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The structural biological study of the macromolecular complex involved with formation of SARS-CoV virions

Research Project

Project/Area Number 20770075
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Structural biochemistry
Research InstitutionHokkaido University

Principal Investigator

SAKAI Naoki  Hokkaido University, 大学院・先端生命科学研究院, 助教 (20422008)

Project Period (FY) 2008 – 2009
Project Status Completed (Fiscal Year 2009)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2009: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2008: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
Keywords構造生物学 / 蛋白質結晶学 / SARSコロナウイルス / X線結晶構造解析 / SARSコロナイルス
Research Abstract

The aim of this study is elucidating the molecular basis of budding of SARS coronavirus (SARS-CoV). In the initiation stage of a budding of virion from infected host cell, N protein and M protein are interacted. This interaction is considered as a trigger of budding of SARS-CoV. To obtain a detail of the molecular mechanism of this phenomenon, I tried to solve the crystal structure of the macromolecular complex of N and M proteins and established the preparation method of N protein.

Report

(3 results)
  • 2009 Annual Research Report   Final Research Report ( PDF )
  • 2008 Annual Research Report
  • Research Products

    (32 results)

All 2010 2009 2008

All Journal Article (6 results) (of which Peer Reviewed: 2 results) Presentation (26 results)

  • [Journal Article] 特集タンパク3000プロジェクトの産んだもの第I部成果とインパクト:個別的解析2008

    • Author(s)
      田中勲, 渡邉信久, 姚閔, 坂井直樹
    • Journal Title

      拠点の研究成果転写・翻訳翻訳系蛋白質を中心に蛋白質核酸酵素 2008年4月号

      Pages: 608-611

    • Related Report
      2009 Final Research Report
  • [Journal Article] Antimicrobial peptides in the gut innate immunity2008

    • Author(s)
      Naoki Sakai, Tokiyoshi Ayabe
    • Journal Title

      International Journal of Probiotics and prebiotics 3

      Pages: 123-126

    • Related Report
      2009 Final Research Report
  • [Journal Article] Crystal structure of SCO6571 from Streptomyces coelicolor A3(2)2008

    • Author(s)
      Begum Parvin, Naoki Sakai, Takeshi Hayashi, Gao Yung-gui, Tomohiro Tamura, Nobuhisa Watanabe, Min Yao, Isao Tanaka
    • Journal Title

      Protein Pept. Lett. 15(7)

      Pages: 709-712

    • Related Report
      2009 Final Research Report
  • [Journal Article] 特集タンパク3000プロジェクトの産んだもの第I部成果とインパクト : 個別的解析拠点の研究成果転写・翻訳翻訳系蛋白質を中心に2008

    • Author(s)
      田中勲, 渡邉信久, 姚〓, 坂井直樹
    • Journal Title

      蛋白質核酸酵素 53

      Pages: 608-611

    • Related Report
      2008 Annual Research Report
  • [Journal Article] Antimicrobial peptides in the gut innate immunity2008

    • Author(s)
      Naoki Sakai and Tokiyoshi Ayabe
    • Journal Title

      International Journal of Probiotics and prebiotics 3

      Pages: 123-126

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Crystal structure of SC06571 from Streptomyces coelicolor A3(2)2008

    • Author(s)
      Begum Parvin, Naoki Sakai, Takeshi Hayashi, Gao Yung-gui, Tomohiro Tamura, Nobuhisa Watanabe, Min Yao and Isao Tanaka
    • Journal Title

      Protein Pept. Lett 15

      Pages: 709-712

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Presentation] 活性酸素高拡散型蛍光蛋白質 KillerRed の結晶構造解析2010

    • Author(s)
      坂井直樹, 北郷悠, 竹本研, 松田知己, 綾部時芳, 永井健治
    • Organizer
      第27会PFシンポジウム
    • Place of Presentation
      つくば国際会議場
    • Year and Date
      2010-03-09
    • Related Report
      2009 Annual Research Report
  • [Presentation] 光増感蛍光蛋白質KillerRedの結晶構造解析2010

    • Author(s)
      坂井直樹, 北郷悠, 竹本研, 松田知己, 綾部時芳, 永井健治
    • Organizer
      2009年度日本生物物理学会北海道支部例会
    • Place of Presentation
      北海道大学理学部
    • Year and Date
      2010-03-08
    • Related Report
      2009 Final Research Report
  • [Presentation] 光増感蛍光蛋白質 KillerRed の結晶構造解析2010

    • Author(s)
      坂井直樹, 北郷悠, 竹本研, 松田知己, 綾部時芳, 永井健治
    • Organizer
      2009年度日本生物物理学会北海道支部例会
    • Place of Presentation
      北海道大学
    • Year and Date
      2010-03-08
    • Related Report
      2009 Annual Research Report
  • [Presentation] 活性酸素高拡散型蛍光蛋白質KillerRedの結晶構造解析2010

    • Author(s)
      坂井直樹, 北郷悠, 竹本研, 松田知己, 綾部時芳, 永井健治
    • Organizer
      第27会PFシンポジウム
    • Place of Presentation
      つくば国際会議場(つくば市)
    • Related Report
      2009 Final Research Report
  • [Presentation] The SNARE expression in mouse Panethcells in relation to secretory response2009

    • Author(s)
      明石裕行, 坂井直樹, 綾部時芳
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2009-12-12
    • Related Report
      2009 Annual Research Report
  • [Presentation] Identification of stellate cells in the mouse small intestine2009

    • Author(s)
      吉岡佐和子, 坂井直樹, 綾部時芳
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2009-12-11
    • Related Report
      2009 Annual Research Report
  • [Presentation] Regulation of the selective bactericidal activity of the mouse α-defensin, cryptdin-42009

    • Author(s)
      増田晃士, 坂井直樹, 綾部時芳
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2009-12-10
    • Related Report
      2009 Annual Research Report
  • [Presentation] Identification of a novel antimicrobial peptide derived from mouse-beta-defensin-like protein2009

    • Author(s)
      川口晶, 鈴木忠樹, 木村享史, 坂井直樹, 綾部時芳, 澤洋文, 長谷川秀樹
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2009-12-09
    • Related Report
      2009 Annual Research Report
  • [Presentation] 蛍光蛋白質 KillerRed のS-SAD法による結晶構造解析2009

    • Author(s)
      坂井直樹, 北郷悠, 竹本研, 松田知己, 永井建治
    • Organizer
      日本結晶学会2009年度年会
    • Place of Presentation
      関西学院大学西宮上ヶ原キャンパス
    • Year and Date
      2009-12-06
    • Related Report
      2009 Annual Research Report
  • [Presentation] マウスα-defensin, cryptdin-4のジスルフィド結合が殺菌活性に及ぼす影響2009

    • Author(s)
      増田晃士, 坂井直樹, 綾部時芳
    • Organizer
      第9回日本蛋白質科学会年会
    • Place of Presentation
      熊本全日空ホテルニュースカイ
    • Year and Date
      2009-05-20
    • Related Report
      2009 Annual Research Report 2009 Final Research Report
  • [Presentation] Regulated roles of Paneth cell a-defensin in mouse small intestine and its molecular mechanism of bactericidal activity2009

    • Author(s)
      Rie Fukaya, Koji Masuda, Naoki Sakai, Tokiyoshi Ayabe
    • Organizer
      Hokkaido University Mahidol University Joint Symposium
    • Place of Presentation
      北海道大学
    • Year and Date
      2009-05-13
    • Related Report
      2009 Annual Research Report
  • [Presentation] Identification of a novel antimicrobial peptide derived from mouse-beta-defensin-like protein2009

    • Author(s)
      川口晶, 鈴木忠樹, 木村享史, 坂井直樹, 綾部時芳, 澤洋文, 長谷川秀樹
    • Organizer
      第3 2回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2009 Final Research Report
  • [Presentation] Regulation of the selective bactericidal activity of the mouseα-defensin, cryptdin-42009

    • Author(s)
      増田晃士, 坂井直樹, 綾部時芳
    • Organizer
      第3 2回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2009 Final Research Report
  • [Presentation] 蛍光蛋白質KillerRedのS-SAD法による結晶構造解析2009

    • Author(s)
      坂井直樹, 北郷悠, 竹本研, 松田知己, 永井健治
    • Organizer
      日本結晶学会2009年度年会
    • Place of Presentation
      関西学院大学西宮上ヶ原キャンパス
    • Related Report
      2009 Final Research Report
  • [Presentation] Regulated roles of Paneth cell a-defensin in mouse small intestine and its molecular mechanism of bactericidal activity2009

    • Author(s)
      Rie Fukaya, Koji Masuda, Naoki Sakai, Tokiyoshi Ayabe
    • Organizer
      Hokkaido University Mahidol University Joint Symposium
    • Place of Presentation
      Hokkaido University, Japan
    • Related Report
      2009 Final Research Report
  • [Presentation] 小腸上皮におけるセロトニンおよびセロトニン受容体の発現解析2008

