Genome wide SNP collection for reclassification of high risk pathogens

• Project/Area Number: 20390124
• Research Category: Grant-in-Aid for Scientific Research (B)
• Allocation Type: Single-year Grants
• Section: 一般
• Research Field: Bacteriology (including Mycology)
• Research Institution: Gifu University
• Principal Investigator: EZAKI Takayuki 岐阜大学, 大学院・医学系研究科, 教授 (90151977)
• Co-Investigator(Kenkyū-buntansha): OHKUSU Kiyofumi 岐阜大学, 大学院・医学系研究科, 准教授 (40362173)
• Project Period (FY): 2008 – 2012
• Project Status: Completed (Fiscal Year 2012)
• Budget Amount: ¥18,200,000 (Direct Cost: ¥14,000,000、Indirect Cost: ¥4,200,000); Fiscal Year 2012: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000); Fiscal Year 2011: ¥2,860,000 (Direct Cost: ¥2,200,000、Indirect Cost: ¥660,000); Fiscal Year 2010: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000); Fiscal Year 2009: ¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000); Fiscal Year 2008: ¥6,240,000 (Direct Cost: ¥4,800,000、Indirect Cost: ¥1,440,000)
• Keywords: 細菌 / 系統分類 / ゲノム情報 / SNP / 多型 / 種の定義 / 菌種の定義 / 遺伝子多型 / リボソームタンパク / 全ゲノム / 高度病原体 / 属の定義 / 腸内細菌科 / 大腸菌 / 赤痢菌 / 種の多型 / ボツリヌス菌 / 細菌の命名 / 分類 / 系統 / 裁定委員会 / 全ゲノム配列 / 炭疽菌 / セレウス菌 / 病原因子 / dnaJ / 防御因子 / 浮腫因子 / 致死因 / 病原性大腸菌 / Shigella / E. coli / S. flexneri / S. dysenteriae

Research Abstract

From genome wide screening of house keeping gene (HKG) of high risk pathogens and the relatives, top 15 HKG were selected to differentiate BSL3 pathogens from the closely related nonpathogens. Diversity of concatenated these 15 HKG of BSL3 and the closely related nonpathogenic species was significantly bigger than the diversity of 16S rRNA.

Research Products

• [Journal Article] Use of blood-free enrichment broth in the development of a rapid protocol to detect Campylobacter in twenty-five grams of chicken meat (2013)
  • Author(s): Masahiro Hayashi, Sayoko Kubota-Hayashi, Tatsuya Natori, Takuya Mizuno, Machiko Miyata Shigeru Yoshida, Jiwei Zhang, Keiko Kawamoto, Kiyofumi Ohkusu, Souichi Makino, Takayuki Ezaki
  • Journal Title: Int. J. Food Microbiol. Volume: 163(1) Pages: 41-46
• [Journal Article] Use of blood-free enrichment broth in the development of a rapid protocol to detect Campylobacter in twenty-five grams of chicken meat (2013)
  • Author(s): Masahiro Hayashi
  • Journal Title: Int. J. Food Microbiol. Volume: 163 Pages: 41-46
  • Peer Reviewed
• [Journal Article] Role of Culture Colelction in Disasters. (2012)
  • Author(s): Ezaki,T., M. Hayashi, J.Zhang, T. Mizuno,T.Natori, and K.Ohkusu
  • Journal Title: J. Disaster Research Volume: 7 Pages: 768-774
• [Journal Article] Comparative analysis of MRSA strains isolated from cases of mupirocin ointment treatment in which eradication was successful and in which eradication failed. (2012)
  • Author(s): Masamichi Ogura, Hisako Yano, Mikinori Sato, Atsushi Nakamura, Yukio Wakimoto, Kiyofumi Ohkusu, and Takayuki Ezaki
  • Journal Title: J Infect Chemother
  • NAID: 10031167883
• [Journal Article] 原核生物の系統分類:細菌とアーキア(1) (2012)
  • Author(s): 江崎孝行
  • Journal Title: 生物の科学遺伝 Volume: 66 Pages: 220-226
• [Journal Article] Role of Culture Collections in Disasters (2012)
  • Author(s): Takayuki Ezaki
  • Journal Title: J. Disaster Research Volume: 7 Pages: 768-774
  • Peer Reviewed
• [Journal Article] 生物の分類と新しい分類体系；原核生物の系統分類と細菌及びアーキア（１） (2012)
  • Author(s): 江崎孝行
  • Journal Title: 生物の科学 遺伝 Volume: 66 Pages: 220-226
• [Journal Article] 生物の分類と新しい分類体系；原核生物の系統分類と細菌及びアーキア（2） (2012)
  • Author(s): 江崎孝行
  • Journal Title: 生物の科学 遺伝 Volume: 66 Pages: 340-347
• [Journal Article] 臨床微生物検査の今後の展望 (2012)
  • Author(s): 江崎孝行
  • Journal Title: 臨床と微生物 Volume: 39 Pages: 625-628
• [Journal Article] Genetic relatedness and identification of clinical strains of genus Campylobacterbased on dnaJ, 16SrDNA, groEL, and rpoB gene sequences. (2011)
  • Author(s): Pham Van Hung, Jiwei Zhang, Hayahi M, Yoshida S, Ohkusu K, Ezaki T.
