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Regulation assay of light dependent transcription using a cell-free system derived from Arabidopsis

Research Project

Project/Area Number 20510188
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 基礎ゲノム科学
Research InstitutionNagoya City University

Principal Investigator

YUKAWA Yasushi  Nagoya City University, 大学院・システム自然科学研究科, 教授 (70381902)

Project Period (FY) 2008 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2010: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2009: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2008: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywords光依存 / 転写制御 / シロイヌナズナ / 無細胞 / 遺伝子発現 / 転写 / 無細胞系 / 光依存転写 / MM2d細胞 / 培養細胞 / 液胞除去 / 光合成 / 光依存制御 / MM2d株
Research Abstract

Two Cell-free transcription assay systems were established from rapidly growing Arabidopsis cultured cell MM2d line. The cultured cells were etiolated when the cells were growing under dark condition and were greening when the cells were growing under light condition. Using these two different colored cells, in vitro transcription systems were established. And then, using the two in vitro transcription systems, we have successfully assayed light dependent transcription regulation using Arabidopsis ribulose-1,5-bis-phosphate carboxylase/oxygenase (rbcS) genes.

Report

(4 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • 2008 Annual Research Report
  • Research Products

    (33 results)

All 2011 2010 2009 2008 Other

All Journal Article (2 results) (of which Peer Reviewed: 2 results) Presentation (30 results) Remarks (1 results)

  • [Journal Article] A common sequence motif involved in selection of transcription start sites of Arabidopsis and budding yeast tRNA genes.2011

    • Author(s)
      Yasushi Yukawa, Giorgio Dieci, Mircko Alzapiedi, Asako Hiraga, Katsuaki Hirai, Yoshiharu Yamamoto, Masahiro Sugiura.
    • Journal Title

      Genomics 97

      Pages: 166-172

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] A common sequence motif involved in selection of transcription start sites of Arabidopsis and budding yeast tRNA genes2011

    • Author(s)
      Yasushi Yukawa, Giorgio Dieci, Mircko Alzapiedi, Asako Hiraga, Katsuaki Hirai, Yoshiharu Yamamoto, Masahiro Sugiura.
    • Journal Title

      Genomics

      Volume: 97 Pages: 166-172

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Presentation] シロイヌナズナにおけるUSE結合タンパク質複合体の単離解析2010

    • Author(s)
      町田瑠璃子、柴田恵利、大谷美沙都、杉山宗隆、杉浦昌弘、湯川泰
    • Organizer
      第33回日本分子生物学会年会 第83回日本生化学会大会合同大会
    • Place of Presentation
      神戸
    • Year and Date
      2010-12-09
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] Requirements for translation initiation of rps2 mRNA in tobaccochloroplast.2010

    • Author(s)
      Hiroshi Kuroda, Yuka Adachi, Shin-ichiro Ozawa, Yuichiro Takahashi, Yasushi Yukawa, Masahiro Sugiura
    • Organizer
      第33回日本分子生物学会年会 第83回日本生化学会大会合同大会
    • Place of Presentation
      神戸
    • Year and Date
      2010-12-09
    • Related Report
      2010 Annual Research Report
  • [Presentation] Functional analysis of novel small RNA in Arabidopsis thaliana2010

    • Author(s)
      呉娟, 岡田敏浩, 杉浦昌弘, 湯川泰
    • Organizer
      BMB2010
    • Place of Presentation
      Kobe
    • Year and Date
      2010-12-08
    • Related Report
      2010 Final Research Report
  • [Presentation] シロイヌナズナ光合成遺伝子の光依存転写制御の解析2010

    • Author(s)
      宮崎綾香、岩田真也、杉浦昌弘、湯川泰
    • Organizer
      第33回日本分子生物学会年会 第83回日本生化学会大会合同大会
    • Place of Presentation
      神戸
    • Year and Date
      2010-12-08
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] Functional analysis of novel small RNA in Arabidopsis thaliana2010

    • Author(s)
      Juan Wu, Toshihiro Okada, Masahiro Sugiura, Yasushi Yukawa
    • Organizer
      第33回日本分子生物学会年会 第83回日本生化学会大会合同大会
    • Place of Presentation
      神戸
    • Year and Date
      2010-12-08
    • Related Report
      2010 Annual Research Report
  • [Presentation] Functional analysis of novel small RNA in Arabidopsis thaliana2010

