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Specific and quantitative detection of LAMP products from pathogens of laboratory animals using a newly developed electrochemical DNA chip.

Research Project

Project/Area Number 20500381
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Laboratory animal science
Research InstitutionTeikyo University (2009-2010)
Central Institute for Experimental Animals (2008)

Principal Investigator

GOTO Kazuo  Teikyo University, 医療技術学部, 准教授 (00205593)

Co-Investigator(Kenkyū-buntansha) HAYASHIMOTO Nobuhito  実験動物中央研究所, 実験動物研究部, 研究員 (30332208)
YASUDA Masahiko  実験動物中央研究所, 実験動物研究部, 研究員 (40353479)
Project Period (FY) 2008 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2010: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2009: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2008: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Keywordsヘリコバクター / DNAチップ / LAMP法 / PCR法 / Bacillus subtilis / Lactobacillus casei / NCマウス / マウスノロウイルス / PCR / 病原体 / マウス
Research Abstract

We developed a microfabricated electrochemical DNA chip for detection of LAMP/PCR products from 16S rRNA sequences of Helicobacter spp. This chip does not require DNA labeling, and the hybridization signal can be detected as an anodic current. The average anodic currents of 5 (H.bilis) and 8 (H.hepaticus) PCR positive samples derived from feces of spontaneously infected mice (Cp, Hb and Hh) were 27.9±7.2, 31.9±8.1, 29.3±10.1, and 27.6±3.0 nA, respectively. On the other hand, the average anodic currents of 27 (Hb) and 18 (Hh), PCR negative samples were 3.7±2.4 and - 1.0±1.7, and nA, respectively. The anodic current increased with increasing concentrations of pathogens. For experimentally infected samples, the results of PCR/electrophoresis were in complete accord with those of this system when anodic currents of 8.5 (Hb) and 2.4 (Hh) nA were taken as the cut-off value. The results suggested that the electrochemical DNA chip system is useful for specific and quantitative detection of LAMP/PCR products.

Report

(4 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • 2008 Annual Research Report
  • Research Products

    (23 results)

All 2010 2009 2008 Other

All Journal Article (17 results) (of which Peer Reviewed: 15 results) Presentation (4 results) Remarks (1 results) Patent(Industrial Property Rights) (1 results)

  • [Journal Article] Morphological and sequence analysis of mycoplasma sp. isolated from the oral cavity of a house musk shrew (Suncus murinus)2010

    • Author(s)
      Goto K., et., al.
    • Journal Title

      J.Vet.Med.Sci.

      Pages: 109-111

    • NAID

      130000134510

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Molecular phylogeny of the subfamily gerbillinae with emphasis on species living in the Xinjiang-Uygur autonomous region of China and based on the mitochondrial cytochrome b and cytochrome c oxidase subunit II genes2010

    • Author(s)
      Ito M., Goto K., et., al.
    • Journal Title

      Zoological Sci. 27

      Pages: 269-278

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Molecular phylogeny of the subfamily gerbillinae with emphasis on species living in the Xinjiang-Uygur autonomous region of china and based on the mitochondrial cytochrome b and cytochrome c oxidase subunit II genes.2010

    • Author(s)
      Mamoru Ito, Kazuo Goto, et., al
    • Journal Title

      Zoological Science

      Volume: 27 Pages: 269-278

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Morphological and sequence analysis of mycoplasma sp.isolated from the oral cavity of a house musk shrew.2010

    • Author(s)
      Kazuo Goto, Masahiko Yasuda, et., al.
    • Journal Title

      J.Vet.Med.Sci.

      Volume: 72 Pages: 109-111

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Molecular detection of murine norovirus from experimentally and spontaneously infected mice2009

    • Author(s)
      Goto K., et., al.
    • Journal Title

      Exp.Anim. 58

      Pages: 135-140

    • NAID

      10024838273

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Isolation and identification procedure for Staphlococcus aureus in laboratory mice and rats by combinaed use of chromogenic X-SA agar and specific polymerase chain reaction2009

    • Author(s)
      Hayashimoto N., Goto K., et., al.
    • Journal Title

      J.Vet.Med.Sci. 71

      Pages: 27-32

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] First trial in the developmental phase of the "performance evaluation program" based on the ICLAS animal quality network program : Self-assessment of microbiologica monitoring methods using test samples supplied by ICLAS2009

    • Author(s)
      Goto K., et., al.
    • Journal Title

      Exp.Anim. 58

      Pages: 47-52

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Molecular detection of murine norovirus from experimentally and sponta neously infected mice.2009