  • Journal Title: Microbiol Cult. Coll Volume: 27 Pages: 1-12
• [Journal Article] Recurrent vascular catheter-related bacteremia caused by Delftia acidovorans with different antimicrobial susceptibility profiles (2011)
  • Author(s): Kawamura I, Yagi T, Hatakeyama K, Ohkura T, Ohkusu K, Takahashi Y, Kojima S, Hasegawa Y.
  • Journal Title: J. Infec. Chemoth.y Volume: 17 Pages: 111-113
  • NAID: 10027816902
• [Journal Article] Splenic abscess caused by Lactobacillus paracasei (2011)
  • Author(s): Doi A, Nakajo K, Kamiya T, Ohkusu K
  • Journal Title: J. Infec. Chemoth. Volume: 17 Pages: 122-125
  • NAID: 10027816954
• [Journal Article] A case of sepsis and meningitis caused by probable travel-related Neisseria meningitidisserogroup B infection: First report of N. meningitidis ST-4893 in Japan isolated from a returning traveler from France (2011)
  • Author(s): Nakayama A, Takahashi H, Ohkusu K, Shintani C, Hayakawa S, Ishii J, Wtanabe H.
  • Journal Title: Jpn J. Infec. Dise Volume: 64 Pages: 61-62
• [Journal Article] Atypical Osteomyelitis of the Skull Base and Craniovertebral Junction Caused by ActinomycesInfection. (2011)
  • Author(s): Nomura M, Shin M, Ohta M, Nukui Y, Ohkusu K, Saito N.
  • Journal Title: Neurol Med Chirl. Volume: 51 Pages: 64-66
• [Journal Article] DnaJsequences of Bacillus cereusstrains isolated from outbreaks of hospital infection are highly similar to Bacillus anthracis. (2011)
  • Author(s): Zhang J, van Hung P, Hayashi M, Yoshida S, Ohkusu K, Ezaki T.
  • Journal Title: Diag. Microbiol. Infect. Dise Volume: 70(3) Pages: 307-315
• [Journal Article] Suwabe 2011.A. Prosthetic valve endocarditis caused by Bartonella quintana in a patient during immunosuppressive therapies for collagen vascular diseases (2011)
  • Author(s): Yamada Y, Ohkusu K, Yanagihara M, Tsuneoka H, Ezaki T, Tsuboi J, Okabayashi H
  • Journal Title: Diag. Microbiol. Infect. Dise Volume: 70(3) Pages: 395-398
• [Journal Article] Mycobacterium shinjukuensesp. nov.; a slowly growing, nonchromogenic species isolated from human clinical specimens. (2011)
  • Author(s): Saito H, Iwamoto T, Ohkusu K, Otsuka Y, Akiyama Y, Sato S, Taguchi O, Sueyasu Y, Kawabe Y, Fujimoto H, Ezaki T. Butler R.
  • Journal Title: Int. J. Syst. Evol. Microbiol Volume: 61 Pages: 1927-1932
• [Journal Article] Refractory Chronic Pleurisy Caused by Helicobacter equorum-like bacterium in a Patient with X-linked Agammaglobulinemia. (2011)
  • Author(s): Funato M, Kaneko H, Ohkusu K, Sasai H,Kubota K, Ohnishi H, Kato Z, Hukao T, Kondo N.
