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Role of ligands for allosteric network of nuclear receptors

Research Project

Project/Area Number 20590108
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Drug development chemistry
Research InstitutionShowa Pharmaceutical University

Principal Investigator

YAMAMOTO Keiko  Showa Pharmaceutical University, 薬学部, 教授 (90147017)

Co-Investigator(Kenkyū-buntansha) YOSHIDA Yuki  昭和薬科大学, 薬学部, 助教 (00297045)
ITOH Toshimasa  昭和薬科大学, 薬学部, 助教 (80536110)
Project Period (FY) 2008 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2010: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2009: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2008: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
KeywordsビタミンD / ビタミンD受容体 / PPAR / 転写因子 / 結晶構造 / コンフォメーション変化 / シグナリング / 骨粗鬆症 / 核内受容体 / アゴニスト / アンタゴニスト / 結晶構造解析 / 高度不飽和脂肪酸 / PPAR_γ / リガンド / カルシウム / ホルモン / ガン
Research Abstract

Active vitamin D derivatives with 22-butyl substituent were found to be a new class of agonists and antagonists inducing the different pocket structure of the vitamin D receptor. Next, we synthesized vitamin D derivatives with 22-alkyl substituent and performed their SAR study. Then we tried X-ray crystallographic analysis of the complex of vitamin D receptor and ligand with particular activity. These results indicate that a ligand determines position of helix 12 via allosteric network and consequently expresses its particular activity.

Report

(4 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • 2008 Annual Research Report
  • Research Products

    (20 results)

All 2011 2010 2009

All Journal Article (10 results) (of which Peer Reviewed: 10 results) Presentation (10 results)

  • [Journal Article] Potent Antagonist for the Vitamin D Receptor : Vitamin D Analogues with Simple Side Chain Structure.2010

    • Author(s)
      Sakamaki Y, Inaba Y, Yoshimoto N, Yamamoto K.
    • Journal Title

      J.Med.Chem. 53

      Pages: 5813-5826

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Flexible Ligand Recognition of Peroxisome Proliferator-Activated Receptor-γ (PPARγ).2010

    • Author(s)
      Yamagishi K, Yamamoto K, Mochizuki Y, Nakano T, Yamada S, Tokiwa H.
    • Journal Title

      Bioorg Med Chem.Lett. 20

      Pages: 3344-3347

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] 22S-Butyl-1α, 24R-dihydroxyvitamin D3 : Recovery of vitamin D receptor agonistic activity.2010

    • Author(s)
      Inaba Y, Nakabayashi M, Itoh T, Yoshimoto N, Ikura T, Ito N, Shimizu M, Yamamoto K.
    • Journal Title

      J.Steroid Biochem.Mol.Biol. 121

      Pages: 146-150

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Synthesis of oxidized fatty acid derivatives via an iodolactonization reaction.2010

    • Author(s)
      Itoh T, Yoshimoto N, Yamamoto K.
    • Journal Title

      Heterocycles. 80

      Pages: 689-695

    • NAID

      40016900141

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] 22S-Buty1-1α, 24R-dihydroxyvitamin D_3 : Recovery of vitamin D receptor agonistic activity2010

    • Author(s)
      Yuka Inaba
    • Journal Title

      Journal of Steroid Biochemistry and Molecular Biology

      Volume: 121 Pages: 146-150

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Potent Antagonist for the Vitamin D Receptor : Vitamin D Analogues with Simple Side Chain Structure2010

    • Author(s)
      Yuta Sakamaki
    • Journal Title

      Journal of Medicinal. Chemistry

      Volume: 53 Pages: 5813-5826

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Synthesis of oxidized fatty acid derivatives via an iodolactonization reaction2010

    • Author(s)
      Toshimasa Itoh
    • Journal Title

      Heterocycles 80

      Pages: 689-695

    • NAID

      40016900141

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A New Class of Vitamin D Analogues that Induce Structural Rearrangement of the Ligand-Binding Pocket of the Receptor.2009

    • Author(s)
      Inaba Y, Yoshimoto N, Sakamaki Y, Nakabayashi M, Ikura T, Tamamura H, Ito N, Shimizu M, Yamamoto K.
    • Journal Title

      J.Med.Chem. 52

      Pages: 1438-1449

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Activation of Testicular Orphan Receptor 4 by Fatty Acids.2009

    • Author(s)
      Tsai N-P, Huq M, Gupta P, Yamamoto K, Kagechika H, Wei L-N.
    • Journal Title