    • Author(s)
      遠藤優子, 坂井直樹, 綾部時芳
    • Organizer
      第31回日本分子生物学会年会(第81回日本生化学会大会と合同年会)
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2008-12-12
    • Related Report
      2008 Annual Research Report
  • [Presentation] 新規創製した蛍光ソルバトクロミック色素プローブを用いた細胞膜ダイナミクス解析2008

    • Author(s)
      阿部悠子, 山田幸司, 坂井直樹, 坂入信夫, 綾部時芳
    • Organizer
      第31回日本分子生物学会年会(第81回日本生化学会大会と合同年会)
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2008-12-09
    • Related Report
      2008 Annual Research Report
  • [Presentation] マウスαデフェンシン, cryptdin4の殺微生物作用の分子機構2008

    • Author(s)
      増田晃士, 坂井直樹, 綾部時芳
    • Organizer
      日本生物物理学会第46回年会
    • Place of Presentation
      福岡国際会議場
    • Year and Date
      2008-12-04
    • Related Report
      2008 Annual Research Report
  • [Presentation] Regulated roles of Paneth cell a-defensin in mouse small intestine and its molecular mechanism of bactericidal activity2008

    • Author(s)
      Naoki Sakai
    • Organizer
      Regulation in Innate Immunity, from Recognition Molecules to Antimicrobial Peptides
    • Place of Presentation
      北海道大学
    • Year and Date
      2008-10-29
    • Related Report
      2008 Annual Research Report
  • [Presentation] The structural property in bactericidal activities of mouse a-defensin, cryptdin-42008

    • Author(s)
      Koji Masuda, Naoki Sakai, Tokiyoshi Ayabe
    • Organizer
      第8回あわじしま感染症・免疫フォーラム
    • Place of Presentation
      淡路夢舞台国際会議場
    • Year and Date
      2008-09-07
    • Related Report
      2008 Annual Research Report
  • [Presentation] Crystal structure analysis of the oligo-peptide binding protein OppA complexed with peptides2008

    • Author(s)
      Naoki Sakai, Ayane Morita, Yukako Ushijima, MM Yao, Nobuhisa Watanabe and Isao Tanaka
    • Organizer
      XXI Congress of the International Union of Crystallography
    • Place of Presentation
      大阪国際会議場
    • Year and Date
      2008-08-28
    • Related Report
      2008 Annual Research Report
  • [Presentation] バネト細胞α-defensinと腸内自然免疫 : クローン病との関わりを含めて2008

    • Author(s)
      綾部時芳, 深谷梨恵, 坂井直樹, 前本篤男, 藍田知史, 河野透, 田邊裕貴, 高後裕
    • Organizer
      自然免疫の最前線-3学会合同大会2008-, 第73回日本インターフェロン・サイトカイン学会学術集会, 第19回日本生体防御学会学術総会, 第45回補体シンポジウム
    • Place of Presentation
      北海道大学
    • Year and Date
      2008-07-10
    • Related Report
      2008 Annual Research Report
  • [Presentation] マウスαデフェンシン, cryptdin4の殺微生物作用の分子機構2008

    • Author(s)
      増田晃士, 坂井直樹, 綾部時芳
    • Organizer
      日本生物物理学会第4 6回年会
    • Place of Presentation
      福岡国際会議場
    • Related Report
      2009 Final Research Report
  • [Presentation] Regulated roles of Paneth cell a-defensin in mouse small intestine and its molecular mechanism of bactericidal activity Regulation in Innate Immunity2008

    • Author(s)
      Naoki Sakai
    • Organizer
      Recognition Molecules to Antimicrobial Peptides
    • Place of Presentation
      Hokkaido University, Japan
    • Related Report
      2009 Final Research Report
  • [Presentation] The structural property in bactericidal activities of mouseα-defensin, cryptdin-42008

    • Author(s)
      Koji Masuda, Naoki Sakai, Tokiyoshi Ayabe
    • Organizer
      第8回あわじしま感染症・免疫フォーラム
    • Place of Presentation
      淡路夢舞台国際会議場
    • Related Report
      2009 Final Research Report
  • [Presentation] Crystal structure analysis of the oligo-peptide binding protein OppA complexed with peptides2008

    • Author(s)
      Naoki Sakai, Ayane Morita, Yukako Ushijima, Min Yao, Nobuhisa Watanabe, Isao Tanaka
    • Organizer
      XXI Congress of the International Union of Crystallography
    • Place of Presentation
      Osaka, Japan
    • Related Report
      2009 Final Research Report

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Published: 2008-04-01   Modified: 2016-04-21  

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