  • Journal Title: J. Clin. Microbiol Volume: 49 Pages: 3432-3435
• [Journal Article] Genetic and biological features ofcatheter-associated Malassezia furfurfrom hospitalized adults (2011)
  • Author(s): Kaneko T, Murotani M, Ohkusu K, Sugita T, Makimura K
  • Journal Title: Med. Mycol Volume: 50 Pages: 75-80
• [Journal Article] Intraocular Penetration of Micafungin in Patient with Candida albicansEndophthalmitis. (2011)
  • Author(s): Mochizuki K, Suemori S, Udo K, Komori S, Ohkusu K, Yamada N, Ogura S
  • Journal Title: Intraocular Penetration of Micafungin in Patient with Candida albicansEndophthalmitis. Volume: 27 Pages: 531-533
• [Journal Article] Genetic relate dness and identification of clinical strains of genus Campylobacter baced on dnaJ, 16SrBNA, groEL, and rpoB gene sequences (2011)
  • Author(s): Pham Van Hung, Jiwei Zhang, Hayahi M, Yoshida S, Ohkusu K, Ezaki T
  • Journal Title: Microbiol Cult.Coll. Volume: 27 Pages: 1-12
  • Peer Reviewed
• [Journal Article] Recurrent vascular catheter-related bacteremia caused by Delftia acidovorans with different antimicrobial susceptibility profiles (2011)
  • Author(s): Kawamura I, Yagi T, Hatakeyama K, Ohkura T, Ohkusu K, Takahashi Y, Kojima S, Hasegawa Y
  • Journal Title: J Infection and Chemotherapy Volume: 17 Pages: 111-113
  • NAID: 10027816902
  • Peer Reviewed
• [Journal Article] DnaJ sequences of Bacillus cereus strains isolated from outbreaks of hospital infection are highly similar to Bacillus anthracis (2011)
  • Author(s): Zhang J, van Hung P, Hayashi M, Yoshida S, Ohkusu K, Ezaki T
  • Journal Title: Diagnostic Microbiology and Infectious Disease Volume: 70 Pages: 307-315
  • Peer Reviewed
• [Journal Article] Mycobacterium shinjukuense sp.nov. ; a slowly growing, nonchro mogenic species isolated from human clinical specimens (2011)
  • Author(s): Saito H, Iwamoto T, Ohkusu K, Otsuka Y, Akiyama Y, Sato S, Taguchi O, Sueyasu Y, Kawabe Y, Fujimoto H, Ezaki T.Butler R
  • Journal Title: Int.J.Syst.Evol.Microbiol. Volume: 61 Pages: 1927-1932
  • Peer Reviewed
• [Journal Article] Refractory Chronic Pleurisy Caused by Helicobacter equorum-like bacterium in a Patient with X-linked Agammaglobulinemia (2011)
  • Author(s): Funato M, Kaneko H, Ohkusu K, Sasai H, Kubota K, Ohnishi H, Kato Z, Hukao T, Kondo N
  • Journal Title: J.Clin.Microbiol. Volume: 49 Pages: 3432-3435
  • Peer Reviewed
• [Journal Article] Mycobacterium shinjukuense sp. nov.; a slowly growing, nonchromogenic species isolated from human clinical specimens. (2011)
  • Author(s): Saito H, Iwamoto T, Ohkusu K, Otsuka Y, Akiyama Y, Sato S, Taguchi O, Sueyasu Y, Kawabe Y, Fujimoto H, Ezaki T, Butler R.
  • Journal Title: Int J Syst Evol Microbiol. In press.
• [Journal Article] Streptococcus fryi sp. nov., a novel species with Lancefield group M antigens (2011)
  • Author(s): Tomida J, Sauer S, Morita Y, Ezaki T, Kawamura Y
  • Journal Title: FEMS Microbiol Lett Volume: 314 Pages: 95-100
  • Peer Reviewed
• [Journal Article] Mycobacterium shinjukuense sp.nov. ; a slowly growing, nonchromogenic species isolated from human clinical specimens. (2011)
  • Author(s): Saito H, Iwamoto T, Ohkusu K, Otsuka Y, Akiyama Y, Sato S, Taguchi O, Sueyasu Y, Kawabe Y, Fujimoto H, Ezaki T, Butler R
  • Journal Title: Int J Syst Evol Microbiol. Volume: 10(In press)
  • Peer Reviewed
• [Journal Article] DnaJ sequences of Bacillus cereus strains isolated from outbreaks of hospital infection are highly similar to Bacillus anthracis (2011)
  • Author(s): Zhang, J.W., Hung, P., Hayashi, M., Yoshida, S., Ohkusu, K., Ezaki, T.
  • Journal Title: Diagnostic Microbiology & Infectious Disease Volume: (In press)
  • Peer Reviewed
• [Journal Article] Molecular epidemiological analysis of methicillin-resistant staphylococci in a neonatal intensive care unit (2010)
  • Author(s): Takei Y, Yokoyama K, Katano H, Tsukiji M, Ezaki T.
  • Journal Title: Biocontrol Sci. Volume: 15 Pages: 129-138
  • NAID: 10027740167
• [Journal Article] DnaJ sequences of Bacillus cereus strains isolated from outbreaks of hospital infection are highly similar to Bacillus anthracis. (2010)
  • Author(s): Zhang, J.W., Hung, P.Hayashi, M., Yoshida, S., Ohkusu, K., Ezaki T.
  • Journal Title: Diag.Microbiol.& Infe.Disc. In press
• [Journal Article] Buruli ulcer caused by "Mycobacterium ulcerans subsp. shinshuense". (2010)
  • Author(s): Watanabe T, Ohkusu K, Nakanaga K, Ishii N, Nakashima K, Shindo M, Yoshida Y, Yamamoto O.
  • Journal Title: Eur J Dermatol. 20 Pages: 809-810
• [Journal Article] Pleuritis Caused by Campylobacterjejuni subspecies jejuni in a Patient Undergoing Long-Term Hemodialysis. (2010)
  • Author(s): Nagai M, Hirayama K, Ohishi T, Ohkusu K Kobayashi M.
• [Journal Article] Endogenous Nocardia farcinica endophthalmitis. (2010)
  • Author(s): Kawakami K, Sawada A, Mochizuki K, Takahashi K, Muto T, Ohkusu K.
