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Elucidation of protein architecture and molecular evolution of microbial antifreeze proteins

Research Project

Project/Area Number 20570118
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Structural biochemistry
Research InstitutionNational Institute of Advanced Industrial Science and Technology

Principal Investigator

KONDO Hidemasa  National Institute of Advanced Industrial Science and Technology, 生物プロセス研究部門, 主任研究員 (80357045)

Co-Investigator(Kenkyū-buntansha) NISHIMIYA Yoshiyuki  独立行政法人産業技術総合研究所, 生物プロセス研究部門, 主任研究員 (00357716)
TSUDA Sakae  独立行政法人産業技術総合研究所, 生物プロセス研究部門, 研究グループ長 (70211381)
HOSHINO Tamotsu  独立行政法人産業技術総合研究所, 生物プロセス研究部門, 研究グループ長 (60357944)
Project Period (FY) 2008 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2010: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2009: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2008: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
KeywordsX線結晶構造解析 / 不凍タンパク質 / 生物物理 / 微生物 / 極限微生物 / 氷結晶 / 低温生物学 / 環境適応
Research Abstract

Antifreeze proteins bind preferentially to the surfaces of embryonic ice crystals and inhibit further growth of ice. In the present study we analyzed three-dimensional structures of microbial antifreeze proteins and revealed their possible ice-binding site by structure-based site-directed mutagenesis. Antifreeze activities measured for various kinds of microbial antifreeze proteins exhibited wide diversity both in thermal hysteresis value and ice crystal shape, in spite of their high sequence homologies. From these observations it is suggested that microbial antifreeze proteins share a common structural scaffold for their interaction with ice and adopt their own antifreeze activities according to their growing environment.

Report

(4 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • 2008 Annual Research Report
  • Research Products

    (27 results)

All 2010 2009 2008

All Journal Article (6 results) (of which Peer Reviewed: 4 results) Presentation (21 results)

  • [Journal Article] Comparison of functional properties of two fungal antifreeze proteins from Antarctomyces psychrotrophicus and Typhula ishikariensis2010

    • Author(s)
      肖楠、鈴木啓太、西宮佳志、近藤英昌、三浦愛、津田栄、星野保
    • Journal Title

      FEBS Journal 227

      Pages: 394-403

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Antifreezing activities of various fungi and pseudofungi isolated from Antarctica2010

    • Author(s)
      肖楠、稲葉重樹、東條元昭、出川洋介、藤生誠一、花田祐一、工藤栄、星野保
    • Journal Title

      North American Fungi 5

      Pages: 215-220

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Comparison of functional properties of two fungal antifreeze proteins from Antarctomyces psychrotrophicus and Typhula ishikariensis2009

    • Author(s)
      Nan Xiao
    • Journal Title

      FEBS Journal 277

      Pages: 394-403

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Cold adaptation in phytopathogemnic fungi causing snow mold2009

    • Author(s)
      Tamotsu Hoshino
    • Journal Title

      Mycoscience 50

      Pages: 26-38

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Crystal structure of an antifreeze protein from snow mold fungi2008

    • Author(s)
      近藤英昌、杉本宏、野呂奈津子、肖楠、花田祐一、星野保、津田栄
    • Journal Title

      Acta Crystallographica Section A 64

    • Related Report
      2010 Final Research Report
  • [Journal Article] Crystal structure of an antifreeze protein from snow mold fungi2008

    • Author(s)
      Hidemasa Kondo
    • Journal Title

      Acta Crystallographica Sectioni A 64

    • Related Report
      2008 Annual Research Report
  • [Presentation] Expression and characterization of recombinant antifreeze proteins from cold-adapted microorganisms2010

    • Author(s)
      花田祐一、近藤英昌、肖楠、西宮佳志、星野保、三浦愛、津田栄
    • Organizer
      第32回極域生物シンポジウム
    • Place of Presentation
      国立極地研究所(東京都)
    • Year and Date
      2010-11-30
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] Antifreeze activities of fungi and sea ice diatoms from Antarctica2010