    • Author(s)
      呉娟, 岡田敏浩, 杉浦昌弘, 湯川泰
    • Organizer
      21st International Conference on Arabidopsis Research
    • Place of Presentation
      Yokohama
    • Year and Date
      2010-06-08
    • Related Report
      2010 Final Research Report
  • [Presentation] Functional analysis of novel small RNA in Arabidopsis thaliana2010

    • Author(s)
      Juan Wu, Toshihiro Okada, Masahiro Sugiura, Yasushi Yukawa
    • Organizer
      21st International Conference on Arabidopsis Research
    • Place of Presentation
      横浜
    • Year and Date
      2010-06-08
    • Related Report
      2010 Annual Research Report
  • [Presentation] Functional analysis of novel small RNA in Arabidopsis thaliana2010

    • Author(s)
      呉娟, 岡田敏浩, 杉浦昌弘, 湯川泰
    • Organizer
      International Symposium on Biodiversity Sciences "Genome, Evolution and Environment"
    • Place of Presentation
      Nagoya
    • Related Report
      2010 Final Research Report
  • [Presentation] Functional analysis of novel small RNA in Arabidopsis thaliana2010

    • Author(s)
      Juan Wu.Toshihiro Okada, Masahiro Sugiura, Yasushi Yukawa
    • Organizer
      International Symposium on Biodiversity Sciences "Genome, Evolution and Environment"
    • Place of Presentation
      名古屋
    • Related Report
      2010 Annual Research Report
  • [Presentation] 高等植物mRNAスプライシングのin vitro解析2009

    • Author(s)
      岩田有加、杉浦昌弘、湯川泰
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2009-12-11
    • Related Report
      2010 Final Research Report
  • [Presentation] 葉緑体mRNAの5'非翻訳領域とタンパク質コード領域の適合性検証2009

    • Author(s)
      大羽由衣、湯川眞希、杉浦昌弘、湯川泰
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2009-12-11
    • Related Report
      2010 Final Research Report 2009 Annual Research Report
  • [Presentation] シロイヌナズナにおけるUSE結合転写因子複合体の単離解析2009

    • Author(s)
      柴田恵利、大谷美沙都、杉山宗隆、杉浦昌弘、湯川泰
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2009-12-11
    • Related Report
      2010 Final Research Report 2009 Annual Research Report
  • [Presentation] 高等植物mRNAスプライシングの in vitro 解析2009

    • Author(s)
      岩田有加, 杉浦昌弘, 湯川泰
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2009-12-11
    • Related Report
      2009 Annual Research Report
  • [Presentation] シロイヌナズナ新規低分子RNA欠損株のオーキシン応答性2009

    • Author(s)
      二村博、杉浦昌弘、湯川泰
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2009-12-10
    • Related Report
      2010 Final Research Report 2009 Annual Research Report
  • [Presentation] シロイヌナズナの新規低分子RNAの機能解析2009

    • Author(s)
      呉娟、岡田敏浩、湯川泰
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2009-12-10
    • Related Report
      2010 Final Research Report 2009 Annual Research Report
  • [Presentation] タバコ培養細胞由来細胞質in vitro翻訳系の開発2009

    • Author(s)
      山本裕子、湯川眞希、杉浦昌弘、湯川泰
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2009-12-09
    • Related Report
      2010 Final Research Report
  • [Presentation] タバコ培養細胞由来細胞質 in vitro 翻訳系の開発2009

    • Author(s)
      山本裕子, 湯川眞希, 杉浦昌弘, 湯川泰
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2009-12-09
    • Related Report
      2009 Annual Research Report
  • [Presentation] シロイヌナズナの新規低分子RNAの機能解析2009

    • Author(s)
      呉娟、岡田敏浩、湯川泰
    • Organizer
      第73回日本生化学会中部支部例会・シンポジウム
    • Place of Presentation
      名古屋
    • Year and Date
      2009-05-23
    • Related Report
      2010 Final Research Report
  • [Presentation] 葉緑体mRNAの5'翻訳領域の切断と翻訳効率2009

    • Author(s)
      黒田洋詩、足達由佳、湯川泰、杉浦昌弘
    • Organizer
      日本植物生理学会第50回年会
    • Place of Presentation
      名古屋
    • Year and Date
      2009-03-22
    • Related Report
      2010 Final Research Report
  • [Presentation] タバコ葉緑体翻訳反応における5'非翻訳領域とコード領域の適合性検証2009

