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Study of genetic function of the ascidian based on the forward and reverse genetic approaches

Research Project

Project/Area Number 20681019
Research Category

Grant-in-Aid for Young Scientists (A)

Allocation TypeSingle-year Grants
Research Field 基礎ゲノム科学
Research InstitutionUniversity of Tsukuba

Principal Investigator

SASAKURA Yasunori  University of Tsukuba, 大学院・生命環境科学研究科, 准教授 (10400649)

Project Period (FY) 2008 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥25,350,000 (Direct Cost: ¥19,500,000、Indirect Cost: ¥5,850,000)
Fiscal Year 2010: ¥7,410,000 (Direct Cost: ¥5,700,000、Indirect Cost: ¥1,710,000)
Fiscal Year 2009: ¥7,670,000 (Direct Cost: ¥5,900,000、Indirect Cost: ¥1,770,000)
Fiscal Year 2008: ¥10,270,000 (Direct Cost: ¥7,900,000、Indirect Cost: ¥2,370,000)
Keywords発生・分化 / ゲノム / 遺伝子 / 突然変異体 / トランスポゾン / カタユウレイボヤ / エンハンサートラップ / Minos / UAS-Gal4 / Sleeping Beauty / Kaede / 細胞周期 / Hox1 / 転移酵素 / 逆遺伝学 / 母性因子 / 遺伝子ターゲッティング / Cre-loxP / I-SceI
Research Abstract

This study was purposed to establish the methods for investigation of gene functions in the chordate Ciona intestinalis. It was shown that enhancer detection is an effective way to create insertional mutants. It was shown that Hox1 functions in the patterning of epidermis. As a reverse genetic approach, a novel method of targeted disruption of maternally expressed genes was established. Transgenic maker lines were established that express reporter genes in the tissue-specific manner. The neural tissue-specific lines were utilized to investigate how the larval central nervous system was remodeled to construct the adult nervous system during metamorphosis. A method to live-image the cell cycle progression was introduced, and by using this method mechanisms of the coordination between cell division and morphogenesis were shown. A new method of germline transformation in Ciona mediated by Sleeping Beauty transposon was established.

Report

(4 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • 2008 Annual Research Report
  • Research Products

    (33 results)

All 2011 2010 2009 2008 Other

All Journal Article (16 results) (of which Peer Reviewed: 16 results) Presentation (13 results) Remarks (4 results)

  • [Journal Article] Yasunori Sasakura, Ependymal cells of chordate larvae are stem-like cells that form the adult nervous system2011

    • Author(s)
      Takeo Horie, Ryoko Shinki, Yosuke Ogura, Takehiro G.Kusakabe, Nori Satoh
    • Journal Title

      Nature 469巻

      Pages: 525-528

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Coordination of mitosis and morphogenesis : role of a prolonged G2 phase during chordate neurulation2011

    • Author(s)
      Yosuke Ogura, Asako Sakaue-Sawano, Masashi Nakagawa, Nori Satoh, Atsushi Miyawaki, Yasunori Sasakura
    • Journal Title

      Development 138巻

      Pages: 577-587

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Coordination of mitosis and morphogenesis : role of a prolonged G2 phase during chordate neurulation.2011

    • Author(s)
      Yosuke Ogura
    • Journal Title

      Development

      Volume: 138 Pages: 577-587

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Ependymal cells of chordate larvae are stem-like cells that form the adult nervous system.2011

    • Author(s)
      Takeo Horie
    • Journal Title

      Nature

      Volume: 469 Pages: 525-528

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Efficient transposition of a single Minos transposon copy in the genome of the ascidian Ciona intestinalis with a transgenic line expressing transposase in eggs2010

    • Author(s)
      Akiko Hozumi, Narudo Kawai, Reiko Yoshida, Yosuke Ogura, Naoyuki Ohta, Honoo Satake, Nori Satoh, Yasunori Sasakura
    • Journal Title