    • Author(s)
      肖楠、花田祐一、Sushruta Hakkimane、西宮佳志、近藤英昌、津田栄、星野保
    • Organizer
      第32回極域生物シンポジウム
    • Place of Presentation
      国立極地研究所(東京都)
    • Year and Date
      2010-11-30
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] 南極海氷細菌Colwellia sp.由来不凍タンパク質の不凍機能の解析2010

    • Author(s)
      花田祐一、近藤英昌、肖楠、西宮佳志、星野保、三浦愛、津田栄
    • Organizer
      第11回極限環境生物学会
    • Place of Presentation
      京都大学(京都府宇治市)
    • Year and Date
      2010-11-16
    • Related Report
      2010 Final Research Report
  • [Presentation] 南極海氷細菌Colwellia sp.由来不凍タンパク質の不凍機能の解析2010

    • Author(s)
      花田祐一
    • Organizer
      第11回極限環境生物学会
    • Place of Presentation
      京都大学宇治キャンパス(京都府)
    • Year and Date
      2010-11-16
    • Related Report
      2010 Annual Research Report
  • [Presentation] CRYSTAL Structure of antifreeze protein from a snow mold fungus2010

    • Author(s)
      近藤英昌、杉本宏、花田祐一、肖楠、関玄彦、星野保、三浦愛、津田栄
    • Organizer
      The 12th International Conference on the Physics and Chemistry of Ice
    • Place of Presentation
      北海道大学(札幌市)
    • Year and Date
      2010-09-09
    • Related Report
      2010 Final Research Report
  • [Presentation] CRYSTAL STRUCTURE OF ANTIFREEZE PROTEIN FROM A SNOW MOLD FUNGUS2010

    • Author(s)
      近藤英昌
    • Organizer
      The 12th International Conference on the Physics and Chemistry of Ice
    • Place of Presentation
      北海道大学学術交流会館(札幌市)
    • Year and Date
      2010-09-09
    • Related Report
      2010 Annual Research Report
  • [Presentation] 好冷性担子菌不凍タンパク質アイソフォームの活性解析2010

    • Author(s)
      関玄彦、肖楠、花田祐一、近藤英昌、星野保、三浦愛、津田栄
    • Organizer
      第55回低温生物工学会大会
    • Place of Presentation
      東京工業大学(東京都)
    • Year and Date
      2010-06-26
    • Related Report
      2010 Final Research Report
  • [Presentation] 好冷性担子菌不凍タンパク質アイソフォームの活性解析2010

    • Author(s)
      関玄彦
    • Organizer
      第55回低温生物工学会大会
    • Place of Presentation
      東京工業大学大岡山キャンパス(東京都)
    • Year and Date
      2010-06-26
    • Related Report
      2010 Annual Research Report
  • [Presentation] 好冷性担子菌不凍タンパク質の結晶構造解析2010

    • Author(s)
      近藤英昌、花田祐一、肖楠、関玄彦、杉本宏、星野保、三浦愛、津田栄
    • Organizer
      第10回日本蛋白質科学会年会
    • Place of Presentation
      札幌コンベンションセンター(札幌市)
    • Year and Date
      2010-06-17
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] 好冷性担子菌不凍タンパク質アイソフォームの活性の解析2010

    • Author(s)
      関玄彦、肖楠、花田祐一、近藤英昌、星野保、三浦愛、津田栄
    • Organizer
      第10回日本蛋白質科学会年会
    • Place of Presentation
      札幌コンベンションセンター(札幌市)
    • Year and Date
      2010-06-16
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] 好冷性担子菌イシカリガマホタケ由来不凍タンパク質のアイソフォームの不凍活性の解析2009

    • Author(s)
      関玄彦、肖楠、花田祐一、近藤英昌、星野保、三浦愛、津田栄
    • Organizer
      第10回極限環境微生物学会年会
    • Place of Presentation
      明治大学(東京都)
    • Year and Date
      2009-10-29
    • Related Report
      2010 Final Research Report
  • [Presentation] 菌類・珪藻類由来不凍タンパク質の発現系構築と氷結晶結合機能の解析2009