      Biochim.Biophys.Acta, Gene Regul.Mech. 1789

      Pages: 734-740

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] A New Class of Vitamin D Analogues that Induce Structural Rearrang ement of the Ligand-Binding Pocket of the Receptor2009

    • Author(s)
      Yuka Inaba
    • Journal Title

      Journal of Medicinal Chemistry 52

      Pages: 1438-1449

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Presentation] 22-ブチルビタミンD誘導体の作用発現機構に関する構造生物学的研究2011

    • Author(s)
      吉本暢子、酒巻雄太、稲葉有香、伊藤俊将、中林誠、伊藤暢聡、山本恵子
    • Organizer
      日本薬学会第131年会
    • Place of Presentation
      (要旨集上にて発表)
    • Year and Date
      2011-03-05
    • Related Report
      2010 Final Research Report
  • [Presentation] 3つのオキソ型脂肪酸のPPARγへの結合様式の比較2011

    • Author(s)
      伊藤俊将,吉本暢子,山本恵子
    • Organizer
      日本薬学会第131年会
    • Place of Presentation
      (要旨集上にて発表)
    • Year and Date
      2011-03-05
    • Related Report
      2010 Final Research Report
  • [Presentation] 酸化型脂肪酸とPPAR_YのX-線結晶構造解析2010

    • Author(s)
      伊藤俊将、山本恵子
    • Organizer
      第54回日本薬学会関東支部大会
    • Place of Presentation
      八王子市・東京薬科大学
    • Year and Date
      2010-10-02
    • Related Report
      2010 Annual Research Report
  • [Presentation] 22-アルキルビタミンD誘導体の合成と生物活性評価2010

    • Author(s)
      山本恵子,酒巻雄太,稲葉有香,吉本暢子
    • Organizer
      ビタミン学会第62回大会
    • Place of Presentation
      盛岡
    • Year and Date
      2010-06-11
    • Related Report
      2010 Final Research Report
  • [Presentation] 高度不飽和長鎖脂肪酸の簡便な合成法の確立2010

    • Author(s)
      伊藤俊将,稲葉有香,山口拓也,山本恵子
    • Organizer
      ビタミン学会第62回大会
    • Place of Presentation
      盛岡
    • Year and Date
      2010-06-11
    • Related Report
      2010 Final Research Report
  • [Presentation] 22-アルキルビタミンD誘導体の合成と生物活性評価2010

    • Author(s)
      山本恵子
    • Organizer
      ビタミン学会第62回大会
    • Place of Presentation
      盛岡市・いわて県民情報交流センター
    • Year and Date
      2010-06-11
    • Related Report
      2010 Annual Research Report
  • [Presentation] ビタミンD受容体-リガンド結合領域と新規アゴニストの複合体のX線結晶構造解析2010

    • Author(s)
      稲葉有香,伊藤俊将,酒巻雄太,吉本暢子,中林誠,伊倉貞吉,伊藤暢聡,清水正人,山本恵子
    • Organizer
      日本薬学会第130年会
    • Place of Presentation
      岡山
    • Year and Date
      2010-03-29
    • Related Report
      2010 Final Research Report
  • [Presentation] 1,24-Dihydroxyvitamin D3 Analogs with Branched 22-Butyl Group : Biological Activities and Interaction with the Vitamin D Receptor.2009

    • Author(s)
      Keiko Yamamoto, Yuka Inaba, Makoto Nakabayashi, Toshimasa Itoh, Masato Shimizu, Teikichi Ikura, Nobutoshi Ito
    • Organizer
      14th Workshop on Vitamin D.Brugge, Belgium.
    • Year and Date
      2009-10-08
    • Related Report
      2010 Final Research Report
  • [Presentation] 1α,24-DIHYDROXYVITAMIN D_3 ANALOGS WITH BRANCHED 22-BUTYL GROUP : BIOLOGICAL ACTIVITIES AND INTERACTION WITH THE VITAMIN D RECEPTOR2009

    • Author(s)
      Keiko Yamamoto
    • Organizer
      14th Workshop on Vitamin D
    • Place of Presentation
      ベルギー(ブルージュ)
    • Year and Date
      2009-10-08
    • Related Report
      2009 Annual Research Report
  • [Presentation] 22-ブチル活性型ビタミンD誘導体の生物活性と受容体複合体構造2009

    • Author(s)
      稲葉有香
    • Organizer
      日本薬学会第129年会
    • Place of Presentation
      京都(国立京都国際会館)
    • Year and Date
      2009-03-27
    • Related Report
      2008 Annual Research Report

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Published: 2008-04-01   Modified: 2016-04-21  

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