  • Journal Title: Jpn J Ophthalmol. 54 Pages: 164-166
  • NAID: 10027203893
• [Journal Article] Orally supplemented Lactobacillus acidophilus strain L-92 inhibits passive and active cutaneous anaphylaxis as well as 2,4dinitrofluobenzene and mite fecal antigen induced atopic dermatitis-like skin leisions in mice (2010)
  • Author(s): Sha M.M., Yamamot, Y., Yamada Y., Yamashita H., Tanaka H., Ezaki T., Nagai H., Inagaki N
  • Journal Title: Microbiol.Immunol Volume: 54 Pages: 523-533
  • Peer Reviewed
• [Journal Article] Molecular epidemiological analysis of methicillin-resistant staphylococci in a neonatal intensive care unit. (2010)
  • Author(s): Takei Y, Yokoyama K, Katano H, Tsukiji M, Ezaki T
  • Journal Title: Biocontrol Sci Volume: 15 Pages: 38-129
  • NAID: 10027740167
  • Peer Reviewed
• [Journal Article] Endogenous Nocardia farcinica endophthalmitis (2010)
  • Author(s): Kawakami K, Sawada A, Mochizuki K, Takahashi K, Muto T, Ohkusu K
  • Journal Title: Jpn J Ophthalmol Volume: 54 Pages: 164-166
  • NAID: 10027203893
  • Peer Reviewed
• [Journal Article] Case of endophthalmitis following intravitreal injections of bevacizumab (2010)
  • Author(s): Komori S, Sawada A, Oguni T, Mochizuki K, Ohkusu K
  • Journal Title: Clin Ophthalmol. Volume: 4 Pages: 773-775
  • Peer Reviewed
• [Journal Article] 眼感染症トピックス眼感染症迅速診断のための遺伝子検査の適応と実践 (2010)
  • Author(s): 太楠清文, 望月清文, 江崎孝行
  • Journal Title: Medical Technology Volume: 38(6) Pages: 565-572
• [Journal Article] 核酸増幅法による感染症の診断 (2010)
  • Author(s): 大楠清文, 江崎孝行
  • Journal Title: 遺伝子診療学(第2版) Volume: 68 Pages: 501-505
• [Journal Article] 感染症迅速診断のための遺伝子検査 (2010)
  • Author(s): 大楠清文
  • Journal Title: 日本医事新報 Volume: 4518 Pages: 36-38
• [Journal Article] Unique histological characteristics of Scedosporium that could aid in its identification (2010)
  • Author(s): Kimura M, Maenishi O, Ito H, Ohkusu K
  • Journal Title: Pathology International Volume: 60 Pages: 131-136
  • Peer Reviewed
• [Journal Article] Case of endophthalmitis following intravitreal injections of bevacizumab (2010)
  • Author(s): Komori S, Sawada A, Oguni T, Mochizuki K, Ohkusu K
  • Journal Title: Clin Ophthalmol Volume: 4 Pages: 773-775
  • Peer Reviewed
• [Journal Article] Recurrent vascular catheter-related bacteremia caused by Delftia acidovorans with different antimicrobial susceptibility profiles (2010)
  • Author(s): Kawamura I, Yagi T, Hatakeyama K, Ohkura T, Ohkusu K, Takahashi Y, Kojima S, Hasegawa Y
  • Journal Title: Journal of Infection and Chemotherapy Volume: (in press)
  • NAID: 10027816902
  • Peer Reviewed
• [Journal Article] Buruli ulcer caused by "Mycobacterium ulcerans subsp.shinshuense". (2010)
  • Author(s): Watanabe T, Ohkusu K, Nakanaga K, Ishii N, Nakashima K, Shindo M, Yoshida Y, Yamamoto O
  • Journal Title: Eur J Dermatol Volume: 20 Pages: 809-810
  • Peer Reviewed
• [Journal Article] Case of endogenous endophthalmitis caused by Streptococcus equisimilis. (2010)
  • Author(s): Suemori S, Sawada A, Komori S, Mochizuki K, Ohkusu K, Takemura H.
  • Journal Title: Clin Ophthalmol Volume: 4 Pages: 773-775
  • Peer Reviewed
• [Journal Article] Pleuritis Caused by Campylobacter jejuni subspecies jejuni in a Patient Undergoing Long-Term Hemodialysis. (2010)
  • Author(s): Nagai M, Hirayama K, Ohishi T, Ohkusu K, Kobayashi M
  • Journal Title: Inter Med. Volume: 49 Pages: 2481-2486
  • NAID: 130000413381
  • Peer Reviewed
• [Journal Article] 感染症法下での高度病原体の分譲活動と輸送方法の課題 (2009)
  • Author(s): 江崎孝行
  • Journal Title: Microbiol.Cult.Col Volume: 26巻 Pages: 127-129
  • NAID: 10029759490
• [Journal Article] 分子系統解析に基づいた細菌の分類と同定 (2009)
  • Author(s): 大楠清文, 江畸孝行
  • Journal Title: Sysmex Journal 32 Pages: 44-45
• [Journal Article] Mycobacterium kyorinense sp. nov., a novel slowly growing Mycobacterium sp.related to Mycobacterium celatum isolated from human clinical specimens. (2009)
  • Author(s): Okazaki M, et.al
  • Journal Title: Int.J.Sys.Evol. 59 Pages: 1336-1341
  • Peer Reviewed
• [Journal Article] (2009)
  • Author(s): 江崎孝行
  • Journal Title: 微生物資源国際戦略ガイドブック((株)サイエンスフォーラム) Pages: 172-185
• [Journal Article] Rapid detection of Brucellaspp. by the loop-mediated isothermal amplification method. (2008)
  • Author(s): Ohtsuki,R., K. Kawamoto, Y. Kato, M.M. Sha, T. Ezaki, and S-I. Makino
  • Journal Title: J. Appl. Microbiol Pages: 1-9
• [Journal Article] First case report of sepsis caused by Mycobacterium wolinskyi in chronic myelogenous leukemia. (2008)
  • Author(s): Ohno T, Kishimoto W, Chihara D, Sakamoto T, Miyamoto K, Takeoka T, Tsuji M, Kida K, Ohkusu K, Ezaki T.
  • Journal Title: Diag. Microbiol. Infect.Dise Volume: 62(4) Pages: 433-436
• [Journal Article] An autopsy case of Erysipelothrix rhusiopathiaeendocarditis (2008)
  • Author(s): Yamamoto Y, Shioshita K, Takazono T, Seki M, Izumikawa K, Kakeya H, Yanagihara K, Tashiro T, Otsuka Y, Ohkusu K, Kohno S
  • Journal Title: Inter Med Volume: 47 Pages: 1437-1440
• [Presentation] DNA chromatography for rapid screening BSL3 pathogens BioDefense Conference Washington DC (2013)
  • Author(s): Takayuki Ezaki, M.Hayashi, T. Mizuno, S. Yoshida, T. Natori, I. Kanazawa, J. Zhang, and K.Ohkusu
  • Place of Presentation: USA
• [Presentation] DNA chromatography for rapid screening BSL 3 pathogens (2013)
  • Author(s): Takayuki Ezaki
  • Organizer: BioDefense Conference
  • Place of Presentation: Washington DC, USA
• [Presentation] Reconstruction of taxonomy of family Enterobacteriaceaeafter genomr wid analysis of house keeping genes (2012)
  • Author(s): Takayuki Ezaki
  • Organizer: 第35回、日本分子生物学会年会
  • Place of Presentation: 博多
• [Presentation] MALDI-TOF-MASを使ったGTC株の病原性因子保有株の品質保証へ向けた取り組み (2012)
  • Author(s): 江崎 孝行
  • Organizer: 第19回、日本微生物資源学会総会
  • Place of Presentation: かずさ
• [Presentation] DNA chromatography and blood-CO2 free enrichment culture for rapid detection of campylobacters in food (2012)
  • Author(s): Masahiro Hayashi
  • Organizer: 47th Annual joint Meeting on Cholera and other bacterial enteric infections
  • Place of Presentation: Chiba, Japan
• [Presentation] Reconstruction of taxonomy of family Enterobacteriaceae after genomr wid analysis of house keeping genes (2012)
  • Author(s): Takayuki Ezaki
  • Organizer: 第35回、日本分子生物学会年会
  • Place of Presentation: Hakata, Japan
• [Presentation] MALDI-TOF-MASを使ったGTC株の病原性因子保有株の品質保証へ向けた取り組み (2012)
  • Author(s): 江崎 孝行
  • Organizer: 第19回、日本微生物資源学会総会
  • Place of Presentation: Kazusa, Japan
• [Presentation] Shuffling Classification of genus Escherichia and Shigella for better identification of E.coli and Shigella spp.after complete genomeaera.Kolkata、India (2011)
  • Author(s): Ezaki T, Hayashi M, Mizuno T., Kanazawa I.Mori A, Ohkusu K
  • Organizer: Cholera & Other Bacterial Enteric Infections 46th annual Joint Panel Meeting
  • Place of Presentation: Kolkata、India
  • Year and Date: 2011-12-14
• [Presentation] 全ゲノム情報からFamily Enterobacteriaceaeの菌種、属レベルの分類指標となる多型遺伝子群および保存遺伝子群の選択とその根拠 (2011)
  • Author(s): 江崎孝行
  • Organizer: 第31回日本微生物系統分類研究会
  • Place of Presentation: 鈴木梅太郎記念ホール、和光
  • Year and Date: 2011-11-25
• [Presentation] Screening of Environmental Human, Animal and Plant Pathogens in Soil and Water (2011)
  • Author(s): Ezaki T
  • Organizer: 011 International Conference on Environmental OMICS
  • Place of Presentation: Guangzhou、China
  • Year and Date: 2011-11-11
• [Presentation] 全ゲノム情報からFamily Enterobacteriaceaeの各分類階級に有用な分類指標群の抽出とその系統解析 (2011)
  • Author(s): 江崎孝行、水野卓也、森麻美、金沢泉、林将大、吉田滋、張継偉、大楠清文
  • Organizer: 第48回、日本細菌学会中部支部総会
  • Place of Presentation: 名古屋
  • Year and Date: 2011-10-22
• [Presentation] Quick respiratory panel assay for screening of bacterial and viral pneumonia (2011)
  • Author(s): Ezaki T
  • Organizer: IUMS 2011
  • Place of Presentation: Sappro、Japan
  • Year and Date: 2011-09-09
• [Presentation] Shall We Spin out Classical Taxonomy of High Risk Pathogens Evenafter Complete Genome Era? (2011)
  • Author(s): Ezaki T
  • Organizer: IUMS 2011
  • Place of Presentation: Sappro、Japan
  • Year and Date: 2011-09-09
• [Presentation] Survival strategy of Salmonella entrica serovar Typhi during human infection (2011)
  • Author(s): Ezaki T., Hayashi M, Mizuno T., Kanazawa I, Mori A, Ohkusu K
  • Organizer: Ist Harpin International Symposium
  • Place of Presentation: Harpin、China
  • Year and Date: 2011-05-16
• [Presentation] Survival strategy of Salmonellaenterica serovar Typhi during human infection. (2011)
  • Author(s): Ezaki,T.
