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Construction of Artificial Biocatalysts containing a Nonnatural Dinuclear Active Site

Research Project

Project/Area Number 20559002
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Chemistry related to living body
Research InstitutionOsaka University

Principal Investigator

ONODA Akira  大阪大学, 工学研究科, 助教 (60366424)

Project Period (FY) 2008 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥630,000)
Fiscal Year 2010: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2009: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2008: ¥1,300,000 (Direct Cost: ¥1,300,000)
Keywords金属タンパク質 / 多核金属錯体 / 鉄二核中心 / 人工タンパク質 / 酸化反応 / 進化工学 / 酵素触媒
Research Abstract

Artificial metalloenzymes containing unnatural multinuclear core were constructed in this project. Dioxygen-binding diiron protein, DcrH-Hr, was studied to elucidate the characteristics and the approaches using a mutation of amino acid residues around the active site led to conversion of the oxygen-binding function. Successful incorporation of a diiron hexacarbonyl core into the protein matrix of cytochrome c provided us artificial hydrogenase capable of photocatalytic hydrogen evolution in an aqueous solution.

Report

(4 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • 2008 Annual Research Report
  • Research Products

    (53 results)

All 2011 2010 2009 2008 Other

All Journal Article (18 results) (of which Peer Reviewed: 6 results) Presentation (25 results) Remarks (2 results) Patent(Industrial Property Rights) (8 results) (of which Overseas: 6 results)

  • [Journal Article] Crystal Structure and Spectroscopic Studies of a Stable Mixed-Valent State of the Hemerythrin-like Domain of a Bacterial Chemotaxis Protein2011

    • Author(s)
      A. Onoda, Y. Okamoto, H. Sugimoto, Y. Shiro, T. Hayashi
    • Journal Title

      Inorg. Chem

      Volume: 50 Pages: 4892-4899

    • Related Report
      2010 Final Research Report
  • [Journal Article] A Hydrogenase Model System Based on the Sequence of Cytochrome c : Photochemical Hydrogen Evolution in Aqueous Media2011

    • Author(s)
      Y. Sano, A. Onoda, T. Hayashi
    • Journal Title

      Chem. Commun

      Pages: 8229-8231

    • Related Report
      2010 Final Research Report
  • [Journal Article] A Chemically-controlled Supramolecular Protein Polymer Formed by a Myoglobin-based Self-assembly System2011

    • Author(s)
      K. Oohora, A. Onoda, H. Kitagishi, H. Yamaguchi, A. Harada, T. Hayashi
    • Journal Title

      Chem. Sci

      Volume: 2 Pages: 1033-1038

    • Related Report
      2010 Final Research Report
  • [Journal Article] Preparation and Reactivity of a Tetranuclear Fe(II) Core in the Metallothioneinα-Domain2011

    • Author(s)
      Y. Sano, A. Onoda, R. Sakurai, H. Kitagishi, T. Hayashi
    • Journal Title

      J. Inorg. Biochem

      Volume: 105 Pages: 702-708

    • Related Report
      2010 Final Research Report
  • [Journal Article] Crystal Structure and Spectroscopic Studies of a Stable Mixed-Valent State of the Hemerythrin-like Domain of a Bacterial Chemotaxis Protein2011

    • Author(s)
      A.Onoda, Y.Okamoto, H.Sugimoto, Y.Shiro, T.Hayashi
    • Journal Title

      Inorg.Chem.

      Volume: 50 Pages: 4892-4899

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A Hydrogenase Model System Based on the Sequence of Cytochromec : Photochemical Hydrogen Evolution in Aqueous Media2011

    • Author(s)
      K.Oohora, A.Onoda, H.Kitagishi, H.Yamaguchi, A.Harada, T.Hayashi
    • Journal Title

      Chem.Sci.

      Pages: 1033-1038

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Preparation and Reactivity of a Tetranuclear Fe(II) Core in the Metallothionein α-Domain2011

    • Author(s)
      Y.Sano, A.Onoda, R.Sakurai, H.Kitagishi, T.Hayashi
    • Journal Title

      J.Inorg.Biochem.