    • Author(s)
      花田祐一、近藤英昌、西宮佳志、星野保、三浦愛、津田栄
    • Organizer
      第10回極限環境微生物学会年会
    • Place of Presentation
      明治大学(東京都)
    • Year and Date
      2009-10-29
    • Related Report
      2010 Final Research Report
  • [Presentation] 菌類・珪藻類由来不凍タンパク質の発現系構築と水結晶結合機能の解析2009

    • Author(s)
      花田祐一
    • Organizer
      極限環境微生物学会
    • Place of Presentation
      明治大学駿河台キャンパス(東京都)
    • Year and Date
      2009-10-29
    • Related Report
      2009 Annual Research Report
  • [Presentation] 好冷性担子菌イシカリガマホタケ由来不凍タンパク質のアイソフォームの不凍活性の解析2009

    • Author(s)
      関玄彦
    • Organizer
      極限環境微生物学会
    • Place of Presentation
      明治大学駿河台キャンパス(東京都)
    • Year and Date
      2009-10-29
    • Related Report
      2009 Annual Research Report
  • [Presentation] Discovery of novel antifreeze proteins from Antarctic ascomycetes2009

    • Author(s)
      Nan Xiao
    • Organizer
      Xth SCAR International Biology Symposium 2009
    • Place of Presentation
      北海道大学学術交流会館(札幌市)
    • Year and Date
      2009-07-27
    • Related Report
      2009 Annual Research Report
  • [Presentation] 東南極宗谷海岸露岩地域陸上生態系における菌類の多様性と環境適応2008

    • Author(s)
      星野保
    • Organizer
      平成20年度極域気水圏・生物圏合同シンポジウム
    • Place of Presentation
      国立極地研究所(東京)
    • Year and Date
      2008-12-04
    • Related Report
      2008 Annual Research Report
  • [Presentation] Crystal structure of an antifreeze protein from snow mold fungi2008

    • Author(s)
      近藤英昌、杉本宏、野呂奈津子、肖楠、花田祐一、星野保、津田栄
    • Organizer
      XXI Congress of the International Union of Crystallography
    • Place of Presentation
      大阪国際会議場(大阪市)
    • Year and Date
      2008-08-24
    • Related Report
      2010 Final Research Report
  • [Presentation] Crystal structure of an antifreeze protein from snow mold fungi2008

    • Author(s)
      近藤英昌
    • Organizer
      XXI Congress of the International Union of Crystallography
    • Place of Presentation
      グランキューブ大阪(大阪市)
    • Year and Date
      2008-08-24
    • Related Report
      2008 Annual Research Report
  • [Presentation] Ecological strategies of snow molds against freezing stress2008

    • Author(s)
      星野保、齋藤泉、鈴木啓太、肖楠、近藤英昌、津田栄、東條元昭、寺見文弘
    • Organizer
      China-Japan Pan Asia Pacific Mycology Forum
    • Place of Presentation
      吉林農業大学(中華人民共和国長春市)
    • Year and Date
      2008-07-31
    • Related Report
      2010 Final Research Report
  • [Presentation] Discovery of novel antifreeze proteins from Antarctic ascomycetes2008

    • Author(s)
      Nan Xiao
    • Organizer
      China-Japan Pan Asia Pacific Mycology Forum
    • Place of Presentation
      長春(中国)
    • Year and Date
      2008-07-29
    • Related Report
      2008 Annual Research Report
  • [Presentation] Ecological strategies of snow molds against freezing stress2008

    • Author(s)
      Tamotsu Hoshino
    • Organizer
      China-Japan Pan Asia Pacific Mycology Forum
    • Place of Presentation
      長春(中国)
    • Year and Date
      2008-07-29
    • Related Report
      2008 Annual Research Report

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Published: 2008-04-01   Modified: 2016-04-21  

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