    • Author(s)
      Goto, et., al.
    • Journal Title

      Exp. Anim. 58

      Pages: 135-140

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] First trial in the developmental phase of the "Performance evaluation program based on the ICLAS animal quality network program.2009

    • Author(s)
      Goto, et., al.
    • Journal Title

      Exp. Anim. 58

      Pages: 47-52

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] マウスノロウイルスの状況と研究2009

    • Author(s)
      後藤一雄
    • Journal Title

      LABIO 21(日本実験動物協会) 38

      Pages: 9-13

    • Related Report
      2009 Annual Research Report
  • [Journal Article] First trial in the developmental phase of the "Performance Evaluation Program" based on the ICLAS animal quality network program2009

    • Author(s)
      Goto, K., Hayashimoto, N., Ishida, T., et.al.
    • Journal Title

      Experimental Animals 58

      Pages: 47-52

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] characteristic karyotype abnormalities including robertsonian translocations found in eight mouse embryonic stem cell lines2008

    • Author(s)
      Sugawara A., Goto K., et., al.
    • Journal Title

      Chromosome Sci. 11

      Pages: 29-36

    • NAID

      110007339277

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Study of a Bordetella Hindi isolate from a laboratory mouse2008

    • Author(s)
      Hayashimoto N., Goto K., et., al.
    • Journal Title

      Comp.Med. 58

      Pages: 440-446

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Isolation of Streptobacillus moniliformis from a pet rat2008

    • Author(s)
      Hayashimoto N., Goto K., et., al.
    • Journal Title

      J.Vet.Med.Sci. 70

      Pages: 493-495

    • NAID

      110006688956

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Ezperimental infection studies of Pasteurella pneumotoropica and V-factor dependent Pasteurellaceae for F344-rnu rats2008

    • Author(s)
      Hayashimoto N., Goto K., et., al.
    • Journal Title

      Exp.Anim. 57

      Pages: 57-63

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Experimental infection study of Pasteurella pneumotropica and V-factor dependent Pasteurellaceae for F344-rnu rats2008

    • Author(s)
      Hayashimoto, N., Yasuda, M., Goto, K., et.al
    • Journal Title

      Experimental Animals 57

      Pages: 57-63

    • NAID

      10020177619

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Study of a Bordetella hinzii isolate from a laboratory mouse2008

    • Author(s)
      Hayashimoto, N., Yasuda, M., Goto, K., et. al
    • Journal Title

      Comparative Medicine 58

      Pages: 440-446

    • Related Report
      2008 Annual Research Report
  • [Presentation] Clinical and Histopathological evaluation of Dermatophagoides farinae induced dermatitis and typhlitis in NC/Nga mice orally administrered Bacillus subtilis andLactobacillus casei2010

    • Author(s)
      Goto K., et., al.
    • Organizer
      A Joint FELASA-Scand-LAS Symposium
    • Place of Presentation
      Helsinki, Finland
    • Related Report
      2010 Final Research Report
  • [Presentation] わが国の実験用マウスにおけるマウスノロウイルスの汚染状況2009

    • Author(s)
      後藤一雄
    • Organizer
      第147回日本獣医学会学術集会
    • Place of Presentation
      宇都宮市
    • Year and Date
      2009-04-02
    • Related Report
      2010 Final Research Report
  • [Presentation] わが国の実験用マウスにおけるマウスノロウイルスの汚染状況2009

    • Author(s)
      後藤一雄
    • Organizer
      第147回日本獣医学会学術集会シンポジウム
    • Place of Presentation
      栃木県総合文化センター
    • Year and Date
      2009-04-02
    • Related Report
      2009 Annual Research Report
  • [Presentation] 電流検出型DNAチップを用いた実験動物感染症モニタリングシステムの開発2008

    • Author(s)
      堀内秀紀、後藤一雄、他
    • Organizer
      第31回日本分子生物学会総会
    • Place of Presentation
      神戸市
    • Related Report
      2010 Final Research Report
  • [Remarks] ホームページ等

    • Related Report
      2010 Final Research Report
  • [Patent(Industrial Property Rights)] ヘリコバクター属の微生物由来の核酸を特異的に増幅するためのプライマーセット、前記微生物を検知および/または分類するための方法2008

    • Inventor(s)
      後藤一雄, 他
    • Industrial Property Rights Holder
      (財)実験動物中央研究所
    • Industrial Property Number
      2008-309082
    • Filing Date
      2008-12-03
    • Related Report
      2010 Final Research Report

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Published: 2008-04-01   Modified: 2016-04-21  

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