    • Author(s)
      大羽由衣、湯川眞希、杉浦昌弘、湯川泰
    • Organizer
      日本植物生理学会第50回年会
    • Place of Presentation
      名古屋
    • Year and Date
      2009-03-22
    • Related Report
      2010 Final Research Report
  • [Presentation] タバコ葉緑体翻訳反応における 5'非翻訳領域とコード領域の適合性検証2009

    • Author(s)
      大羽 由衣, 湯川 眞希, 杉浦昌弘, 湯川 泰
    • Organizer
      日本植物生理学会第50回年会
    • Place of Presentation
      名古屋
    • Year and Date
      2009-03-22
    • Related Report
      2008 Annual Research Report
  • [Presentation] 葉緑体psbD-psbC 翻訳開始機構の解析2008

    • Author(s)
      足達由佳、黒田洋詩、杉浦昌弘、湯川泰
    • Organizer
      第31回日本分子生物学会年会 第81回日本生化学会大会 合同大会
    • Place of Presentation
      神戸
    • Year and Date
      2008-12-10
    • Related Report
      2010 Final Research Report
  • [Presentation] 葉緑体psbD-psbC翻訳開始機構の解析2008

    • Author(s)
      足達 由佳, 黒田 洋詩, 杉浦昌弘, 湯川 泰
    • Organizer
      第31回日本分子生物学会年会 第81回日本生化学会大会 合同大会
    • Place of Presentation
      神戸
    • Year and Date
      2008-12-10
    • Related Report
      2008 Annual Research Report
  • [Presentation] シロイヌナズナ培養細胞核由来のin vitro 転写系の開発2008

    • Author(s)
      岩田真也、杉浦昌弘、湯川泰
    • Organizer
      第31回日本分子生物学会年会 第81回日本生化学会大会 合同大会
    • Place of Presentation
      神戸
    • Year and Date
      2008-12-09
    • Related Report
      2010 Final Research Report
  • [Presentation] イネ新規non-coding RNAの探索2008

    • Author(s)
      西田満帆、杉浦昌弘、湯川泰
    • Organizer
      第31回日本分子生物学会年会 第81回日本生化学会大会 合同大会
    • Place of Presentation
      神戸
    • Year and Date
      2008-12-09
    • Related Report
      2010 Final Research Report
  • [Presentation] イネ新規non-coding RNA の探索2008

    • Author(s)
      西田 満帆, 杉浦 昌弘, 湯川 泰
    • Organizer
      第31回日本分子生物学会年会 第81回日本生化学会大会 合同大会
    • Place of Presentation
      神戸
    • Year and Date
      2008-12-09
    • Related Report
      2008 Annual Research Report
  • [Presentation] シロイヌナズナ培養細胞核由来の in vitro転写系の開発2008

    • Author(s)
      岩田 真也, 杉浦 昌弘, 湯川 泰
    • Organizer
      第31回日本分子生物学会年会 第81回日本生化学会大会 合同大会
    • Place of Presentation
      神戸
    • Year and Date
      2008-12-09
    • Related Report
      2008 Annual Research Report
  • [Presentation] 葉緑体 in vitro翻訳系を用いた翻訳機構の解析2008

    • Author(s)
      黒田 洋詩, 湯川 眞希, 鈴木晴香, 湯川 泰, 杉浦 昌弘
    • Organizer
      大阪大学蛋白質研究所セミナー国際シンポジウム「葉緑体のすべてに迫る」
    • Place of Presentation
      大阪
    • Year and Date
      2008-10-14
    • Related Report
      2008 Annual Research Report
  • [Presentation] シロイヌナズナ培養細胞核由来のin vitro 転写系の開発2008

    • Author(s)
      岩田真也、杉浦昌弘、湯川泰
    • Organizer
      日本遺伝学会第80回大会
    • Place of Presentation
      名古屋
    • Year and Date
      2008-09-05
    • Related Report
      2010 Final Research Report
  • [Presentation] シロイヌナズナ培養細胞核由来の in vitro転写系の開発2008

    • Author(s)
      岩田 真也, 杉浦 昌弘, 湯川 泰
    • Organizer
      日本遺伝学会第80回大会
    • Place of Presentation
      名古屋
    • Year and Date
      2008-09-05
    • Related Report
      2008 Annual Research Report
  • [Remarks] ホームページ等

    • URL

      http://www.nsc.nagoya-cu.ac.jp/~yyuk/

    • Related Report
      2010 Final Research Report

URL: 

Published: 2008-04-01   Modified: 2016-04-21  

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