darwin's Birth
    • Place of Presentation
      Co-op Inn Kyoto Conference Hall, Kyoto, Japan
    • Year and Date
      2009-10-17
    • Related Report
      2010 Final Research Report
  • [Presentation] Structure of the bacterial flagellum and its evolutionary relation to other biological molecular machines.2009

    • Author(s)
      Imada, K.
    • Organizer
      International Workshop on What is Evolution? -Bicentennial of Charles Darwin's Birth
    • Place of Presentation
      Co-op Inn Kyoto Conference Hall
    • Year and Date
      2009-10-17
    • Related Report
      2009 Annual Research Report
  • [Presentation] 結晶構造と変異体解析から明らかになったサルモネラ菌べん毛ロッドキャップ蛋白質FlgJ のペプチドグリカン加水分解機構2008

    • Author(s)
      菊地祐希、松波秀行、山根みどり、今田勝巳、難波啓一
    • Organizer
      第46回日本生物物理学会年会
    • Place of Presentation
      福岡国際会議場
    • Year and Date
      2008-12-03
    • Related Report
      2010 Final Research Report
  • [Presentation] 結晶構造と変異体解析から明らかになったサルモネラ菌べん毛ロッドキャップ蛋白質FlgJのペプチドグリカン加水分解機構2008

    • Author(s)
      Kikuchi, Y.
    • Organizer
      第46回日本生物物理学会年会
    • Place of Presentation
      福岡国際会議場
    • Year and Date
      2008-12-03
    • Related Report
      2008 Annual Research Report
  • [Presentation] Structure of a biological macromolecular nanomachine, the bacterial flagellum.2008

    • Author(s)
      今田勝巳
    • Organizer
      Spring-8 Academic Review Committee (SPARC)
    • Place of Presentation
      SPring-8, Harima, Japan
    • Year and Date
      2008-11-17
    • Related Report
      2010 Final Research Report
  • [Presentation] Structure of a biological macromolecular nanomachine, the bacterial flagellum.2008

    • Author(s)
      Imada, K
    • Organizer
      Spring-8 Academic Review Committee(SPARC)
    • Place of Presentation
      SPring-8, Harima, Japan
    • Year and Date
      2008-11-17
    • Related Report
      2008 Annual Research Report
  • [Presentation] ロッドキャップ蛋白質FlgJのムラミダーゼドメインの構造2008

    • Author(s)
      菊地祐希、松波秀行、山根みどり、今田勝巳、難波啓一
    • Organizer
      第8回日本蛋白質科学会年会
    • Place of Presentation
      タワーホール船堀(東京都)
    • Year and Date
      2008-06-11
    • Related Report
      2010 Final Research Report
  • [Presentation] ロットキャップ蛋白質FlgJのムラミダーゼドメインの構造2008

    • Author(s)
      菊地祐希
    • Organizer
      第8回日本蛋白質科学会年会
    • Place of Presentation
      タワーホール船堀
    • Year and Date
      2008-06-11
    • Related Report
      2008 Annual Research Report
  • [Presentation] Crystal structure of the muramidase domain of FlgJ, a putative flagellar rod cap protein.2008

    • Author(s)
      Kikuchi Y, Matsunami H, Yamane M, Imada K, Namba K
    • Organizer
      XXI Congress of the International Union of Crystallography
    • Place of Presentation
      Grand Cube Osaka, Japan
    • Related Report
      2010 Final Research Report 2008 Annual Research Report
  • [Book] べん毛を使って感染する病原性大腸菌(Vol.54, No.6)(蛋白質・核酸・酵素)2009

    • Author(s)
      田勝巳
    • Total Pages
      765
    • Publisher
      共立出版
    • Related Report
      2010 Final Research Report
  • [Remarks]

    • URL

      http://www.chem.sci.osaka-u.ac.jp/lab/okuyama/

    • Related Report
      2010 Annual Research Report
  • [Remarks]

    • URL

      http://www.fbs.osaka-u.ac.jp/labo/09a.html

    • Related Report
      2010 Annual Research Report
  • [Remarks]

    • URL

      http://www.fbs.osaka-u.ac.jp/jp/labo/02/

    • Related Report
      2009 Annual Research Report
  • [Remarks]

    • URL

      http://www.fbs.osaka-u.ac.jp/labo/09a.html

    • Related Report
      2008 Annual Research Report

URL: 

Published: 2008-04-01   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi