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Study on the structure and function of glucosidases acting on glycochains

Research Project

Project/Area Number 20570103
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Structural biochemistry
Research InstitutionTokyo University of Agriculture and Technology

Principal Investigator

TONOZUKA Takashi  Tokyo University of Agriculture and Technology, 大学院・農学研究院, 准教授 (50285194)

Co-Investigator(Renkei-kenkyūsha) NISHIKWA Atsushi  東京農工大学, 大学院・農学研究院, 教授 (30218127)
Project Period (FY) 2008 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2010: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2009: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2008: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
KeywordsX線結晶解析 / 糖タンパク質糖鎖 / グルコシダーゼ / X線結晶構造析 / 大腸菌 / オリゴ糖 / マンノシダーゼ / X線結晶構造解析 / 黒麹菌
Research Abstract

The purpose of this research was to elucidate the structure-function relationship of alpha-glucosidases and related enzymes, which act on the N-linked oligosaccharides. This research also investigated the relationship between the N-linked oligosaccharides and the protein structure. The three-dimensional structure of an enzyme homologous to processing alpha-glucosidase I has been determined, and the enzyme was shown to be useful for producing oligosaccharides. The expression system of a fungal processing alpha-glucosidase I was constructed, and the enzymatic properties were determined. We also investigated some enzymatic properties of a bacterial enzyme homologous to endo-alpha-1,2-mannosidase, an enzyme potentially physiologically related to processing alpha-glucosidases. This was the first report on the enzymatic characterization of a bacterial endo-alpha-1,2-mannosidase.

Report

(4 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • 2008 Annual Research Report
  • Research Products

    (17 results)

All 2011 2010 2009 2008 Other

All Journal Article (6 results) (of which Peer Reviewed: 6 results) Presentation (10 results) Remarks (1 results)

  • [Journal Article] Heterologous expression, purification, and characterization of an a -mannosidase belonging to glycoside hydrolase family 99 from Shewanella amazonensis2011

    • Author(s)
      Matsuda, K., Kurakata, Y., Miyazaki, T., Matsuo, I., Ito, Y., Nishikawa, A., Tonozuka, T.
    • Journal Title

      Biosci.Biotechnol.Blochem. 75

      Pages: 797-799

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Structural similarity between a starch-hydrolyzing enzyme and an N-glycan-hydrolyzing enzyme : exohydrolases cleaving a-1, X-glucosidic linkages to produce a -glucose2011

    • Author(s)
      Tonozuka, T., Miyazaki, T., Nishikawa A.
    • Journal Title

      Trends Glycosci.Glycotechnol 23

      Pages: 93-102

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Heterologous Expression, Purification, and Characterization of an α-Mannosidase Belonging to Glycoside Hydrolase Family 99 from Shewanella amazonensis2011

    • Author(s)
      Kana Matsuda, Takashi Tonozuka, ら計7名
    • Journal Title

      Bioscience, Biotechnology, and Biochemistry

      Volume: 75 Pages: 797-799

    • NAID

      10028272004

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Structural Similarity between a Starch-hydrolyzing Enzyme and an N-Glycan-Hydrolyzing Enzyme : Exohydrolases Cleaving α-1, X-Glucosidic Linkages to Produce β-Glucose2011

    • Author(s)
      Takashi Tonozuka, Takatsugu Miyazaki, Atsushi Nishikawa
    • Journal Title

      Trends in Glycoscience and Glycotechnology

      Volume: 23 Pages: 93-102

    • NAID

      10029582762

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Structural insights into the substrate specificity and function of Escherichia coli K12 YgjK, a glucosidase belonging to the glycoside hydrolase family 63.2008

    • Author(s)
      Kurakata, Y., Uechi, A., Yoshida, H., Kamitori, S., Sakano, Y., Nishikawa, A., Tonozuka, T.
    • Journal Title

      JMol Biol. 381

      Pages: 116-128

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Structural insights into the substrate specificity and function ofEscherichia coli K12 YgjK, a glucosidase belonging to theglvcoside hydrolase family 632008

    • Author(s)
      Yuma Kurakata, TakashiTonozuka ら計7名
    • Journal Title

      Journal of Molecular Biology 381

      Pages: 116-128

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Presentation] Shewanella amazonenszs 由来 GH99 αMannosidase の発現系の構築と性質の解析2011

