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Regulatory mechanisms of allelic exclusion by epigenetics and chromosome dynamics

Research Project

Project/Area Number 20590298
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field General medical chemistry
Research InstitutionKyoto University

Principal Investigator

AGATA Yasutoshi  Kyoto University, 医学研究科, 准教授 (60263141)

Project Period (FY) 2008 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2010: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2009: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2008: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Keywordsエピジェネティクス / クロマチン / 対立遺伝子排除 / 転写因子 / 遺伝子発現 / エピジェネテクス / 染色体ダイナミクス / 遺伝子再構成
Research Abstract

The E2A transcription factor binds directly to genetic regions in the TCRβ locus and induces rearrangement by increasing histone acetylation. We analyzed the contraction and decontraction status of the TCRβ locus by 3D-FISH and found that V and DJ regions come into the close proximity during the stage in which rearrangement normally occurs, but become separated away from each other during the stage in which further rearrangement is inhibited. We also found that E2A overexpression induces localization of the V and DJ regions into the close proximity even in the stage in which further rearrangement is inhibited, and finally induces the rearrangement. These results suggest that E2A has the ability of inducing rearrangement not only by epigenetic changes but also by chromosome dynamics including locus contraction.

Report

(4 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • 2008 Annual Research Report
  • Research Products

    (20 results)

All 2011 2010 2009 2008 Other

All Journal Article (8 results) (of which Peer Reviewed: 5 results) Presentation (11 results) Remarks (1 results)

  • [Journal Article] Regulation of TCR Vγ2 gene rearrangement by the helix-loop-helix protein, E2A.2011

    • Author(s)
      Nozaki M, Wakae K, Tamaki N, Sakamoto S, Ohnishi K, Uejima T, Minato N, Yanagihara I, Agata Y.
    • Journal Title

      Int Immunol.

      Volume: (In press)

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Claudin-4 induction by E-protein activity in later stages of CD4/8double-positive thymocytes to increase positive selection efficiency.2011

    • Author(s)
      Kawai Y, Hamazaki Y, Fujita H, Fujita A, Sato T, Furuse M, Fujimoto T, Jetten AM, Agata Y, Minato N.
    • Journal Title

      Proc Natl Acad Sci USA.

      Volume: 108 Pages: 4075-4080

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The NF90-NF45 complex functions as a negative regulator in the microRNA processing pathway.2009

    • Author(s)
      Sakamoto S, Aoki K, Higuchi T, Todaka H, Morisawa K, Tamaki N, Hatano E, Fukushima A, Taniguchi T, Agata Y.
    • Journal Title

      Mol.Cell.Biol. 29

      Pages: 3754-3769

    • NAID

      120001756537

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] 転写因子E2AとTCRβ遺伝子の対立遺伝子排除2009

    • Author(s)
      縣保年
    • Journal Title

      医学のあゆみ 228(11)

      Pages: 1126-1127

    • Related Report
      2010 Final Research Report
  • [Journal Article] The NF90-NF45 complex functions as a negative regulator in the microRNA processing pathway.2009

    • Author(s)
      Sakamoto S, Aoki K, Higuchi T, Todaka H, Morisawa K, Tamaki N, Hatano E, Fukushima A, Taniguchi T, Agata Y.
    • Journal Title

      Mol Cell Biol 29

      Pages: 3754-3769

    • NAID

      120001756537

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 転写因子E2AとTCRβ遺伝子の対立遺伝子排除2009

    • Author(s)
      縣保年
    • Journal Title

      医学のあゆみ 228

      Pages: 1126-1127

    • Related Report
      2008 Annual Research Report
  • [Journal Article] Regulation of histone H4 acetylation by transcription factor E2A in Ig gene conversion.2008

    • Author(s)
      Kitao, H., Kimura, M., Yamamoto, K., Seo, H., Namikoshi, K., Agata, Y., Ohta, K., Takata, M.
    • Journal Title

      Int.Immunol. 20

      Pages: 277-284

    • NAID

      10021239538

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] E2AはT細胞抗原受容体遺伝子の再構成と対立遺伝子排除を制御する2008

    • Author(s)
      縣保年
    • Journal Title

      細胞工学 27(3)

      Pages: 258-259

    • Related Report
      2010 Final Research Report
  • [Presentation] E2A negatively regulates TCR Vγ3 rearrangement via transcriptional repressor, Gfi-1.2010