  • Organizer: The first harbin international symposium on Salmonella and other enteric bacteria :genomes and biology, 1st Harbin international Symposium on Salmonella and enteric pathogens
  • Place of Presentation: Harbin, China
  • Year and Date: 2011-05-15
• [Presentation] Screening of Environmental Human, Animal and PlantPathogens in Soil and Water (2011)
  • Author(s): Ezaki,T
  • Organizer: International Conference on Environmental OMICS Guangzhou
  • Place of Presentation: International Conference on Environmental OMICS Guangzhou
• [Presentation] Shall We Spin out Classical Taxonomy of High Risk Pathogens Even after Complete Genome Era IUMS (2011)
  • Author(s): Ezaki,T. T. Mizuno, I. Kanazawa, M. Hayashi, S. Yoshida, J.W. Zhang,and K. Ohkusu
  • Organizer: Symposium
  • Place of Presentation: Sappro
• [Presentation] A new blood free enrichment broth Campylobacter-Arcobacterdetection from foodand stool. Cholera & Other Bacterial EntericInfections (2011)
  • Author(s): Takuya Mizuno, Masahiro Hayashi, Asami Mori, Shigeru Yoshida Sayoko Hayashi, Machiko Miyata, Kiyofumi Ohkusu and Takayuki Ezaki
  • Organizer: US-Japan Cooperative Medical Sciene Program
  • Place of Presentation: Kolkata, India
• [Presentation] Shuffling Classification of genusEscherichiaand Shigellafor better Identification of E. coliand Shigella spp. after complete Genome Aera (2011)
  • Author(s): Takayuki Ezaki, Takuya Mizuno, Masahiro Hayashi, Asami Mori, Shigeru Yoshida Izumi Kanazawa, and Kiyofumi Ohkusu
  • Organizer: US-Japan Cooperative Medical Science Program
  • Place of Presentation: Kolkata, Indi
• [Presentation] History and future of taxonomists to unzip chromosomal information to define bacterial species;Speaker) (2010)
  • Author(s): Takayuki Ezaki
  • Organizer: The 30th anniversary symposium of the Japan Society for Microbial Systematics (Symposium)
  • Place of Presentation: Tokyo
  • Year and Date: 2010-12-09
• [Presentation] History and future of taxonomists to unzip chromosomal information to define bacterial species. (2010)
  • Author(s): Ezaki, T.
  • Organizer: The 30^<th> anniversary symposium of the Japan Society for Microbial Systematics.
  • Place of Presentation: Tokyo
  • Year and Date: 2010-12-09
• [Presentation] History and future of taxonomists to unzip chromosomal information to define bacterial species. (2010)
  • Author(s): Takayuki Ezaki
  • Organizer: The 30^<th> anniversary symposium of the Japan Society for Microbial Systematics
  • Place of Presentation: Tokyo
  • Year and Date: 2010-12-09
• [Presentation] 感染症法下での病原体の系統保存・分譲活動と教育 (2010)
  • Author(s): 江崎孝行
  • Organizer: バイオセーフティー学会
  • Place of Presentation: 横浜
  • Year and Date: 2010-12-06
• [Presentation] 感染症法下での病原体の系統保存・分譲活動と教育 (2010)
  • Author(s): 江崎孝行
  • Organizer: バイオセーフテイ学会
  • Place of Presentation: 横浜
  • Year and Date: 2010-12-06
• [Presentation] 感染症法下での病原体の系統保存・分譲活動と教育 (2010)
  • Author(s): 江崎孝行
  • Organizer: バイオセーフティ学会
  • Place of Presentation: 横浜
  • Year and Date: 2010-12-06
• [Presentation] ShufFling Classification ofhigh Risk pathogens after complete genome sequencing. (2010)
  • Author(s): Ezaki, T.
