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Development of a musculoskeletal computer model for laboratory mice

Research Project

Project/Area Number 20500384
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Laboratory animal science
Research InstitutionThe Institute of Physical and Chemical Research

Principal Investigator

OOTA SATOSHI  The Institute of Physical and Chemical Research, 情報解析技術室, 専任研究員 (30391890)

Co-Investigator(Kenkyū-buntansha) ATSUSHI Yoshiki  独立行政法人理化学研究所, 実験動物開発室, 室長 (40212310)
KAZUHIRO Kawamura  筑波大学, 数理物質科学研究科, 准教授 (40204771)
Project Period (FY) 2008 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2010: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2009: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2008: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Keywords筋骨格モデル / 逆運動学 / 運動機能 / 進化的相同性 / モーションキャプチャ / 写像 / 機能解放学的情報 / 実験用マウス / 筋腱構造 / X線CTスキャン / 進化 / Musculoskeletal model / Mutant mouse / Inverse kinematics / 突然変異マウス / 骨格モデル / 歩行データ
Research Abstract

We developed a musculoskeletal computer model for laboratory mice, whose genetic backgrounds have been established. We employed the motion capture technology to establish a totally new framework for mouse motor function analyses with the musculoskeletal computer model. To develop a reliable musculoskeletal computer model for laboratory mice, we devised a new method to map information on a human musculoskeletal model onto a mouse skeletal model. Furthermore, we performed validation and improvement of the model by using 3-dimensional geometries of tendon tissues reconstructed from sliced data of a transgenic mouse.

Report

(4 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • 2008 Annual Research Report
  • Research Products

    (24 results)

All 2010 2009 2008 Other

All Journal Article (9 results) (of which Peer Reviewed: 9 results) Presentation (11 results) Remarks (4 results)

  • [Journal Article] CT image segmentation using structural analysis.2010

    • Author(s)
      Hishida H., T.Michikawa, Y.Ohtake, H.Suzuki, S.Oota
    • Journal Title

      Proceedings of the 6th international conference on Advances in visual computing.(Springer-Verlag, Las Vegas, NV, USA.)

      Pages: 39-48

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] A new framework for studying the isochore evolution : estimation of the equilibrium GC content based on the temporal mutation rate model.2010

    • Author(s)
      Oota S., K.Kawamura, Y.Kawai, N.Saitou
    • Journal Title

      Genome Biol Evol 2

      Pages: 558-571

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Development of a coarse-grained skeletal model of laboratory mouse and its biomechanical applications. Reviewed electric materials.2010

    • Author(s)
      Oota S., A.Yoshiki, Y.Fujita, J.Humphries, K.Fukami-Kobayashi, Y.Obata, T.Rowe, Y.Nakamura
    • Journal Title

      1st International Conference on Applied Bionics and Biomechanics (ICABB-2010)(VENICE, ITALY.)

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Development of a coarse-grained skeletal model of laboratory mouse and its biomechanical applications2010

    • Author(s)
      Oota, S., A.Yoshiki, Y.Fujita, J.Humphries, K.Fukami-Kobayashi, Y.Obata, T.Rowe, Y.Nakamura
    • Journal Title

      Proceeding in 1st International Conference on Applied Bionics and Biomechanics (ICABB-2010)

      Volume: (Electric proceeding)

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A new framework for studying the isochore evolution : estimation of the equilibrium GC content based on the temporal mutation rato model2010

    • Author(s)
      Oota, S., K.Kawamura, Y.Kawai, N.Saitou
    • Journal Title

      Genome Biol Evol

      Volume: 2 Pages: 558-571

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] CT image segmentation using structural analysis2010

    • Author(s)
      Hishida, H., T.Michikawa, Y.Ohtake, H.Suzuki, S.Oota
    • Journal Title

      Proceedings of the 6th international conference on Advances in visual computing

      Volume: 3 Pages: 39-48

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Unique inbred strain MSM/Ms established from the Japanese wild mouse.2009

    • Author(s)
      Moriwaki K., N.Miyashita, A.Mita, H.Gotoh, K.Tsuchiya, H.Kato, K.Mekada, CNoro, S. Oota, A.Yoshiki, Y.Obata, H.Yonekawa, T.Shiroishi
    • Journal Title

      Exp Anim 58

      Pages: 123-134

    • NAID

      10024838237

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Four-dimensional quantitative analysis of the gait of mutant mice using coarse-grained motion capture2009

    • Author(s)
      Oota S., K.Mekada, Y.Fujita, J.Humphries, K.Fukami-Kobayashi, Y.Obata, R.T., Y.A.
    • Journal Title

      EMBS '09. 31st Annual International Conference of the IEEE.