      Volume: 105 Pages: 702-708

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Supramolecular Hemoprotein. Gold Nanoparticle Conjugates2010

    • Author(s)
      A. Onoda, Y. Ueya, T. Sakamoto, T. Uematsu, T. Hayashi
    • Journal Title

      Chem. Commun

      Pages: 9107-9109

    • Related Report
      2010 Final Research Report
  • [Journal Article] DNA-binding Hemoproteins Tethering Polyamine Interface2010

    • Author(s)
      A. Onoda, H. Nagai, S. Koga, T. Hayashi
    • Journal Title

      Bull. Chem. Soc. Jpn

      Volume: 83 Pages: 375-377

    • NAID

      10027173310

    • Related Report
      2010 Final Research Report
  • [Journal Article] Supramolecular Protein. Protein Complexation via Specific Interaction Between Glycosylated Myoglobin and Sugar-binding Protein2010

    • Author(s)
      H. Nagai, A. Onoda, T. Matsuo, T. Hayashi
    • Journal Title

      Supramol. Chem

      Volume: 22 Pages: 57-64

    • Related Report
      2010 Final Research Report
  • [Journal Article] Supramolecular Hemoprotein-Gold Nanoparticle Conjugates2010

    • Author(s)
      A.Onoda, Y.Ueya, T.Sakamoto, T.Uematsu, T.Hayashi
    • Journal Title

      Chem.Commun.

      Pages: 9107-9109

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] DNA-binding Hemoproteins Tethering Polyamine Interface2010

    • Author(s)
      A.Onoda, H.Nagai, S.Koga, T.Hayashi
    • Journal Title

      Bull.Chem.Soc.Jpn.

      Volume: 83 Pages: 375-377

    • NAID

      10027173310

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Supramolecular Protein-Protein Complexation via Specific Interaction Between Glycosylated Myoglobin and Sugar-binding Protein2010

    • Author(s)
      H.Nagai, A.Onoda, T.Matsuo, T.Hayashi
    • Journal Title

      Supramol.Chem.

      Volume: 22 Pages: 57-64

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Alignment of Gold Clusters on DNA via a DNA-recognizing Zinc Finger-Metallothionein Fusion Protein2009

    • Author(s)
      S. Ariyasu, A. Onoda, R. Sakamoto, T. Yamamura
    • Journal Title

      Bioconjugate Chem

      Volume: 20 Pages: 2278-2285

    • Related Report
      2010 Final Research Report
  • [Journal Article] Minimal Motif Peptide Structure of Metzincin Clan Zinc Peptidases in Micelles2009

    • Author(s)
      A. Onoda, T. Suzuki, H. Ishizuka, R. Sugiyama, S. Ariyasu, T. Yamamura
    • Journal Title

      J. Pep. Sci

      Volume: 15 Pages: 832-841

    • Related Report
      2010 Final Research Report
  • [Journal Article] Porphyrin Arrays Responsive to Additives. Fluorescence Tuning2009

    • Author(s)
      T. Yamamura, S. Suzuki, T. Taguchi, A. Onoda, T. Kamachi, I. Okura
    • Journal Title

      J. Am. Chem. Soc

      Volume: 131 Pages: 11719-11726

    • Related Report
      2010 Final Research Report
  • [Journal Article] Circular Dichroism of Neutral Zinc Porphyrin-Oligonucleotide Conjugates Modified with Flexible Linker2009

    • Author(s)
      A. Onoda, M. Igarashi, S. Naganawa, K. Sasaki, S. Ariyasu, T. Yamamura
    • Journal Title

      Bull. Chem. Soc. Jpn

      Volume: 82 Pages: 12880-1286

    • NAID

      10025864717

    • Related Report
      2010 Final Research Report
  • [Journal Article] Conjugation of Au11 Cluster with Cys-rich Peptides Containing the.-domain of Metallothionein2009

    • Author(s)
      S. Ariyasu, A. Onoda, R. Sakamoto, T. Yamamura
    • Journal Title

      Dalton Trans

      Volume: 21 Pages: 3742-3747

    • Related Report
      2010 Final Research Report
  • [Presentation] 機能改変を指向した酸素運搬鉄二核タンパク質の配位アミノ酸変異体の調製および反応性の検討2011

    • Author(s)
      岡本泰典・小野田晃・林高史
    • Organizer
      第44回酸化反応討論会
    • Place of Presentation
      大阪大学銀杏会館
    • Year and Date
      2011-11-05
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] Programmed Hemoprotein Assemblies on Metal Surfaces2011

