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Characterization of new identified novel human AP endonuclease

Research Project

Project/Area Number 20510047
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Risk sciences of radiation/Chemicals
Research InstitutionTohoku University

Principal Investigator

KANNO Shin-ichiro  東北大学, 加齢医学研究所, 講師 (10400417)

Project Period (FY) 2008 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2010: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2009: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2008: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
KeywordsAP endonuclease / PARP1 / base excision repair (BER) / single strand break repair (SSBR) / base excision repair / single strand break repair / APエンドヌクレアーゼ / 活性酸素 / DNA修復 / 老化 / DNA損傷
Research Abstract

DUF2228 is a functionally unknown, conserved protein family distributed from worm to vertebrate including human. In insect and a part of worm DUF2228 protein has an additional domain containing a CYR motif (C2H2 zinc finger motif)in the N-terminal region. Since CYR motif was first identified in the human repair protein, PALF (ALPF), and found in various proteins of DNA metabolism, such as DNA repair and the DNA damage checkpoint, at their N-or C-termini, we hypothesized that DUF2228 family proteins have also DNA metabolism related functions. We isolated cDNA of Drosophila CG1218-PA and human C4orf27(APNX)belonging to DUF2228 and characterized these proteins. Here we show that ; 1)a Drosophila CG1218-PA protein accumulates at DNA damaged site in a poly-ADP-ribose-dependent manner. 2)Human APNX protein that lacks a CYR motif forms a hetero dimmer with PARP1 and accumulates at DNA damaged site in a PARP1-dependent manner. 3)CG1218-PA and APNX possess endo-and exonuclease activities against abasic site. 4)Suppression of the expression of APNX using siRNA in HeLa cells provided the cells with sensitivity to methyl methane sulfonate, which produces methylated bases leading to single-strand breaks. These data suggest that DUF2228 protein CG1218-PA and APNX play important roles in the repair of DNA base damage and single-strand breaks.

Report

(4 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • 2008 Annual Research Report
  • Research Products

    (8 results)

All 2011 2010 2008

All Journal Article (6 results) (of which Peer Reviewed: 6 results) Presentation (2 results)

  • [Journal Article] CAMP (C13orf8, ZNF828)is a novel regulator of kinetochore-microtubule attachment.2011

    • Author(s)
      Itoh, G, Kanno, S, Uchida, K, S, K, Chiba, S, Sugino, S, Watanabe, K, Mizuno, K, Yasui, A, Hirota, T, and Tanaka, K.
    • Journal Title

      EMBO J

      Volume: 30(1) Issue: 1 Pages: 130-44

    • DOI

      10.1038/emboj.2010.276

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] The ACF1 complex is required for DNA double-strand break repair in human cells2010

    • Author(s)
      Li Lan, Ayako Ui, Satoshi Nakajima, Kotomi Hatakeyama ; Mikiko Hoshi, Reiko Watanabe, Susan Janicki, Hideaki Ogiwara, Takashi Kohno, Shin-ichiro Kanno, Akira Yasui
    • Journal Title

      Moll. Cell.

      Volume: 40(6) Issue: 6 Pages: 976-87

    • DOI

      10.1016/j.molcel.2010.12.003

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Solution structure of a zinc-finger domain that binds to poly-ADP-ribose2010

    • Author(s)
      Isogai S, Kanno S, Ariyoshi M, Tochio H, Ito Y, Yasui A, Shirakawa M.
    • Journal Title

      Genes Cells.

      Volume: 15(2) Issue: 2 Pages: 101-10

    • DOI

      10.1111/j.1365-2443.2009.01369.x

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Solution structure of a zinc-finger domain that binds to poly-ADP-ribose2010

    • Author(s)
      Isogai S, Kanno S, Ariyoshi M, Tochio H, Ito Y, Yasui A, Shirakawa M
    • Journal Title

      Genes to Cells

      Volume: 15 Pages: 101-110

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Solution structure of a zinc-finger domain that binds to poly-ADP-ribose.2010

    • Author(s)
      Isogai S, Kanno S, Ariyoshi M, Tochio H, Ito Y, Yasui A, Shirakawa M.
    • Journal Title

      Genes Cells 15

      Pages: 101-110

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A polycomb group protein, PHF1, is involved in the response to DNA double-trandf breaks in human cell2008

    • Author(s)
      Hong, et.al.
    • Journal Title

      Nucleic Acids Res 36

      Pages: 2939-2947

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Presentation] DUF2228 family-Characterization of a novel human endo/exonuclease2010

    • Author(s)
      菅野新一郎、渡邊礼子、安井明
    • Organizer
      第33回日本分子生物学会
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2010-12-07
    • Related Report
      2010 Final Research Report
  • [Presentation] DUF2228 family-ヒトを含む真核生物の新規AP-endo/exonuclease-の解析2010

    • Author(s)
      菅野新一郎
    • Organizer
      分子生物学会
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2010-12-07
    • Related Report
      2010 Annual Research Report

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Published: 2008-04-01   Modified: 2016-04-21  

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