      Developmental Dynamics 239巻

      Pages: 1076-1088

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Maternal factor-mediated epigenetic gene silencing in the ascidian Ciona intestinalis2010

    • Author(s)
      Yasunori Sasakura, Miho M. Suzuki, Akiko Hozumi, Kazuo Inaba, Nori Satoh
    • Journal Title

      Molecular Genetics and Genomics 283巻

      Pages: 99-110

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Transposon-mediated enhancer detection reveals the location, morphology and development of the cupular organs, which are putative hydrodynamic sensors, in the ascidian Ciona intestinalis.2010

    • Author(s)
      Naoyuki Ohta
    • Journal Title

      Zoological Science

      Volume: 27 Pages: 842-850

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Efficient transposition of a single Minos transposon copy in the genome of the ascidian Ciona intestinalis with a transgenic line expressing transposase in eggs.2010

    • Author(s)
      Akiko Hozumi
    • Journal Title

      Developmental Dynamics

      Volume: 239 Pages: 1076-1088

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Maternal factor-mediated epigenetic gene silencing in the ascidian Ciona intestinalis2010

    • Author(s)
      Yasunori Sasakura
    • Journal Title

      Molecular Genetics and Genomics 283

      Pages: 99-110

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Simple motor system of the ascidian larva neuronal complex comprising putative cholinergic and GABAergic/glycinergic neurons2010

    • Author(s)
      Takeo Horie
    • Journal Title

      Zoological Science 27

      Pages: 181-190

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Distribution and structural diversity of cilia in tadpole larvae of the ascidian Ciona intestinalis2010

    • Author(s)
      Alu Konno
    • Journal Title

      Developmental Biology 337

      Pages: 42-62

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Regeneration of oral siphon pigment organs in the ascidian Ciona intestinalis2010

    • Author(s)
      Helene Auger
    • Journal Title

      Developmental Biology 339

      Pages: 374-389

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Cell type and function of neurons in the ascidian nervous system2009

    • Author(s)
      Takeo Horie
    • Journal Title

      Development Growth and Differentiation 51

      Pages: 207-220

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Ciona intestinalis and Oxycomanthus japonicus, representatives of marine invertebrates2009

    • Author(s)
      Yasunori Sasakura
    • Journal Title

      Experimental Animals 58

      Pages: 459-469

    • NAID

      130000122256

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Delineating metamorphic pathways in the ascidian Ciona intestinalis2009

    • Author(s)
      A. Nakayama-Ishimura
    • Journal Title

      Developmental Biology 326

      Pages: 357-367

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Refining the Ciona intestinazs model of central nervous system regeneration2009

    • Author(s)
      C. Dahlberg
    • Journal Title

      PLOS ONE 4

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Presentation] 脊索動物ホヤの表皮においてレチノイン酸→Hox1カスケードはotic placode相同器官の形成に必須である2010

    • Author(s)
      笹倉靖徳、神田美幸、池田拓、堀江健生、河合成道、小椋陽介、吉田麗子、保住暁子、佐藤矩行、藤原滋樹
    • Organizer
      第33回日本分子生物学会年会
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2010-12-09
    • Related Report
      2010 Final Research Report
  • [Presentation] 脊索動物ホヤにおいてHox10は消化管形成に必要な内胚葉索の細胞移動を制御する2010

    • Author(s)
      河合成道
    • Organizer
      日本分子生物学会
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2010-12-09
    • Related Report
      2010 Annual Research Report
  • [Presentation] bHLH型転写因子Ptf1aはホヤ幼生においてドーパミン作動性ニューロンの分化に必須である2010

    • Author(s)
      堀江健生
    • Organizer
      日本分子生物学会
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2010-12-07
    • Related Report
      2010 Annual Research Report
  • [Presentation] カタユウレイボヤにおける母性mRNAの特異的ノックダウン技術の開発2010

