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Investigation of novel function of plant nuclear tRNA splicing enzymes that are localized in organelle

Research Project

Project/Area Number 20510186
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 基礎ゲノム科学
Research InstitutionShimane University

Principal Investigator

AKAMA Kazuhito  Shimane University, 生物資源科学部, 准教授 (50252896)

Project Period (FY) 2008 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2010: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2009: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2008: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Keywords遺伝子 / tRNA / イントロン / スプライシング / オルガネラ / tRNAリガーゼ / トントロン / インロン / 発現制御
Research Abstract

Plant nuclear genes encoding tRNA^<Tyr> and tRNA^<Met-e> are interrupted by introns. Splicing of precursor tRNAs is occurred in nucleus. However, tRNA ligase involved in ligation of 5'- and 3'- half of tRNA is localized in chloroplast as well. In order to evaluate the possibility that tRNA ligase plays as a role of repair on chloroplast tRNAs, dominant-negative tobacco mutant where a mutated tRNA ligase gene with amino acid substitution in the ligase domain is over-expressed. Wild-type and mutant plants were both subjected to oxidative stress and total tRNAs were extracted from these plants. Ratios of intact to cleaved tRNAs from cytoplasm and chloroplast were determined with northern analysis using specific tRNA probes. Results showed that several of cytosolic tRNAs are cleaved with the condition of 10mM H_2O_2, but there no significant difference of ratios of intact to degrading chloroplast tRNAs between wild-type and mutated plants.

Report

(4 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • 2008 Annual Research Report
  • Research Products

    (12 results)

All 2010 2009 Other

All Presentation (7 results) Book (2 results) Remarks (3 results)

  • [Presentation] 植物tRNAリガーゼの機能解析2010

    • Author(s)
      赤間一仁, Hildburg Beier
    • Place of Presentation
      熊本
    • Year and Date
      2010-03-18
    • Related Report
      2010 Final Research Report
  • [Presentation] 植物tRNAリガーゼの生体内機能2010

    • Author(s)
      赤間一仁、Hildburg Beier
    • Organizer
      第51回日本植物生理学会年会
    • Place of Presentation
      熊本大学(熊本市)
    • Year and Date
      2010-03-18
    • Related Report
      2009 Annual Research Report
  • [Presentation] 葉緑体におけるtRNAリガーゼの機能解析2009

    • Author(s)
      赤間一仁, Hildurg Beier
    • Organizer
      第32回日本分子生物学会
    • Place of Presentation
      横浜
    • Year and Date
      2009-12-10
    • Related Report
      2010 Final Research Report
  • [Presentation] Functional analysis of plant precursor tRNA splicing enzymes that are targeted to multiple cellular compartments2009

    • Author(s)
      Kazuhito Akama, Hildburg Beier
    • Organizer
      9^<th> International Congress on Plant Molecular Biology
    • Place of Presentation
      St.Louis, Missouri, USA
    • Year and Date
      2009-11-28
    • Related Report
      2009 Annual Research Report
  • [Presentation] Functional analysis of plant precursor tRNA splicing enzymes that are targeted to multiple cellular compartments2009

    • Author(s)
      Kazuhito Akama, Hildburg Beier
    • Organizer
      9^<th> International Congress on Plant Molecular Biology
    • Place of Presentation
      St. Louis, Missouri, USA
    • Year and Date
      2009-10-28
    • Related Report
      2010 Final Research Report
  • [Presentation] 植物の前駆体tRNAスプライシング酵素は核以外にオルガネラにも局在する2009

    • Author(s)
      赤間一仁, Hildburg Beier
    • Organizer
      第50回日本植物生理学会年会
    • Place of Presentation
      名古屋
    • Year and Date
      2009-03-22
    • Related Report
      2010 Final Research Report
  • [Presentation] 植物の前駆体tRNAスプライシング酵素は核以外にオルガネラにも局在する2009

    • Author(s)
      赤間 一仁, Hildburg Beier
    • Organizer
      第50回日本植物生理学会年会
    • Place of Presentation
      名古屋大学(名古屋)
    • Year and Date
      2009-03-22
    • Related Report
      2008 Annual Research Report
  • [Book] ノーベル賞の生命科学入門-RNAが拓く新世界-(第6章分断遺伝子の発見)(菊池洋編)2009

    • Author(s)
      赤間一仁
    • Publisher
      講談社サイエンティフィク,東京
    • Related Report
      2010 Final Research Report
  • [Book] ノーベル賞の生命科学入門RNAが拓く新世界2009

    • Author(s)
      赤間一仁
    • Total Pages
      190
    • Publisher
      講談社
    • Related Report
      2009 Annual Research Report
  • [Remarks] 研究室ホームページの公開(2010年4月)

    • URL

      http://www.ipc.shimane-u.ac.jp/akama-lab/index.html

    • Related Report
      2010 Final Research Report
  • [Remarks]

    • URL

      http://www.ipc.shimane-u.ac.jp/akama-lab/index.html

    • Related Report
      2010 Annual Research Report
  • [Remarks]

    • URL

      http://www.ipc.shimane-u.ac.jp/akama-lab/achievement.html

    • Related Report
      2009 Annual Research Report

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Published: 2008-04-01   Modified: 2016-04-21  

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