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Development of a new analytical tool for elucidating nitrate signaling networks

Research Project

Project/Area Number 20770024
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Plant molecular biology/Plant physiology
Research InstitutionHokkaido University

Principal Investigator

GOTO Derek  Hokkaido University, 創成研究機構, 特任助教 (40419205)

Project Period (FY) 2008 – 2009
Project Status Completed (Fiscal Year 2009)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2009: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2008: ¥3,510,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥810,000)
Keywords植物 / 根 / 栄養応答 / 栄養輸送
Research Abstract

This project aimed to develop a new fluorescent indicator of changes in nitrate concentration within living plant roots. This indicator relies on Forster Resonance Energy Transfer (FRET) between two fluorescent proteins, such that a change in nitrate level is shown by a ratio change in emission from the two proteins.Synechococcus PCC 7924 cyanobacterium contains a high-affinity nitrate binding protein, NrtA, and the gene encoding this protein was used for the new indicator. After the NrtA was cloned into the appropriate vectors, the gene was fused between genes encoding CFP and YFP. The new fusion protein successfully showed FRET activity, and dual emission from both CFP and YFP when only the CFP protein was excited. A slight increase in the FRET ratio was also observed when the protein was exposed to higher nitrate concentrations. However, a high FRET ratio was present even at low nitrate levels, and the ratio increase was not enough for use in plants. Conserved residues in NrtA were identified and modified using site-directed mutagenesis. This successfully reduced the high initial FRET ratio but did not result in a greater nitrate response. Further optimization is expected to provide the new practical indicator for plant research.

Report

(3 results)
  • 2009 Annual Research Report   Final Research Report ( PDF )
  • 2008 Annual Research Report
  • Research Products

    (11 results)

All 2010 2009 2008 Other

All Presentation (8 results) Remarks (3 results)

  • [Presentation] Initiation of specialised nutrient transfer within plant roots by a sedentary parasite2010

    • Author(s)
      GOTO Derek
    • Organizer
      「International Symposium on Plant Membrane Transport」国際学会
    • Place of Presentation
      東京大学、東京
    • Year and Date
      2010-03-13
    • Related Report
      2009 Annual Research Report
  • [Presentation] Disruption of plant root function by a parasite : How do root-knot nematodes establish permanent infection sites inside plant roots?2010

    • Author(s)
      GOTO Derek
    • Organizer
      Australian Centre for Plant Functional Genomics
    • Place of Presentation
      University of Adelaide, AUSTRALIA
    • Year and Date
      2010-02-22
    • Related Report
      2009 Annual Research Report
  • [Presentation] トマトとイモムシの隠れた戦い2009

    • Author(s)
      Goto, D.
    • Organizer
      第5回北大-九大合同活動報告会
    • Place of Presentation
      東京、日本
    • Year and Date
      2009-12-10
    • Related Report
      2009 Final Research Report
  • [Presentation] トマトとイモムシの隠れた戦い2009

    • Author(s)
      GOTO Derek
    • Organizer
      第5回 北大-九大合同活動報告会
    • Place of Presentation
      東京
    • Year and Date
      2009-12-10
    • Related Report
      2009 Annual Research Report
  • [Presentation] Disruption of plant root function by a parasite: How do root-knot nematodes establish permanent infection sites inside plant roots?2009

    • Author(s)
      Goto, D.
    • Organizer
      Invited Seminar, Australian Centre for Plant Functional Genomics, University of Adelaide
    • Place of Presentation
      Adelaide, AUSTRALIA
    • Year and Date
      2009-02-22
    • Related Report
      2009 Final Research Report
  • [Presentation] Initiation of specialised nutrient transfer within plant roots by a sedentary parasite2009

    • Author(s)
      Goto, D.
    • Organizer
      International Symposium on Plant Membrane Transport
    • Place of Presentation
      東京大学、東京、日本
    • Related Report
      2009 Final Research Report
  • [Presentation] Investigating the establishment of the root-knot nematode interaction with plants2008

    • Author(s)
      Goto Derek
    • Organizer
      Workshop on Plant Pathology, Crop Improvement and Ecosystem Health
    • Place of Presentation
      Murdoch University, Australia
    • Year and Date
      2008-12-15
    • Related Report
      2008 Annual Research Report
  • [Presentation] Elucidating early events in root-knot nematode Parasitism2008

    • Author(s)
      Goto Derek
    • Organizer
      Japan-Australia Symposium on Biological interactions with plant roots and aerialtissues
    • Place of Presentation
      北海道大学
    • Year and Date
      2008-07-29
    • Related Report
      2008 Annual Research Report
  • [Remarks]

    • URL

      http://gotolab.cris.hokudai.ac.jp

    • Related Report
      2009 Final Research Report
  • [Remarks]

    • URL

      http://gotolab.cris.hokudai.ac.jp/

    • Related Report
      2009 Annual Research Report
  • [Remarks] Goto Laboratory

    • URL

      http://gotolab.cris.hokudai.ac.jp/main/Derek_Goto_Lab.html

    • Related Report
      2008 Annual Research Report

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Published: 2008-04-01   Modified: 2021-04-07  

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