    • Author(s)
      飯塚貴子、三田薫、濱田麻友子、佐藤矩行、笹倉靖徳
    • Organizer
      日本動物学会第81回大会
    • Place of Presentation
      東京大学
    • Year and Date
      2010-09-23
    • Related Report
      2010 Final Research Report
  • [Presentation] カタユウレイボヤにおける母性mRNAの特異的ノックダウン技術の開発2010

    • Author(s)
      飯塚貴子
    • Organizer
      日本動物学会
    • Place of Presentation
      東京大学教養学部
    • Year and Date
      2010-09-23
    • Related Report
      2010 Annual Research Report
  • [Presentation] 脊索動物ホヤの表皮においてレチノイン酸→Hox1カスケードはotic placode相同器官の形成に必須である2010

    • Author(s)
      笹倉靖徳
    • Organizer
      日本分子生物学会
    • Place of Presentation
      神戸ポートアイランド
    • Related Report
      2010 Annual Research Report
  • [Presentation] インビボイメージングによるカタユウレイボヤ胚発生過程における細胞周期進行パターンの解析2009

    • Author(s)
      小椋陽介
    • Organizer
      日本分子生物学会
    • Place of Presentation
      パシフィコ横浜(神奈川)
    • Year and Date
      2009-12-10
    • Related Report
      2009 Annual Research Report
  • [Presentation] 原始脊索動物カタユウレイボヤにおけるトランスポゾン技術の開発2009

    • Author(s)
      笹倉靖徳
    • Organizer
      日本遺伝学会
    • Place of Presentation
      信州大学(長野)
    • Year and Date
      2009-09-18
    • Related Report
      2009 Annual Research Report
  • [Presentation] Ptf1, a bHLH transcription factor, defines the dopaminergic neuronal Cell fate in ascidian larva2009

    • Author(s)
      Takeo Horie
    • Organizer
      5th international tunicate meeting
    • Place of Presentation
      沖縄産業支援センター(沖縄)
    • Year and Date
      2009-06-24
    • Related Report
      2009 Annual Research Report
  • [Presentation] Transposon-mediated enhancer trap revealed the functions of Hox1 during after metamorphosis2009

    • Author(s)
      笹倉靖徳
    • Organizer
      5th international tunicate meeting
    • Place of Presentation
      沖縄産業支援センター(沖縄)
    • Year and Date
      2009-06-22
    • Related Report
      2009 Annual Research Report
  • [Presentation] 脊索動物ホヤにおける母性因子を介した動遺伝子のサイレンシング2008

    • Author(s)
      笹倉靖徳
    • Organizer
      日本分子生物学会
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2008-12-11
    • Related Report
      2008 Annual Research Report
  • [Presentation] Developmental changes of nervous system during metamorphosis in the ascidian Ciona intestinalis2008

    • Author(s)
      堀江健生
    • Organizer
      日本発生生物学会
    • Place of Presentation
      徳島大学
    • Year and Date
      2008-06-30
    • Related Report
      2008 Annual Research Report
  • [Presentation] Developmental changes of nervous system during metamorphosis in the ascidian Ciona intestinalis2008

    • Author(s)
      Takeo Horie, Nori Satoh, Yasunori Sasakura
    • Organizer
      日太発生生物学会第41回大会
    • Place of Presentation
      徳島県郷土文化会館ホームページ
    • Year and Date
      2008-05-28
    • Related Report
      2010 Final Research Report
  • [Remarks] ヘームページ等

    • URL

      http://www.shimoda.tsukuba.ac.jp/~sasakura/index.html

    • Related Report
      2010 Final Research Report
  • [Remarks]

    • URL

      http://www.shimoda.tsukuba.ac.jp/~sasakura/index.html

    • Related Report
      2010 Annual Research Report
  • [Remarks]

    • URL

      http://www.shimoda.tsukuba.ac.jp/~jambio/ronbun.html

    • Related Report
      2010 Annual Research Report
  • [Remarks]

    • URL

      http://www.shimoda.tsukuba.ac.jp/~sasakura/index.html

    • Related Report
      2009 Annual Research Report

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Published: 2008-04-01   Modified: 2016-04-21  

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