    • Author(s)
      Akira Onoda, Yuichi Ueya, Yasuaki Kakikura, Tomoki Himiyama, Takashi Hayashi
    • Organizer
      3rd Asian Conference on Coordination Chemistry (ACCC-3)
    • Place of Presentation
      岡山理科大学
    • Year and Date
      2011-10-17
    • Related Report
      2010 Annual Research Report
  • [Presentation] シトクロムcを用いた鉄ヒドロゲナーゼ活性中心モデルの構築2011

    • Author(s)
      佐野洋平・小野田晃・林高史
    • Organizer
      第61回錯体化学討論会
    • Place of Presentation
      岡山理科大学
    • Year and Date
      2011-09-18
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] 鉄ヒドロゲナーゼシステムを指向した人工金属酵素の調製および分子間2011

    • Author(s)
      佐野洋平・小野田晃・林高史
    • Organizer
      分子内電子移動を利用した可視光駆動型水素発生反応、第38回生体分子科学討論会
    • Place of Presentation
      筑波大学筑波キャンパス
    • Year and Date
      2011-06-23
    • Related Report
      2010 Final Research Report
  • [Presentation] 鉄ヒドロゲナーゼシステムを指向した人工金属酵素の調製および分子間・分子内電子移動を利用した可視光駆動型水素発生反応2011

    • Author(s)
      佐野洋平、小野田晃、林高史
    • Organizer
      第38回生体分子科学討論会
    • Place of Presentation
      筑波大学筑波キャンパス
    • Year and Date
      2011-06-23
    • Related Report
      2010 Annual Research Report
  • [Presentation] ヒドロゲナーゼモデルシステムをめざした鉄カルボニルクラスター含有タンパク質の調製および光化学水素発生反応の検討2011

    • Author(s)
      佐野洋平・小野田晃・林高史
    • Organizer
      第21回金属の関与する生体関連反応シンポジウム
    • Place of Presentation
      葉大学西千葉キャンパス
    • Year and Date
      2011-05-31
    • Related Report
      2010 Final Research Report
  • [Presentation] ヒドロゲナーゼモデルシステムをめざした鉄カルボニルクラスター含有タンパク質の調製および光化学水素発生反応の検討2011

    • Author(s)
      佐野洋平、小野田晃、林高史
    • Organizer
      第21回金属の関与する生体関連反応シンポジウム
    • Place of Presentation
      千葉大学西千葉キャンパス
    • Year and Date
      2011-05-31
    • Related Report
      2010 Annual Research Report
  • [Presentation] アポニトロフォリン内部空間への共有結合を介したロジウム錯体の導入2011

    • Author(s)
      福本和貴・小野田晃・林高史
    • Organizer
      日本化学会第91春季年会
    • Place of Presentation
      神奈川大学
    • Year and Date
      2011-03-29
    • Related Report
      2010 Final Research Report
  • [Presentation] アポニトロフォリン内部空間への共有結合を介したロジウム錯体の導入2011

    • Author(s)
      福本和貴・小野田晃・林高史
    • Organizer
      日本化学会第91春季年会
    • Place of Presentation
      横浜市
    • Year and Date
      2011-03-29
    • Related Report
      2010 Annual Research Report
  • [Presentation] ヒドロゲナーゼモデルを指向した鉄カルボニルクラスター含有タンパク質の調製と水中における水素発生反応の触媒機能2011

    • Author(s)
      佐野洋平.小野田晃.林高史
    • Organizer
      日本化学会第91春季年会
    • Place of Presentation
      神奈川大学
    • Year and Date
      2011-03-28
    • Related Report
      2010 Final Research Report
  • [Presentation] ヒドロゲナーゼモデルを指向した鉄カルボニルクラスター含有タンパク質の調製と水中における水素発生反応の触媒機能2011

    • Author(s)
      佐野洋平・小野田晃・林高史
    • Organizer
      日本化学会第91春季年会
    • Place of Presentation
      横浜市
    • Year and Date
      2011-03-28
    • Related Report
      2010 Annual Research Report
  • [Presentation] Artificial Metalloenzyme Constructed by a Covalently-linked Rhodium(I) Complex wihtin a Protein Matrix、Pacifichem20102010

    • Author(s)
      福本和喜・小野田晃・林高史
    • Organizer
      Molecular Design in Bioinorganic Chemistry# 173
    • Place of Presentation
      ホノルル
    • Year and Date
      2010-12-19
    • Related Report
      2010 Final Research Report
  • [Presentation] Functional Characteristics of Hemerythrin-like Domain from the Prespective of its Large Substrate Tunnel、Pacifichem20102010