  • Organizer: International Symposium on Bacterial genomics evolution and pathogenesis.
  • Place of Presentation: Jiangsu, China
  • Year and Date: 2010-11-30
• [Presentation] Shuffling Classification of high Risk pathogens after complete genome sequencing (2010)
  • Author(s): Takayuki Ezaki
  • Organizer: International Symposium on Bacterial genomics, evolution and pathogenesis
  • Place of Presentation: Jiangsu, China
  • Year and Date: 2010-11-30
• [Presentation] 遺伝子検査用増菌培地およびカクテルプライマーを組み合わせた食品中の生菌の構築 (2010)
  • Author(s): 江崎孝行
  • Organizer: 第31回日本食品微生物学会総会
  • Place of Presentation: 大津
  • Year and Date: 2010-11-12
• [Presentation] 臨床微生物学的な思考法のすすめ (2010)
  • Author(s): 大楠清文
  • Organizer: 第43回中国四国医学検査学会
  • Place of Presentation: 松江市
  • Year and Date: 2010-11-07
• [Presentation] 微生物検査の流儀 培養の難しい菌の検出と遺伝子検査の活用法 (2010)
  • Author(s): 大楠清文
  • Organizer: 第43回中国四国医学検査学会
  • Place of Presentation: 松江市
  • Year and Date: 2010-11-07
• [Presentation] Rapid genetic screening of live food pathogens with a single enrichment culture and multiplex cocktail amplification method Next Generation Diagnostics fog infectious Diseases. (2010)
  • Author(s): Ezaki, T.
  • Organizer: 第14回汎太平洋新興感染症国際会議(malaysia)U.S.Japan Cooperative medical Science program
  • Place of Presentation: Penang, Malaysia
  • Year and Date: 2010-10-05
• [Presentation] Rapid genetic screening of live food pathogens with a single enrichment culture and multiplex cocktail amplification method. Next Generation Diagnostics for infectious Diseases. (2010)
  • Author(s): Takayuki Ezaki
  • Organizer: 第14回汎太平洋新興感染症国際会議(malaysia)
  • Place of Presentation: Penang, Malaysia
  • Year and Date: 2010-10-05
• [Presentation] Evaluation of Functional genes for classification of Pathogenic Bacteria. (2010)
  • Author(s): Ezaki, T.
  • Organizer: ICC12, International Society for Culture collection
  • Place of Presentation: Santa Catarina, Brazil
  • Year and Date: 2010-10-01
• [Presentation] Evaluation of Functional genes for classification of Pathogenic Bacteria (2010)
  • Author(s): Takayuki Ezaki
  • Organizer: ICC12, International Society for Culture collection
  • Place of Presentation: Santa Catarina, Brazil
  • Year and Date: 2010-10-01
• [Presentation] 一般病院技師を対象とした遺伝子検査の知識について (2010)
  • Author(s): 大楠清文
  • Organizer: 第49回中部医学検査検学会
  • Place of Presentation: 金沢市
  • Year and Date: 2010-09-18
• [Presentation] 最近 話題の細菌 Top10 (2010)
  • Author(s): 大楠清文
  • Organizer: 第23回臨床微生物迅速診断研究会
  • Place of Presentation: 岐阜
  • Year and Date: 2010-06-26
• [Presentation] 感染症法に伴う病原体の取扱い及び輸送の問題点 (2010)
  • Author(s): 江崎孝行
  • Organizer: 第17回日本微生物資源学会総会
  • Place of Presentation: 岐阜
  • Year and Date: 2010-06-18
• [Presentation] 全ゲノム解析・多型解析からみた独立菌種の遺伝子多形 (2010)
  • Author(s): 江崎孝行
  • Organizer: 17回日本微生物資源学会総会
  • Place of Presentation: 岐阜
  • Year and Date: 2010-06-18
• [Presentation] 薬剤耐性菌に関する最近の話題 耐性菌と遺伝子診断 (2010)
  • Author(s): 大楠清文, 江崎孝行
  • Organizer: 第58回日本化学療法学会総会
  • Place of Presentation: 長崎
  • Year and Date: 2010-06-04
• [Presentation] 保菌者レベルの少数の糞便内病原体の迅速な遺伝子検査法の作成 (2010)
  • Author(s): 江崎孝行、林将大、吉田滋、窪田佐代子, 他
  • Organizer: 第84回日本感染症学会総会
  • Place of Presentation: 京都
  • Year and Date: 2010-04-06
• [Presentation] 遺伝子解析技術を用いた感染症迅速診断の実践 (2010)
  • Author(s): 大楠清文、江崎孝行
  • Organizer: 第84回日本感染症学会総会
  • Place of Presentation: 京都
  • Year and Date: 2010-04-06
• [Presentation] Influence of different set of variable gene cluster analysis on the phylogenetic definition of bacterial species. (2010)
  • Author(s): Ezaki,T
  • Organizer: 2th International congress on culture collection
  • Place of Presentation: Brazil
• [Presentation] Rapid genetic screening of live food pathogens with a single enrichment culture and multiplex cocktail amplification method-Next Generation Diagnostics for infectious Diseases;Speaker) (2010)
  • Author(s): Ezaki,T
  • Organizer: 3rd International Symposium on Bacterial genomics
  • Place of Presentation: China
• [Presentation] Shuffling Classification of high Risk pathogens after complete genome sequencing evolution and pathogenesis (2010)
  • Author(s): Ezaki,T
  • Organizer: (Speaker) 14th U.S. Japan Cooperative medical Science program.
