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Comprehensive analysis of membrane protein interactions by using in vivo photo-cross-linking technology.

Research Project

Project/Area Number 20770148
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Molecular biology
Research InstitutionThe Institute of Physical and Chemical Research

Principal Investigator

HINO Nobumasa  The Institute of Physical and Chemical Research, 拡張遺伝暗号システム研究チーム, 研究員 (90469916)

Project Period (FY) 2008 – 2009
Project Status Completed (Fiscal Year 2009)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2009: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2008: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywords蛋白質間相互作用 / 膜タンパク質 / クロスリンク / 拡張遺伝暗号 / 非天然型アミノ酸 / タンパク質問相互作用 / GPCR / RAMP / 質量分析 / プロテオミクス
Research Abstract

To investigate the in vivo interaction between GPCRs and membrane proteins by a photo-cross-linking approach, a cross-linkable, non-natural amino acid was site-specifically incorporated at various positions of the extra-cellular domain of receptor-activity modified protein 1 (RAMP1) in mammalian cells. By exposing the cells to the light at 365 nm, the RAMP1 variants, each containing the non-natural amino acid at a specific site, were found to be efficiently cross-linked with the calcitonin receptor-like receptor, which is a GPCR known to interact with RAMP1. These variants were able to be cross-linked also with another GPCR, the calcitonin receptor. This observation revealed that RAMP1 binds to these different types of GPCRs directly, and the binding mode hardly changes, depending on the type of GPCR.

Report

(3 results)
  • 2009 Annual Research Report   Final Research Report ( PDF )
  • 2008 Annual Research Report
  • Research Products

    (3 results)

All 2008 Other

All Presentation (2 results) Remarks (1 results)

  • [Presentation] ,タンパク質の特定のモチーフを介するタンパク質間相互作用の細胞内光クロスリンク法による網羅的解析2008

    • Author(s)
      樋野 展正
    • Organizer
      第31回日本分子生物学会年会
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2008-12-12
    • Related Report
      2009 Final Research Report
  • [Presentation] タンパク質の特定のモチーフを介するタンパク質問相互作用の細胞内光クロスリンク法による網羅的解析2008

    • Author(s)
      樋野展正
    • Organizer
      BMB2008(第31回日本分子生物学会年会)
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2008-12-12
    • Related Report
      2008 Annual Research Report
  • [Remarks]

    • URL

      http://protein.gsc.riken.jp/sakamoto

    • Related Report
      2009 Final Research Report

URL: 

Published: 2008-04-01   Modified: 2016-04-21  

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