    • Author(s)
      岡本泰典・小野田晃・林高史
    • Organizer
      Molecular Design in Bioinorganic Chemistry# 173
    • Place of Presentation
      ホノルル
    • Year and Date
      2010-12-19
    • Related Report
      2010 Final Research Report
  • [Presentation] Functional Characteristics of Hemerythrin-like Domain from the Prespective of its Large Substrate Tunnel2010

    • Author(s)
      Yasunori Okamoto, Akira Onoda, Takashi Hayashi
    • Organizer
      Pacifichem 2010, Molecular Design in Bioinorganic Chemistry #173
    • Place of Presentation
      Honolulu, HI (USA)
    • Year and Date
      2010-12-19
    • Related Report
      2010 Annual Research Report
  • [Presentation] Artificial Metalloenzyme Constructed by a Covalently-linked Rhodium(I) Complex wihtin a Protein Matrix2010

    • Author(s)
      Katsuki Fukumoto, Akira Onoda, Takashi Hayashi
    • Organizer
      Pacifichem 2010 Molecular Design in Bioinorganic Chemistry #173
    • Place of Presentation
      Honolulu, HI, (USA)
    • Year and Date
      2010-12-19
    • Related Report
      2010 Annual Research Report
  • [Presentation] ヘムエリスリン様タンパク質内部の疎水性空孔近傍に位置する鉄二核中心の構造と反応性2010

    • Author(s)
      岡本泰典・小野田晃・杉本宏・城宜嗣・林高史
    • Organizer
      第60回錯体化学討論会
    • Place of Presentation
      大阪国際交流センター
    • Year and Date
      2010-09-28
    • Related Report
      2010 Annual Research Report 2010 Final Research Report 2009 Annual Research Report
  • [Presentation] 鉄二核中心を有するヘムエリスリン様タンパク質の機能解析2010

    • Author(s)
      小野田晃・佐野洋平・岡本泰典・福本和貴・林高史
    • Organizer
      第4回バイオ関連化学シンポジウム
    • Place of Presentation
      大阪大学豊中キャンパス
    • Year and Date
      2010-09-24
    • Related Report
      2010 Final Research Report
  • [Presentation] 非天然金属中心を導入した人工タンパク質触媒の創製2010

    • Author(s)
      小野田晃・佐野洋平・岡本泰典・福本和貴・林高史
    • Organizer
      第4回バイオ関連化学シンポジウム
    • Place of Presentation
      大阪大学豊中キャンパス
    • Year and Date
      2010-09-24
    • Related Report
      2010 Annual Research Report 2009 Annual Research Report
  • [Presentation] Characteristics of Diiron Site nearby Substrate Tunnel in Hemerythrin-like Domain of DcrH : Stable Mixed-Valent State and Dioxygen Binding Kinetics2010

    • Author(s)
      小野田晃
    • Organizer
      第2回阪大GCOE・ストラスブール大学シンポジウム
    • Place of Presentation
      ストラスブール大学、フランス
    • Year and Date
      2010-07-01
    • Related Report
      2010 Annual Research Report 2010 Final Research Report 2009 Annual Research Report
  • [Presentation] システイン含有金属結合タンパク質を用いた多核金属クラスターの構築2009

    • Author(s)
      佐野洋平・小野田晃・林高史
    • Organizer
      第59回錯体化学討論会
    • Place of Presentation
      長崎大学文教キャンパス
    • Year and Date
      2009-09-25
    • Related Report
      2010 Final Research Report 2009 Annual Research Report
  • [Presentation] 鉄二核中心を有するヘムエリスリン類縁タンパク質の調製とその機能改変2009

    • Author(s)
      小野田晃・岡本泰典・林高史
    • Organizer
      第59回錯体化学討論会
    • Place of Presentation
      長崎大学文教キャンパス
    • Year and Date
      2009-09-25
    • Related Report
      2010 Final Research Report 2009 Annual Research Report
  • [Presentation] Artificial Diiron Center in Dioxygen-binding Protein2009

    • Author(s)
      岡本泰典・小野田晃・林高史
    • Organizer
      第14回国際生物無機化学会議(ICBIC 14)
    • Place of Presentation
      名古屋国際会議場
    • Year and Date
      2009-07-27
    • Related Report
      2010 Final Research Report
  • [Presentation] Novel Protein Catalysts Containing multinuclear Metal Cluster2009