      Pages: 5227-5230

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Four-dimensional quantitative analysis of the gait of mutant mice using coarse-grained motion capture2009

    • Author(s)
      Oota S, Mekada K, Fujita Y, Humphries J, Fukami-Kobayashi K, Obata Y, Rowe T, Yoshiki A.
    • Journal Title

      Conf Proc IEEE Eng Med Biol Soc. 1

      Pages: 5227-5230

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Presentation] CT Image Segmentation using Structural Analysis.2010

    • Author(s)
      HISHIDA H., T.MICHIKAWA, Y.OHTAKE, H.SUZUKI, S.OOTA
    • Organizer
      6th International Symposium on Visual Computing (ISVC06)
    • Place of Presentation
      Las Vegas, Nevada, USA
    • Year and Date
      2010-11-30
    • Related Report
      2010 Final Research Report
  • [Presentation] CT Image Segmentation using Structural Analysis.2010

    • Author(s)
      HISHIDA, H.
    • Organizer
      6th International Symposium on Visual Computing (ISVC06)
    • Place of Presentation
      Las Vegas
    • Year and Date
      2010-11-30
    • Related Report
      2010 Annual Research Report
  • [Presentation] Development of a coarse-grained skeletal model of laboratory mouse and its applications.2010

    • Author(s)
      Oota S., A.Yoshiki, Y.Fujita, J.Humphries, K.Fukami-Kobayashi, Y.Obata, T.Rowe, Y.Nakamura
    • Organizer
      1st International Conference on Applied Bionics and Biomechanics
    • Place of Presentation
      Venice, Italy
    • Year and Date
      2010-10-15
    • Related Report
      2010 Final Research Report
  • [Presentation] Development of a coarse-grained skeletal model of laboratory mouse and its applications2010

    • Author(s)
      Oota, S.
    • Organizer
      1st International Conference on Applied Bionics and Biomechanics
    • Place of Presentation
      Venice
    • Year and Date
      2010-10-15
    • Related Report
      2010 Annual Research Report
  • [Presentation] Analysis on mutant specific gait patterns of mutant mice with inverse dynamics.2010

    • Author(s)
      Oota S., Y.Nakamura, Y.Obata, A.Yoshiki
    • Organizer
      Neuro 2010
    • Place of Presentation
      Nagoya
    • Year and Date
      2010-09-04
    • Related Report
      2010 Final Research Report
  • [Presentation] Analysis on mutant specific gait patterns of mutant mice with inverse dynamics2010

    • Author(s)
      Oota, S.
    • Organizer
      Neuro 2010
    • Place of Presentation
      Nagoya
    • Year and Date
      2010-09-04
    • Related Report
      2010 Annual Research Report
  • [Presentation]2010

    • Author(s)
      Oota S., A.Yoshiki, H.Yokota, Y.Obata, Y.Nakamura, R.Himeno
    • Organizer
      Of Mice and Men : Biomechanical Modeling as a Tool to Translate Bone Biology Research into Clinical Practice 6th World Congress of Biomechanics (WCB 2010)
    • Place of Presentation
      Singapore
    • Year and Date
      2010-08-05
    • Related Report
      2010 Final Research Report
  • [Presentation] Of Mice and Men : Biomechanical Modeling as a Tool to Translate Bone Biology Research into Clinical Practice2010

    • Author(s)
      Oota, S.
    • Organizer
      6th World Congress of Biomechanics (WCB 2010)
    • Place of Presentation
      Singapore
    • Year and Date
      2010-08-05
    • Related Report
      2010 Annual Research Report
  • [Presentation] A new approach to analyze mutant specific gait patterns of mutant mice2009

    • Author(s)
      Oota S
    • Organizer
      第32回日本神経科学大会
    • Place of Presentation
      名古屋国際会議場
    • Year and Date
      2009-09-18
    • Related Report
      2009 Annual Research Report
  • [Presentation] Four-dimensional quantitative analysis of the gait of mutant mice using coarse-grained motion capture2009

    • Author(s)
      Oota S
    • Organizer
      31^<st> Annual International Conference of the IEEE Engineering in Medicine and Biology Sciety
    • Place of Presentation
      Hilton Minneapolis, Minnesota, USA
    • Year and Date
      2009-09-05
    • Related Report
      2009 Annual Research Report
  • [Presentation] 定量的な歩行パターン解析のための突然変異マウス筋骨格系モデルの構築2008

    • Author(s)
      太田聡史
    • Organizer
      第31回日本神経科学大会
    • Place of Presentation
      東京国際フォーラム
    • Year and Date
      2008-07-09
    • Related Report
      2008 Annual Research Report
  • [Remarks] ホームページ等

    • URL

      http://web.me.com/satoshi.oota/M.T.R./Home.html

    • Related Report
      2010 Final Research Report
  • [Remarks]

    • URL

      http://www.youtube.com/watch?v=_tPUfHKLquE

    • Related Report
      2010 Final Research Report
  • [Remarks]

    • URL

      http://web.me.com/satoshi.oota/Mouse_motor_functions/Objectives.html

    • Related Report
      2010 Annual Research Report
  • [Remarks]

    • URL

      http://www.brc.riken.go.jp/lab/animal/mailnews/nm200910_02e.html

    • Related Report
      2009 Annual Research Report

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Published: 2008-04-01   Modified: 2017-10-13  

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