  • Place of Presentation: Malaysia
• [Presentation] 微生物検査における遺伝子検査技術の適応 (2009)
  • Author(s): 大楠清文
  • Organizer: 東北地区感染制御部門研修会特別講演
  • Place of Presentation: 仙台
  • Year and Date: 2009-11-28
• [Presentation] DnaJ as a hypervariable genetic marker to define bacterial species and the application to detect multiple targets in clinical specimens. (2009)
  • Author(s): Takayuki Ezaki
  • Organizer: Korean Society for Clinical Microbiology
  • Place of Presentation: ソウル
  • Year and Date: 2009-07-02
• [Presentation] 大腸菌と赤痢菌の再分類の提案 (2009)
  • Author(s): 江崎孝行
  • Organizer: 東海乳酸菌研究会
  • Place of Presentation: 名古屋
  • Year and Date: 2009-02-07
• [Presentation] 細菌の新しい分類体系に従った菌種の同定法 (2009)
  • Author(s): 江崎孝行
  • Organizer: 日本臨床微生物学会
  • Place of Presentation: 仙台
  • Year and Date: 2009-02-01
• [Presentation] Primer Cocktail Screening System of Live Enteric Pathogens in Food (2008)
  • Author(s): 林将大, 江崎孝行
  • Organizer: 日米コレラ合同研究会
  • Place of Presentation: 博多
  • Year and Date: 2008-11-18
• [Presentation] 食中毒細菌の検出・同定システムの新展開 (2008)
  • Author(s): 江崎孝行
  • Organizer: 日本食品微生物学
  • Place of Presentation: 岡山
  • Year and Date: 2008-11-12
• [Presentation] 感染症の診断と治療 : 細菌感染症 (2008)
  • Author(s): 江崎孝行
  • Organizer: 日本遺伝子診療学会
  • Place of Presentation: 仙台
  • Year and Date: 2008-08-01
• [Book] バイオセーフティ指針, 病原微生物のバイオセーフティ分類 (2010)
  • Author(s): 江崎孝行
  • Publisher: 東京:医歯薬出版
• [Book] バイオセーフテイ指針(病原微生物のバイオセーフテイ分類) (2010)
  • Author(s): 江崎孝行
• [Book] バイオセーフテイ指針(WHOおよびCDCの病原微生物取扱いガイドライン) (2010)
  • Author(s): 江崎孝行
• [Book] バイオセーフテイ指針(発熱外来のバイオセーフテイ) (2010)
  • Author(s): 江崎孝行
• [Book] バイオセーフテイ指針(付表バイオセーフテイ指針) (2010)
  • Author(s): 江崎孝行
• [Book] 病原微生物のバイオセーフティ分類 (2010)
  • Author(s): 江崎孝行
  • Total Pages: 150
  • Publisher: 医歯薬出版
• [Book] WHOおよびCDCの病原微生物取扱いガイドライン、バイオセーフティ指針 (2010)
  • Author(s): 江崎孝行
  • Total Pages: 150
  • Publisher: 医歯薬出版
• [Book] 発熱外来のバイオセーフティ (2010)
  • Author(s): 江崎孝行
  • Total Pages: 150
  • Publisher: 医歯薬出版
• [Book] 付表。バイオセーフティ指針 (2010)
  • Author(s): 江崎孝行
  • Total Pages: 150
  • Publisher: 医歯薬出版
• [Book] Gallicola. InPaul De Vos et al. eds, Bergey's manual of systematic bacteriology (2009)
  • Author(s): Ezaki,T.
  • Publisher: Springer. New York.
• [Book] 微生物の事典, 腸管感染症 (2008)
  • Author(s): 大楠清文, 野田万希子, 江崎孝行
  • Publisher: 朝倉書店
• [Book] 微生物の事典, レジオネラ感染症, Q熱 (2008)
  • Author(s): 大楠清文, 福永肇, 江崎孝行
  • Publisher: 朝倉書店
• [Remarks] Human Pathogenic Bacterial Collection GTC;病原微生物情報、菌株、弱毒株、分類情報を提供
  • URL: http://gtc.jpn.com/
• [Remarks] National Bioresource Project "pathogenic microbes;文部科学省が支援する生物基盤整備事業に参加書病原細菌の収集、保存、分譲を実施
  • URL: http://pathogenic.lab.nig.ac.jp/
• [Remarks]
  • URL: http://gtc.jpn.com