    • Author(s)
      松田佳奈、倉方悠馬、宮崎剛亜、松尾一郎、伊藤幸成、西河淳、殿塚隆史
    • Organizer
      日本農芸化学会
    • Place of Presentation
      京都(京都女子大学)
    • Year and Date
      2011-03-27
    • Related Report
      2010 Final Research Report
  • [Presentation] Shewanella amazonensis由来GH99 α-Mannosidaseの発現系の構築と性質の解析2011

    • Author(s)
      松由佳奈、殿塚隆史, ら計7名
    • Organizer
      日本農芸化学会
    • Place of Presentation
      京都(京都女子大学)
    • Year and Date
      2011-03-27
    • Related Report
      2010 Annual Research Report
  • [Presentation] 機能未知酵素を用いた新規な糖の創出2010

    • Author(s)
      殿塚隆史
    • Organizer
      アグリビジネス創出フェア
    • Place of Presentation
      千葉(幕張メッセ)
    • Year and Date
      2010-11-26
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] Molecular cloning and heterologous production of Aspergillus Niger processing a -glucosidase I2010

    • Author(s)
      宮崎剛亜, 松本雄治, 武田陽一, 松尾一郎, 伊藤幸成, 西河淳, 殿塚隆史
    • Organizer
      Plant Polysaccharide and Applied Glvcoscience Workshop2010
    • Place of Presentation
      東京(笹川記念会館)
    • Related Report
      2010 Final Research Report
  • [Presentation] Molecular cloning and heterologous production of Aspergillus niger processing α-glucosidase I2010

    • Author(s)
      Takatsugu Miyazaki, Takashi Tbnozuka, ら計7名
    • Organizer
      Plant Polysaccharide and Applied Glycoscience Workshop
    • Place of Presentation
      東京(笹川記念会館)
    • Related Report
      2010 Annual Research Report
  • [Presentation] イソプルラナーゼの活性中心近傍に存在する残基Tyr440の役割の解明2009

    • Author(s)
      宮崎剛亜、矢代浩之、西河淳、殿塚隆史
    • Organizer
      日本応用糖質科学会
    • Place of Presentation
      弘前(弘前大学文京町キャンパス)
    • Year and Date
      2009-09-16
    • Related Report
      2010 Final Research Report
  • [Presentation] イソプルラナーゼの活性中心近傍に存在するTyr440の役割の解明2009

    • Author(s)
      宮崎剛亜、殿塚隆史, ら計4名
    • Organizer
      日本応用糖質科学会
    • Place of Presentation
      弘前大学文京町キャンパス
    • Year and Date
      2009-09-16
    • Related Report
      2009 Annual Research Report
  • [Presentation] Glycoside Hydrolase Family 63に属する二種類の酵素の機能解析2009

    • Author(s)
      倉方悠馬、松本雄治、武田陽一、松尾一郎、伊藤幸成、西河淳、殿塚隆史
    • Organizer
      日本農芸化学会
    • Place of Presentation
      福岡(マリンメッセ福岡)
    • Year and Date
      2009-03-28
    • Related Report
      2010 Final Research Report
  • [Presentation] Glvcoside Hydrolase Family 63 に属する二種類の酵素の機能解析2009

    • Author(s)
      倉方悠馬, 殿塚隆史ら計7名
    • Organizer
      日本農芸化学会
    • Place of Presentation
      福岡(マリンメツセ福岡)
    • Year and Date
      2009-03-28
    • Related Report
      2008 Annual Research Report
  • [Presentation] Structure and function of Escherichia coli YgjK, a glucosidase belonging to the glycoside hydrolase family 63, and a comparison with related enzymes2009

    • Author(s)
      倉方悠馬, 松本雄治, 伊藤幸成, 西河淳, 殿塚隆史
    • Organizer
      8th Carbohydrate Bioengineering Meeting
    • Place of Presentation
      Ischia, Naples, Italy
    • Related Report
      2010 Final Research Report
  • [Remarks] ホームページ等

    • URL

      http://www.tuat.ac.jp/-seika/tonozuka/

    • Related Report
      2010 Final Research Report

URL: 

Published: 2008-04-01   Modified: 2016-04-21  

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