    • Author(s)
      佐野洋平・櫻井利恵・小野田晃・林高史
    • Organizer
      第14回国際生物無機化学会議(ICBI C14)
    • Place of Presentation
      名古屋国際会議場
    • Year and Date
      2009-07-27
    • Related Report
      2010 Final Research Report
  • [Presentation] Novel Protein Catalysts Containing multinuclear Metal Cluster2009

    • Author(s)
      佐野洋平・櫻井利恵・小野田晃・林高史
    • Organizer
      第14回国際生物無機化学会議(ICBIC14)
    • Place of Presentation
      名古屋国際会議場
    • Year and Date
      2009-07-27
    • Related Report
      2009 Annual Research Report
  • [Presentation] Artificial Diiron Center in Dioxygen-binding Protein2009

    • Author(s)
      岡本泰典・小野田晃・林高史
    • Organizer
      第14回国際生物無機化学会議(ICBIC14)
    • Place of Presentation
      名古屋国際会議場
    • Year and Date
      2009-07-27
    • Related Report
      2009 Annual Research Report
  • [Remarks]

    • URL

      http://www.chem.eng.osaka-u.ac.jp/~hayashiken/

    • Related Report
      2010 Final Research Report
  • [Remarks]

    • URL

      http://www.chem.eng.osaka-u.ac.jp/~hayashiken/

    • Related Report
      2010 Annual Research Report
  • [Patent(Industrial Property Rights)] 複数の金属ナノ粒子とヘムタンパク質2量体由来のアポタンパク質との複合体2010

    • Inventor(s)
      林高史、小野田晃、植屋佑一
    • Industrial Property Rights Holder
      大阪大学
    • Filing Date
      2010-09-10
    • Related Report
      2010 Final Research Report
    • Overseas
  • [Patent(Industrial Property Rights)] ヘムタンパク質ポリマーが架橋された構造体2010

    • Inventor(s)
      林高史、大洞光司、小野田晃
    • Industrial Property Rights Holder
      大阪大学
    • Filing Date
      2010-09-09
    • Related Report
      2010 Final Research Report
    • Overseas
  • [Patent(Industrial Property Rights)] ヘムタンパク質ポリマーが架橋された構造体2010

    • Inventor(s)
      林高史、大洞光司、小野田晃
    • Industrial Property Rights Holder
      大阪大学
    • Industrial Property Number
      2009-208054
    • Filing Date
      2010-09-09
    • Related Report
      2010 Final Research Report
  • [Patent(Industrial Property Rights)] ヘムタンパク質ポリマーが架橋された構造体2010

    • Inventor(s)
      林高史、大洞光司、小野田晃
    • Industrial Property Rights Holder
      大阪大学
    • Filing Date
      2010-09-09
    • Related Report
      2010 Annual Research Report
    • Overseas
  • [Patent(Industrial Property Rights)] 複数の金属ナノ粒子とヘムタンパク質2量体由来のアポタンパク質との複合体2010

    • Inventor(s)
      林高史、小野田晃、植屋佑一
    • Industrial Property Rights Holder
      大阪大学
    • Filing Date
      2010-09-09
    • Related Report
      2010 Annual Research Report
    • Overseas
  • [Patent(Industrial Property Rights)] 複数の金属ナノ粒子とヘムタンパク質2量体由来のアポタンパク質との複合体2009

    • Inventor(s)
      林高史、小野田晃、植屋佑一
    • Industrial Property Rights Holder
      大阪大学
    • Industrial Property Number
      2010-054960
    • Filing Date
      2009-09-09
    • Related Report
      2010 Final Research Report
  • [Patent(Industrial Property Rights)] 酸素吸蔵機能を有する1次元・2次元ヘムタンパク質超分子なの構造体の構築2009

    • Inventor(s)
      林高史、北岸宏亮、大洞光司、小野田晃、柿倉泰明
    • Industrial Property Rights Holder
      大阪大学
    • Filing Date
      2009-03-10
    • Related Report
      2010 Final Research Report
    • Overseas
  • [Patent(Industrial Property Rights)] 酸素吸蔵機能を有する1次元・2次元ヘムタンパク質超分子なの構造体の構築2008

    • Inventor(s)
      林高史、北岸宏亮、大洞光司、小野田晃、柿倉泰明
    • Industrial Property Rights Holder
      大阪大学
    • Industrial Property Number
      2008-061373
    • Filing Date
      2008-03-11
    • Related Report
      2010 Final Research Report
    • Overseas

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Published: 2008-04-01   Modified: 2016-11-18  

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