    • Author(s)
      若江亨祥
    • Organizer
      第14回国際免疫学会
    • Place of Presentation
      神戸
    • Year and Date
      2010-08-26
    • Related Report
      2010 Final Research Report
  • [Presentation] Regulation of Vγ2 gene rearrangement by the helix-loop-helix protein, E2A.2010

    • Author(s)
      野崎昌俊
    • Organizer
      第14回国際免疫学会
    • Place of Presentation
      神戸
    • Year and Date
      2010-08-26
    • Related Report
      2010 Final Research Report
  • [Presentation] Regulation of Vγ2 gene rearrangement by the helix-loop-helixprotein, E2A.2010

    • Author(s)
      Nozaki M, Tamaki N, Sakamoto S, Yanagihara I, Agata Y
    • Organizer
      14^<th>International Congress of Immunology
    • Place of Presentation
      神戸市、日本
    • Year and Date
      2010-08-26
    • Related Report
      2010 Annual Research Report
  • [Presentation] E2A negatively regulates TCR Vγ3 rearrangement via transcriptional repressor, Gfi-1.2010

    • Author(s)
      Wakae K, Yamashita M, Nakayama T, Minato N, Agata Y
    • Organizer
      14^<th> International Congress of Immunology
    • Place of Presentation
      神戸市、日本
    • Year and Date
      2010-08-26
    • Related Report
      2010 Annual Research Report
  • [Presentation] bHLH転写因子E2AによるVγ2遺伝子再構成の制御機構2010

    • Author(s)
      野崎昌俊
    • Organizer
      第18回Kyoto T Cell Conference
    • Place of Presentation
      京都
    • Year and Date
      2010-06-04
    • Related Report
      2010 Final Research Report
  • [Presentation] bHLH転写因子E2AによるVγ2遺伝子再構成の制御機構2010

    • Author(s)
      野崎昌俊、柳原格、懸保年
    • Organizer
      Kyoto T Cell Conference
    • Place of Presentation
      京都市、日本
    • Year and Date
      2010-06-04
    • Related Report
      2010 Annual Research Report
  • [Presentation] E2A and CBP/p300 act in synergy to promote chromatin accessibility of the immunoglobulin κlocus in nonlymphoid cells.2010

    • Author(s)
      縣保年
    • Organizer
      Gene Expression & Signaling in the Immune System
    • Place of Presentation
      Cold Spring Harbor, USA
    • Year and Date
      2010-04-22
    • Related Report
      2010 Final Research Report
  • [Presentation] E2A and CBP/p300 act in synergy to promote chromatin accessibility of the immunoglobulin κ locus in nonlymphoid cells.2010

    • Author(s)
      Agata Y
    • Organizer
      Gene Expression & Signaling in the Immune System
    • Place of Presentation
      Cold Spring Harbor, USA
    • Year and Date
      2010-04-22
    • Related Report
      2010 Annual Research Report
  • [Presentation] Regulation of Allelic Exclusion at the TCRβLocus by the Helix-Loop-Helix Protein, E472009

    • Author(s)
      縣保年
    • Organizer
      Transcriptional Mechanisms of Early Lymphocyte Development
    • Place of Presentation
      La Jolla, USA
    • Year and Date
      2009-11-05
    • Related Report
      2010 Final Research Report
  • [Presentation] Regulation of Allelic Exclusion at the TCRβ Locus by the Helix-Loop-Helix Protein, E47.2009

    • Author(s)
      Agata Y, Sakamoto S, Tamaki N, Ikawa T, Masuda K, Kawamoto H, Murre C.
    • Organizer
      Transcriptional Mechanisms of Early Lymphocyte Development.
    • Place of Presentation
      La Jolla, USA
    • Related Report
      2009 Annual Research Report
  • [Presentation] Regulation of Allelic Exclusion at the TCRβLocus by the Helix-Loop-Helix Protein, E472008

    • Author(s)
      縣保年
    • Organizer
      Gene Expression & Signaling in the Immune System
    • Place of Presentation
      Cold Spring Harbor, USA
    • Year and Date
      2008-04-02
    • Related Report
      2010 Final Research Report
  • [Remarks] ホームページ等

    • URL

      http://www.imm.med.kyoto-u.ac.jp/index.html

    • Related Report
      2010 Final Research Report

URL: 

Published: 2008-04-01   Modified: 2016-04-21  

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